Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p47410 Brassica napus
A07p11210 Brassica napus
A08p02880 Brassica napus
A08p25510 Brassica napus
A09p37620 Brassica napus
Aa31LG5G3060 Aethionema arabicum
Aa31LG6G10940 Aethionema arabicum
Aa31sc565G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.274 Anthoceros agrestis
Actinidia03300 Actinidia chinensis
Actinidia06779 Actinidia chinensis
Actinidia07602 Actinidia chinensis
Actinidia07830 Actinidia chinensis
Actinidia10999 Actinidia chinensis
Actinidia11000 Actinidia chinensis
Actinidia11111 Actinidia chinensis
Actinidia11112 Actinidia chinensis
Actinidia26141 Actinidia chinensis
Actinidia39477 Actinidia chinensis
Actinidia39478 Actinidia chinensis
Ah.04g162790 Amaranthus hybridus
AL1G42050 Arabidopsis lyrata
AL8G15840 Arabidopsis lyrata
AL9U11900 Arabidopsis lyrata
Aqoxy1G03116 Aquilegia oxysepala
Aqoxy4G00628 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0SQJ2Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1H2VR5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.31J8XM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.49JRJ0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CH5A50 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DG2K05 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G6BTL7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P48F6M Arachis hypogaea
AT1G28420 Arabidopsis thaliana
AT4G12750 Arabidopsis thaliana
AT5G44180 Arabidopsis thaliana
ATR0730G134 Amborella trichopoda
ATR1098G049 Amborella trichopoda
Atru.chr10.1798 Acer truncatum
Atru.chr6.2869 Acer truncatum
Atru.chr6.3472 Acer truncatum
AUR62035538 Chenopodium quinoa
AUR62036057 Chenopodium quinoa
AUR62037546 Chenopodium quinoa
AUR62038987 Chenopodium quinoa
BcaB03g12103 Brassica carinata
BcaB04g17209 Brassica carinata
BcaB07g33517 Brassica carinata
BcaC01g00060 Brassica carinata
BcaC01g01268 Brassica carinata
BcaC02g08708 Brassica carinata
BcaC05g26861 Brassica carinata
BcaC06g31644 Brassica carinata
BcaC06g34584 Brassica carinata
BcaC06g35369 Brassica carinata
BcaNung02981 Brassica carinata
BolC3t19784H Brassica oleracea
BolC3t21320H Brassica oleracea
BolC5t31459H Brassica oleracea
BolC7t42194H Brassica oleracea
BolC7t43215H Brassica oleracea
BraA06t27612Z Brassica rapa
BraA07t28913Z Brassica rapa
BraA08t32320Z Brassica rapa
BraA08t34505Z Brassica rapa
BraA09t39272Z Brassica rapa
C03p75250 Brassica napus
C03p90000 Brassica napus
C04p51450 Brassica napus
C05p27430 Brassica napus
C07p16880 Brassica napus
C07p26860 Brassica napus
CAN.G1256.6 Capsicum annuum
CAN.G209.1 Capsicum annuum
CAN.G529.57 Capsicum annuum
CANSAT35G2047 Cannabis sativa
CANSAT56G1506 Cannabis sativa
CANSAT56G2417 Cannabis sativa
CANSAT64G0141 Cannabis sativa
CARHR027930 Cardamine hirsuta
CARHR179080 Cardamine hirsuta
CARHR218110 Cardamine hirsuta
Carub.0001s2690 Capsella rubella
Carub.0007s3007 Capsella rubella
Carub.0008s0434 Capsella rubella
Ca_00363_v3 Cicer arietinum L.
Ca_17413_v3 Cicer arietinum L.
Ca_18589_v3 Cicer arietinum L.
Ca_18919_v3 Cicer arietinum L.
CBR_g17700 Chara braunii
Cc02_g09100 Coffea canephora
Cc02_g13850 Coffea canephora
Cc05_g07750 Coffea canephora
CDE01G0356 Ceratophyllum demersum
CDE02G2880 Ceratophyllum demersum
CDE02G3848 Ceratophyllum demersum
CDE10G0226 Ceratophyllum demersum
CDE10G0974 Ceratophyllum demersum
CDE10G1047 Ceratophyllum demersum
CDE10G1054 Ceratophyllum demersum
Cfa000527 Carpinus fangiana
Cfa002303 Carpinus fangiana
Cfa002900 Carpinus fangiana
Cfa014661 Carpinus fangiana
Ciclev10014022m.g Citrus clementina
Ciclev10014023m.g Citrus clementina
Ciclev10014094m.g Citrus clementina
Ciclev10015005m.g Citrus clementina
Ciclev10017580m.g Citrus clementina
Ciclev10018240m.g Citrus clementina
CiPaw.03G181600 Carya illinoinensis
CiPaw.04G180000 Carya illinoinensis
CiPaw.04G180100 Carya illinoinensis
CiPaw.07G090300 Carya illinoinensis
CiPaw.09G063400 Carya illinoinensis
ClCG00G004780 Citrullus lanatus
ClCG01G023260 Citrullus lanatus
ClCG09G010560 Citrullus lanatus
COL.COLO4_19723 Corchorus olitorius
COL.COLO4_31415 Corchorus olitorius
Cpa.g.sc27.2 Carica papaya
Cpa.g.sc27.3 Carica papaya
Cpa.g.sc8.11 Carica papaya
Cpa.g.sc83.96 Carica papaya
Cpa.g.sc83.97 Carica papaya
Cre03.g174500 Chlamydomonas reinhardtii
CsaV3_5G020680 Cucumis sativus L.
CsaV3_6G050410 Cucumis sativus L.
CsaV3_7G023680 Cucumis sativus L.
CSS0016347 Camellia sinensis var. sinensis
CSS0026010 Camellia sinensis var. sinensis
CSS0043150 Camellia sinensis var. sinensis
CSS0047003 Camellia sinensis var. sinensis
DCAR_004044 Daucus carota
DCAR_007998 Daucus carota
DCAR_021265 Daucus carota
DCAR_028055 Daucus carota
DCAR_028382 Daucus carota
Dinv05740 Davidia involucrata
Dinv05741 Davidia involucrata
Dinv05742 Davidia involucrata
Dinv06859 Davidia involucrata
Dinv17354 Davidia involucrata
Dinv29934 Davidia involucrata
Dinv30126 Davidia involucrata
Duzib132G0536 Durio zibethinus
Duzib133G1111 Durio zibethinus
Duzib138G1511 Durio zibethinus
Duzib160G0499 Durio zibethinus
Duzib235G0176 Durio zibethinus
ECA238G3650 Erigeron canadensis
EL10Ac4g08849 Beta vulgaris
EL10Ac9g20819 Beta vulgaris
Eucgr.D00596 Eucalyptus grandis
Eucgr.K01058 Eucalyptus grandis
Eucgr.K01361 Eucalyptus grandis
FAN02G0189 Fragaria x ananassa
FAN02G3093 Fragaria x ananassa
FAN05G2787 Fragaria x ananassa
FAN05G3838 Fragaria x ananassa
FAN09G0293 Fragaria x ananassa
FAN09G0796 Fragaria x ananassa
FAN11G1486 Fragaria x ananassa
FAN12G1448 Fragaria x ananassa
FAN12G4075 Fragaria x ananassa
FAN14G5546 Fragaria x ananassa
FAN14G5737 Fragaria x ananassa
FAN14G5823 Fragaria x ananassa
FAN16G2831 Fragaria x ananassa
FAN21G0276 Fragaria x ananassa
FAN25G1066 Fragaria x ananassa
FvH4_3g08620 Fragaria vesca
FvH4_4g09960 Fragaria vesca
FvH4_6g26700 Fragaria vesca
FvH4_6g36260 Fragaria vesca
Glyma.05G221500 Glycine max
Glyma.06G288900 Glycine max
Glyma.07G201200 Glycine max
Glyma.08G028000 Glycine max
Glyma.13G175200 Glycine max
Glyma.13G235300 Glycine max
Gohir.A06G211600 Gossypium hirsutum
Gohir.A06G211700 Gossypium hirsutum
Gohir.A11G145900 Gossypium hirsutum
Gohir.A12G139300 Gossypium hirsutum
Gohir.D06G209500 Gossypium hirsutum
Gohir.D06G209600 Gossypium hirsutum
Gohir.D11G152000 Gossypium hirsutum
Gohir.D12G143800 Gossypium hirsutum
Gorai.007G162700 Gossypium raimondii
Gorai.008G155100 Gossypium raimondii
Gorai.010G243500 Gossypium raimondii
Gorai.010G256900 Gossypium raimondii
GSVIVG01020605001 Vitis vinifera
GSVIVG01021113001 Vitis vinifera
GSVIVG01036776001 Vitis vinifera
HanXRQChr03g0072381 Helianthus annuus
HanXRQChr04g0117141 Helianthus annuus
HanXRQChr07g0200581 Helianthus annuus
HanXRQChr14g0455641 Helianthus annuus
HanXRQChr15g0469531 Helianthus annuus
HanXRQChr15g0481491 Helianthus annuus
HanXRQChr17g0554611 Helianthus annuus
Haze_06382 Corylus avellana
Haze_13244 Corylus avellana
Haze_24510 Corylus avellana
Hma1.2p1_0345F.1_g131230 Hydrangea macrophylla
Hma1.2p1_0345F.1_g131250 Hydrangea macrophylla
Hma1.2p1_0558F.1_g178470 Hydrangea macrophylla
Hma1.2p1_1100F.1_g257130 Hydrangea macrophylla
HPP92_023234 Vanilla planifolia
HPP92_023235 Vanilla planifolia
HPP92_023277 Vanilla planifolia
HPP92_023278 Vanilla planifolia
HPP92_025328 Vanilla planifolia
HPP92_025329 Vanilla planifolia
Hund01014 Selenicereus undatus
Hund07869 Selenicereus undatus
Hund22225 Selenicereus undatus
Lalb_Chr05g0223731 Lupinus albus
Lalb_Chr09g0331921 Lupinus albus
Lalb_Chr15g0089681 Lupinus albus
Lalb_Chr16g0384011 Lupinus albus
Lalb_Chr18g0059381 Lupinus albus
Lalb_Chr20g0121581 Lupinus albus
Lj1C693T2 Lonicera japonica
Lj1C693T3 Lonicera japonica
Lj1C693T4 Lonicera japonica
Lj1C697G7 Lonicera japonica
Lj2A362T44 Lonicera japonica
Lj2C292T8 Lonicera japonica
Lj2C38G11 Lonicera japonica
Lj2C38T11 Lonicera japonica
Lj3g0019816 Lotus japonicus
Lj4g0015660 Lotus japonicus
Lj4g0024460 Lotus japonicus
Lj6g0010323 Lotus japonicus
Lsat_1_v5_gn_2_107580 Lactuca sativa
Lsat_1_v5_gn_6_65401 Lactuca sativa
Lsat_1_v5_gn_7_22781 Lactuca sativa
Lsat_1_v5_gn_8_133600 Lactuca sativa
Lsat_1_v5_gn_9_26120 Lactuca sativa
Manes.12G058700 Manihot esculenta
Manes.13G141800 Manihot esculenta
Manes.17G049300 Manihot esculenta
Mapoly0005s0159 Marchantia polymorpha
MBI18_g11240_MAGBIO Magnolia biondii
MCO02G503 Micromonas commoda
MCO06G017 Micromonas commoda
MD05G1310200 Malus domestica
MD09G1170800 Malus domestica
MD10G1289100 Malus domestica
MD17G1156400 Malus domestica
Medtr2g014490 Medicago truncatula
Medtr4g078860 Medicago truncatula
Medtr4g088375 Medicago truncatula
MELO3C007260.2 Cucumis melo
MELO3C024106.2 Cucumis melo
Migut.F00815 Erythranthe guttata
Migut.H01470 Erythranthe guttata
Migut.M01107 Erythranthe guttata
MSTRG.14322 Avicennia marina
MSTRG.7359 Avicennia marina
MSTRG.9006 Avicennia marina
MSTRG.9529 Avicennia marina
Nitab4.5_0000621g0070 Nicotiana tabacum
Nitab4.5_0001955g0100 Nicotiana tabacum
Nitab4.5_0003799g0010 Nicotiana tabacum
Nitab4.5_0004359g0020 Nicotiana tabacum
Nitab4.5_0005191g0050 Nicotiana tabacum
Nitab4.5_0005417g0010 Nicotiana tabacum
Nn1g04237 Nelumbo nucifera
Nn1g06413 Nelumbo nucifera
Nn4g24992 Nelumbo nucifera
Nn5g28132 Nelumbo nucifera
Nn5g28133 Nelumbo nucifera
Oeu012153.2 Olea europaea
Oeu012227.1 Olea europaea
Oeu016006.1 Olea europaea
Oeu016007.1 Olea europaea
Oeu016030.1 Olea europaea
Oeu056520.3 Olea europaea
Os01g0672201 Oryza sativa ssp. japonica
Os01g0672300 Oryza sativa ssp. japonica
Os05g0562400 Oryza sativa ssp. japonica
Os07g0619600 Oryza sativa ssp. japonica
Peaxi162Scf00120g00521 Petunia axillaris
Peaxi162Scf00845g00120 Petunia axillaris
Peaxi162Scf00926g00006 Petunia axillaris
Peaxi162Scf01018g00118 Petunia axillaris
PGR004G2384 Punica granatum
PGR044G2616 Punica granatum
PGR142G1802 Punica granatum
PGSC0003DMG400000999 Solanum tuberosum
PGSC0003DMG400009397 Solanum tuberosum
PGSC0003DMG400031766 Solanum tuberosum
Phvul.002G232200 Phaseolus vulgaris
Phvul.002G303200 Phaseolus vulgaris
Phvul.006G182000 Phaseolus vulgaris
Potri.004G048675 Populus trichocarpa
Potri.007G135500 Populus trichocarpa
Potri.011G057700 Populus trichocarpa
Potri.014G173300 Populus trichocarpa
Potri.017G016200 Populus trichocarpa
Pp3c15_13310 Physcomitrium patens
Pp3c16_15110 Physcomitrium patens
Pp3c16_15118 Physcomitrium patens
Pp3c9_18520 Physcomitrium patens
Prupe.3G029100 Prunus persica
Prupe.3G029400 Prunus persica
Prupe.4G052600 Prunus persica
Psat0s3732g0080 Pisum sativum
Psat1g202960 Pisum sativum
Psat1g203000 Pisum sativum
Psat2g060720 Pisum sativum
Psat6g093800 Pisum sativum
Psat7g021400 Pisum sativum
Psat7g116080 Pisum sativum
Psat7g167560 Pisum sativum
Psat7g201640 Pisum sativum
Psat7g201720 Pisum sativum
PSO063G6089 Papaver somniferum
PSO210G6356 Papaver somniferum
PSO782G0625 Papaver somniferum
PSO832G3479 Papaver somniferum
QL04p042996 Quercus lobata
QL04p082212 Quercus lobata
QL05p042276 Quercus lobata
QL05p042429 Quercus lobata
QL08p040227 Quercus lobata
QL08p040265 Quercus lobata
QL11p007061 Quercus lobata
RcHm_v2.0_Chr2g0127081 Rosa chinensis
RcHm_v2.0_Chr2g0127091 Rosa chinensis
RcHm_v2.0_Chr2g0148261 Rosa chinensis
RcHm_v2.0_Chr4g0406751 Rosa chinensis
RcHm_v2.0_Chr5g0009221 Rosa chinensis
Rhsim02G0134900 Rhododendron simsii
Rhsim06G0136900 Rhododendron simsii
Rhsim09G0138700 Rhododendron simsii
RhsimUnG0013600 Rhododendron simsii
Sabra04G0030600 Salix brachista
Sabra07G0109800 Salix brachista
Sabra11G0039900 Salix brachista
Sabra14G0132600 Salix brachista
Sabra17G0012700 Salix brachista
SalBow3G1926 Salvia bowleyana
SalBow3G2022 Salvia bowleyana
SalBow7G2291 Salvia bowleyana
Sc09g0004660 Simmondsia chinensis
Sc12g0003230 Simmondsia chinensis
Sed0000156 Sechium edule
Sed0010792 Sechium edule
Sed0014026 Sechium edule
SEGI_01020 Sequoiadendron giganteum
SEGI_12627 Sequoiadendron giganteum
SEGI_13942 Sequoiadendron giganteum
SEGI_16610 Sequoiadendron giganteum
SEGI_19944 Sequoiadendron giganteum
SEGI_20521 Sequoiadendron giganteum
SEGI_28384 Sequoiadendron giganteum
SEGI_30380 Sequoiadendron giganteum
SEGI_31911 Sequoiadendron giganteum
SEGI_39795 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07637 Striga asiatica
SGA_v2.0_scaffold22G09664 Striga asiatica
SGA_v2.0_scaffold34G13921 Striga asiatica
SGA_v2.0_scaffold70G23491 Striga asiatica
SHI01532 Sapria himalayana
SHI01533 Sapria himalayana
SHI01534 Sapria himalayana
SHI01535 Sapria himalayana
SHI10198 Sapria himalayana
SMO228G0061 Selaginella moellendorffii
SMO228G0122 Selaginella moellendorffii
SMO337G0095 Selaginella moellendorffii
Solyc02g077660.3 Solanum lycopersicum
Solyc07g053610.3 Solanum lycopersicum
Solyc11g006200.2 Solanum lycopersicum
Sopen02g022560 Solanum pennellii
Sopen07g027560 Solanum pennellii
Sopen11g002130 Solanum pennellii
Sp1g24700 Schrenkiella parvula
Sp2g09000 Schrenkiella parvula
Sp7g09140 Schrenkiella parvula
TAR375G1143 Trochodendron aralioides
TAR626G0101 Trochodendron aralioides
TAR626G0121 Trochodendron aralioides
TAR627G0298 Trochodendron aralioides
THA.LOC104801160 Tarenaya hassleriana
THA.LOC104812616 Tarenaya hassleriana
THA.LOC104814231 Tarenaya hassleriana
THA.LOC104815378 Tarenaya hassleriana
THA.LOC104826040 Tarenaya hassleriana
THA.LOC104826638 Tarenaya hassleriana
Thecc.01G203900 Theobroma cacao
Thecc.02G186300 Theobroma cacao
Thecc.06G181000 Theobroma cacao
Thhalv10003131m.g Eutrema salsugineum
Thhalv10003435m.g Eutrema salsugineum
Thhalv10006543m.g Eutrema salsugineum
Thhalv10024262m.g Eutrema salsugineum
TPR.G11655 Trifolium pratense
TPR.G19912 Trifolium pratense
TPR.G22823 Trifolium pratense
TPR.G9356 Trifolium pratense
TWI14G1311 Tripterygium wilfordii
TWI18G1300 Tripterygium wilfordii
TWI23G0951 Tripterygium wilfordii
TWI36G0060 Tripterygium wilfordii
TWI38G1102 Tripterygium wilfordii
TWI38G1950 Tripterygium wilfordii
unitig_27.g24975 Utricularia gibba
unitig_37.g12875 Utricularia gibba
unitig_37.g12876 Utricularia gibba
unitig_46.g18727 Utricularia gibba
vmacro10348 Vaccinium macrocarpon
vmacro12346 Vaccinium macrocarpon
vmacro15932 Vaccinium macrocarpon
VMungo0251G2358 Vigna mungo
VMungo0251G2748 Vigna mungo
VMungo0251G2955 Vigna mungo
VMungo0540G1437 Vigna mungo
VMungo1127G0214 Vigna mungo
Zm00001eb061430 Zea mays
Zm00001eb153390 Zea mays
Zm00001eb157190 Zea mays
Zm00001eb157200 Zea mays
Zm00001eb157210 Zea mays
Zm00001eb157220 Zea mays
Zm00001eb157230 Zea mays
Zm00001eb295800 Zea mays
Zm00001eb343660 Zea mays
Zm00001eb359990 Zea mays
Zm00001eb423620 Zea mays
Zm00001eb423630 Zea mays

User provided reference genes

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