Gene: AT4G12750

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G12750
  • Transcript Identifier AT4G12750.1
  • Gene Type Coding gene
  • Location Chr4 : 7498009-7503920 : negative

Gene Family Information

  • ID HOM05D001439
  • #Genes/#Species 437/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G12750.1
  • uniprot F4JRF5

Descriptions

  • Description Homeodomain-like transcriptional regulator
  • Computational description Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 164 Blast hits to 146 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 152; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0009908
IEA
GOA Databaseflower development
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific1
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding1
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005667
IBA
Gene Ontologytranscription regulator complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR009057 Homeobox-like domain superfamily
IPR007759 ASXL, HARE-HTH domain
IPR044977 Homeobox-DDT domain protein RLT1/2/3
IPR018501 DDT domain
IPR028942 WHIM1 domain
IPR028941 WHIM2 domain
Mapman id Description
35.1 not assigned.annotated