Gene: Sopen07g027560

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g027560
  • Transcript Identifier Sopen07g027560.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 73231768-73247646 : positive

Gene Family Information

  • ID HOM05D001439
  • #Genes/#Species 437/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g027560.1

Descriptions

  • Description Homeodomain-like transcriptional regulator | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: DDT domain superfamily , Homeobox , DDT domain , Homeodomain-like , DDT domain, subgroup , Homeodomain-related | BEST Arabidopsis thaliana protein match is: homeobox-1 .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G44180
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT5G44180

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G44180
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G44180

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G44180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007759 ASXL, HARE-HTH domain
IPR044977 Homeobox-DDT domain protein RLT1/2/3
IPR018501 DDT domain
IPR001356 Homeobox domain
IPR028941 WHIM2 domain
IPR028942 WHIM1 domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
12.4.2.3.1 Chromatin organisation.nucleosome remodeling.ISWI chromatin remodeling complexes.ISWI-CRA complex.component RINGLET/RLT