Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p04560 Brassica napus
A03p08570 Brassica napus
A03p10380 Brassica napus
A03p33420 Brassica napus
A10p19050 Brassica napus
A10p21560 Brassica napus
Aa31LG11G11620 Aethionema arabicum
Aa31LG1G13750 Aethionema arabicum
Aa31LG4G14260 Aethionema arabicum
Aa31LG5G14330 Aethionema arabicum
Aa31LG7G13820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2404 Anthoceros agrestis
Actinidia03939 Actinidia chinensis
Actinidia06202 Actinidia chinensis
Actinidia07959 Actinidia chinensis
Actinidia10600 Actinidia chinensis
Actinidia12896 Actinidia chinensis
Actinidia37800 Actinidia chinensis
Actinidia37801 Actinidia chinensis
Ah.12g059740 Amaranthus hybridus
Ah.12g059780 Amaranthus hybridus
Ah.15g099180 Amaranthus hybridus
AL1G51400 Arabidopsis lyrata
AL3G13610 Arabidopsis lyrata
AL6G29020 Arabidopsis lyrata
AL6G32550 Arabidopsis lyrata
Aqoxy2G00595 Aquilegia oxysepala
Aqoxy2G00600 Aquilegia oxysepala
Aqoxy3G00741 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0A1TZX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.290HVK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.71Q3SD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.84QHVJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E5AZB0 Arachis hypogaea
AT3G03780 Arabidopsis thaliana
AT5G17920 Arabidopsis thaliana
AT5G20980 Arabidopsis thaliana
ATR0697G025 Amborella trichopoda
ATR1120G056 Amborella trichopoda
Atru.chr11.593 Acer truncatum
Atru.chr2.1465 Acer truncatum
Atru.chr3.3018 Acer truncatum
Atru.chr3.3021 Acer truncatum
Atru.chr3.521 Acer truncatum
Atru.chr3.522 Acer truncatum
Atru.chr3.523 Acer truncatum
Atru.chr3.524 Acer truncatum
Atru.chr4.1406 Acer truncatum
Atru.chr5.2553 Acer truncatum
Atru.chr5.2554 Acer truncatum
Atru.chr5.2564 Acer truncatum
Atru.chr7.185 Acer truncatum
AUR62001595 Chenopodium quinoa
AUR62014864 Chenopodium quinoa
AUR62020185 Chenopodium quinoa
AUR62036261 Chenopodium quinoa
AUR62039712 Chenopodium quinoa
AUR62040377 Chenopodium quinoa
AUR62041325 Chenopodium quinoa
AUR62042673 Chenopodium quinoa
BcaB01g03705 Brassica carinata
BcaB01g04924 Brassica carinata
BcaB01g05165 Brassica carinata
BcaB01g06401 Brassica carinata
BcaB04g19355 Brassica carinata
BcaB05g23292 Brassica carinata
BcaB08g36724 Brassica carinata
BcaB08g37327 Brassica carinata
BcaB08g37329 Brassica carinata
BcaC01g04391 Brassica carinata
BcaC03g13558 Brassica carinata
BcaC04g18740 Brassica carinata
BcaC04g19496 Brassica carinata
BcaC05g29907 Brassica carinata
BcaNung05753 Brassica carinata
BcaNung06306 Brassica carinata
BolC2t06855H Brassica oleracea
BolC3t13487H Brassica oleracea
BolC3t13662H Brassica oleracea
BolC3t16328H Brassica oleracea
BolC5t34982H Brassica oleracea
BolC9t58371H Brassica oleracea
BolC9t58753H Brassica oleracea
BraA02t05417Z Brassica rapa
BraA03t10182Z Brassica rapa
BraA03t10350Z Brassica rapa
BraA03t12518Z Brassica rapa
BraA10t43983Z Brassica rapa
BraA10t43984Z Brassica rapa
BraA10t44217Z Brassica rapa
C02p09490 Brassica napus
C03p10010 Brassica napus
C03p11920 Brassica napus
C03p40630 Brassica napus
C05p63200 Brassica napus
C09p55070 Brassica napus
C09p59050 Brassica napus
CAN.G128.147 Capsicum annuum
CAN.G128.161 Capsicum annuum
CAN.G128.162 Capsicum annuum
CAN.G794.13 Capsicum annuum
CANSAT54G0038 Cannabis sativa
CANSAT54G0512 Cannabis sativa
CANSAT54G0841 Cannabis sativa
CANSAT54G1056 Cannabis sativa
CANSAT54G2943 Cannabis sativa
CANSAT78G0630 Cannabis sativa
CARHR077850 Cardamine hirsuta
CARHR191860 Cardamine hirsuta
CARHR195200 Cardamine hirsuta
Carub.0003s0295 Capsella rubella
Carub.0006s1613 Capsella rubella
Carub.0006s1930 Capsella rubella
Ca_08271_v3 Cicer arietinum L.
Ca_08294_v3 Cicer arietinum L.
Ca_16262_v3 Cicer arietinum L.
Ca_25689_v3 Cicer arietinum L.
Ca_29913_v3 Cicer arietinum L.
Cc06_g07310 Coffea canephora
CDE04G1980 Ceratophyllum demersum
CDE07G1296 Ceratophyllum demersum
CDE10G0262 Ceratophyllum demersum
CDE10G0433 Ceratophyllum demersum
CDE10G1315 Ceratophyllum demersum
Cfa010241 Carpinus fangiana
Cfa010242 Carpinus fangiana
Cfa017594 Carpinus fangiana
Cfa017690 Carpinus fangiana
Cfa022322 Carpinus fangiana
Ciclev10014233m.g Citrus clementina
Ciclev10018921m.g Citrus clementina
Ciclev10018965m.g Citrus clementina
CiPaw.09G169500 Carya illinoinensis
CiPaw.10G125900 Carya illinoinensis
CiPaw.13G127100 Carya illinoinensis
ClCG03G014400 Citrullus lanatus
ClCG10G013630 Citrullus lanatus
ClCG10G015970 Citrullus lanatus
COL.COLO4_28609 Corchorus olitorius
COL.COLO4_33078 Corchorus olitorius
Cpa.g.sc103.99 Carica papaya
Cpa.g.sc161.10 Carica papaya
Cre03.g180750 Chlamydomonas reinhardtii
CsaV3_1G041720 Cucumis sativus L.
CsaV3_3G040500 Cucumis sativus L.
CsaV3_3G040510 Cucumis sativus L.
CsaV3_3G043020 Cucumis sativus L.
CSS0008913 Camellia sinensis var. sinensis
CSS0010071 Camellia sinensis var. sinensis
CSS0011872 Camellia sinensis var. sinensis
CSS0011976 Camellia sinensis var. sinensis
CSS0029437 Camellia sinensis var. sinensis
CSS0030495 Camellia sinensis var. sinensis
CSS0032049 Camellia sinensis var. sinensis
CSS0049249 Camellia sinensis var. sinensis
DCAR_009082 Daucus carota
DCAR_012288 Daucus carota
DCAR_013479 Daucus carota
DCAR_017389 Daucus carota
DCAR_020659 Daucus carota
Dinv05570 Davidia involucrata
Dinv25110 Davidia involucrata
Dinv32132 Davidia involucrata
Dinv32840 Davidia involucrata
Duzib106G0807 Durio zibethinus
Duzib128G1095 Durio zibethinus
Duzib168G1907 Durio zibethinus
Duzib177G0929 Durio zibethinus
ECA233G0889 Erigeron canadensis
ECA238G3480 Erigeron canadensis
EL10Ac5g11755 Beta vulgaris
EL10Ac7g16244 Beta vulgaris
Eucgr.A02126 Eucalyptus grandis
Eucgr.H04350 Eucalyptus grandis
Eucgr.J00612 Eucalyptus grandis
Eucgr.J00613 Eucalyptus grandis
Eucgr.K01508 Eucalyptus grandis
Eucgr.K01511 Eucalyptus grandis
Eucgr.K01513 Eucalyptus grandis
Eucgr.K01515 Eucalyptus grandis
Eucgr.K01516 Eucalyptus grandis
Eucgr.K01517 Eucalyptus grandis
Eucgr.L01249 Eucalyptus grandis
Eucgr.L01250 Eucalyptus grandis
Eucgr.L01251 Eucalyptus grandis
Eucgr.L02116 Eucalyptus grandis
Eucgr.L02470 Eucalyptus grandis
Eucgr.L02766 Eucalyptus grandis
FAN19G0302 Fragaria x ananassa
FAN23G0729 Fragaria x ananassa
FAN26G1043 Fragaria x ananassa
FAN28G2245 Fragaria x ananassa
FvH4_1g28390 Fragaria vesca
FvH4_2g41260 Fragaria vesca
FvH4_3g27060 Fragaria vesca
Glyma.05G090100 Glycine max
Glyma.13G028400 Glycine max
Glyma.16G038300 Glycine max
Glyma.17G184900 Glycine max
Glyma.17G188100 Glycine max
Glyma.19G114500 Glycine max
Glyma.20G055900 Glycine max
Gohir.A07G114900 Gossypium hirsutum
Gohir.A08G219500 Gossypium hirsutum
Gohir.A11G231900 Gossypium hirsutum
Gohir.A11G300000 Gossypium hirsutum
Gohir.A13G097500 Gossypium hirsutum
Gohir.A13G164600 Gossypium hirsutum
Gohir.D07G119200 Gossypium hirsutum
Gohir.D08G236300 Gossypium hirsutum
Gohir.D11G243100 Gossypium hirsutum
Gohir.D11G314900 Gossypium hirsutum
Gohir.D13G102200 Gossypium hirsutum
Gohir.D13G167400 Gossypium hirsutum
Gorai.001G128200 Gossypium raimondii
Gorai.004G251500 Gossypium raimondii
Gorai.007G257500 Gossypium raimondii
Gorai.007G346100 Gossypium raimondii
Gorai.013G114400 Gossypium raimondii
Gorai.013G195000 Gossypium raimondii
GSVIVG01014767001 Vitis vinifera
GSVIVG01026229001 Vitis vinifera
GSVIVG01029971001 Vitis vinifera
GSVIVG01037511001 Vitis vinifera
HanXRQChr02g0055641 Helianthus annuus
HanXRQChr07g0197131 Helianthus annuus
HanXRQChr10g0294261 Helianthus annuus
HanXRQChr11g0328801 Helianthus annuus
HanXRQChr13g0398861 Helianthus annuus
HanXRQChr14g0453101 Helianthus annuus
Haze_20453 Corylus avellana
Haze_23632 Corylus avellana
Hma1.2p1_0106F.1_g051080 Hydrangea macrophylla
Hma1.2p1_0218F.1_g092420 Hydrangea macrophylla
Hma1.2p1_0768F.1_g215630 Hydrangea macrophylla
HPP92_000978 Vanilla planifolia
HPP92_013950 Vanilla planifolia
Hund10769 Selenicereus undatus
Hund15059 Selenicereus undatus
Hund18821 Selenicereus undatus
Hund20973 Selenicereus undatus
Hund24266 Selenicereus undatus
Lalb_Chr02g0157281 Lupinus albus
Lalb_Chr06g0174091 Lupinus albus
Lalb_Chr14g0364641 Lupinus albus
Lalb_Chr14g0364651 Lupinus albus
Lalb_Chr20g0116101 Lupinus albus
Lalb_Chr22g0358901 Lupinus albus
Lalb_Chr24g0403121 Lupinus albus
Lj1g0005632 Lotus japonicus
Lj2A418T66 Lonicera japonica
Lj2A893T36 Lonicera japonica
Lj2g0004602 Lotus japonicus
Lj2g0005926 Lotus japonicus
Lj5g0026352 Lotus japonicus
Lj6g0019346 Lotus japonicus
Lsat_1_v5_gn_1_56140 Lactuca sativa
Lsat_1_v5_gn_2_103541 Lactuca sativa
Lsat_1_v5_gn_2_104041 Lactuca sativa
Lsat_1_v5_gn_6_32121 Lactuca sativa
Lsat_1_v5_gn_8_122621 Lactuca sativa
Lsat_1_v5_gn_9_53780 Lactuca sativa
Manes.04G040700 Manihot esculenta
Manes.08G154700 Manihot esculenta
Manes.09G138200 Manihot esculenta
Mapoly0005s0150 Marchantia polymorpha
MBI02_g41937_MAGBIO Magnolia biondii
MBI05_g17878_MAGBIO Magnolia biondii
MBI05_g39107_MAGBIO Magnolia biondii
MBI09_g28581_MAGBIO Magnolia biondii
MBI10_g16393_MAGBIO Magnolia biondii
MBI11_g36551_MAGBIO Magnolia biondii
MBI11_g45237_MAGBIO Magnolia biondii
MBI14_g07933_MAGBIO Magnolia biondii
MBI16_g06661_MAGBIO Magnolia biondii
MBI18_g17947_MAGBIO Magnolia biondii
MD11G1179000 Malus domestica
MD12G1008100 Malus domestica
MD14G1005500 Malus domestica
Medtr3g079640 Medicago truncatula
Medtr6g027920 Medicago truncatula
Medtr7g086300 Medicago truncatula
MELO3C009782.2 Cucumis melo
MELO3C015586.2 Cucumis melo
MELO3C026604.2 Cucumis melo
Migut.J00765 Erythranthe guttata
Migut.L01866 Erythranthe guttata
Migut.N02422 Erythranthe guttata
MSTRG.10427 Avicennia marina
MSTRG.19354 Avicennia marina
MSTRG.26560 Avicennia marina
MSTRG.5927 Avicennia marina
Nitab4.5_0000098g0100 Nicotiana tabacum
Nitab4.5_0000121g0040 Nicotiana tabacum
Nitab4.5_0000157g0270 Nicotiana tabacum
Nitab4.5_0000157g0380 Nicotiana tabacum
Nitab4.5_0000387g0090 Nicotiana tabacum
Nitab4.5_0000428g0190 Nicotiana tabacum
Nitab4.5_0000428g0290 Nicotiana tabacum
Nitab4.5_0000428g0320 Nicotiana tabacum
Nitab4.5_0001606g0040 Nicotiana tabacum
Nitab4.5_0001998g0100 Nicotiana tabacum
Nitab4.5_0001998g0120 Nicotiana tabacum
Nitab4.5_0002087g0040 Nicotiana tabacum
Nitab4.5_0004644g0010 Nicotiana tabacum
Nitab4.5_0007883g0020 Nicotiana tabacum
Nitab4.5_0008461g0020 Nicotiana tabacum
Nitab4.5_0009617g0020 Nicotiana tabacum
Nitab4.5_0009882g0050 Nicotiana tabacum
Nitab4.5_0010594g0010 Nicotiana tabacum
Nn2g14510 Nelumbo nucifera
Nn4g23065 Nelumbo nucifera
Nn6g32401 Nelumbo nucifera
Oeu003854.1 Olea europaea
Oeu003859.1 Olea europaea
Oeu020212.1 Olea europaea
Oeu029559.1 Olea europaea
Oeu033479.1 Olea europaea
Oeu035458.1 Olea europaea
Oeu044652.1 Olea europaea
Oeu045219.1 Olea europaea
Oeu046401.1 Olea europaea
Oeu048809.1 Olea europaea
Oeu049904.1 Olea europaea
Oeu055715.1 Olea europaea
Oeu060423.1 Olea europaea
Os12g0623900 Oryza sativa ssp. japonica
Os12g0624000 Oryza sativa ssp. japonica
Peaxi162Scf00158g00321 Petunia axillaris
Peaxi162Scf00163g00910 Petunia axillaris
Peaxi162Scf00163g01014 Petunia axillaris
Peaxi162Scf00273g01010 Petunia axillaris
Peaxi162Scf00342g00928 Petunia axillaris
Peaxi162Scf01021g00029 Petunia axillaris
Peaxi162Scf30831g00001 Petunia axillaris
PGR042G0875 Punica granatum
PGR119G0140 Punica granatum
PGR142G1370 Punica granatum
PGSC0003DMG400008708 Solanum tuberosum
PGSC0003DMG400028127 Solanum tuberosum
Phvul.001G113800 Phaseolus vulgaris
Phvul.004G051600 Phaseolus vulgaris
Phvul.005G048200 Phaseolus vulgaris
Potri.004G190900 Populus trichocarpa
Potri.009G152800 Populus trichocarpa
Potri.013G061800 Populus trichocarpa
Potri.019G038268 Populus trichocarpa
Pp3c18_21210 Physcomitrium patens
Pp3c21_3730 Physcomitrium patens
Pp3c26_7220 Physcomitrium patens
Pp3c3_29280 Physcomitrium patens
Pp3c3_34930 Physcomitrium patens
Prupe.6G151800 Prunus persica
Prupe.7G009200 Prunus persica
Psat1g090760 Pisum sativum
Psat3g086760 Pisum sativum
Psat5g113080 Pisum sativum
PSO339G1990 Papaver somniferum
PSO339G4578 Papaver somniferum
PSO384G0568 Papaver somniferum
PSO384G2215 Papaver somniferum
PSO384G2745 Papaver somniferum
PSO384G4218 Papaver somniferum
PSO478G4806 Papaver somniferum
PSO782G3251 Papaver somniferum
QL01p007238 Quercus lobata
QL01p007259 Quercus lobata
QL04p072742 Quercus lobata
QL07p017833 Quercus lobata
RcHm_v2.0_Chr3g0496511 Rosa chinensis
RcHm_v2.0_Chr5g0049641 Rosa chinensis
RcHm_v2.0_Chr7g0189221 Rosa chinensis
Rhsim03G0053000 Rhododendron simsii
Rhsim13G0199800 Rhododendron simsii
Sabra04G0127500 Salix brachista
Sabra09G0120700 Salix brachista
Sabra13G0054500 Salix brachista
Sabra19G0049200 Salix brachista
Sabra19G0049300 Salix brachista
Sabra19G0049400 Salix brachista
Sc01g0006250 Simmondsia chinensis
Sc07g0007790 Simmondsia chinensis
Sc21g0006580 Simmondsia chinensis
Sc21g0006590 Simmondsia chinensis
Sc21g0006610 Simmondsia chinensis
Sed0015849 Sechium edule
Sed0018038 Sechium edule
Sed0018685 Sechium edule
Sed0024088 Sechium edule
Sed0027690 Sechium edule
SEGI_03210 Sequoiadendron giganteum
SEGI_19366 Sequoiadendron giganteum
SEGI_27313 Sequoiadendron giganteum
SEGI_39538 Sequoiadendron giganteum
SGA_v2.0_scaffold392G50660 Striga asiatica
SGA_v2.0_scaffold41G15798 Striga asiatica
SGA_v2.0_scaffold41G15800 Striga asiatica
SMO116G0476 Selaginella moellendorffii
Solyc01g009180.4 Solanum lycopersicum
Solyc10g081510.2 Solanum lycopersicum
Sopen01g004650 Solanum pennellii
Sopen10g032020 Solanum pennellii
Sp3g02760 Schrenkiella parvula
Sp6g23540 Schrenkiella parvula
Sp6g26350 Schrenkiella parvula
TAR362G0168 Trochodendron aralioides
TAR371G0128 Trochodendron aralioides
TAR371G0149 Trochodendron aralioides
TAR375G0368 Trochodendron aralioides
TAR375G0491 Trochodendron aralioides
TAR623G0711 Trochodendron aralioides
TAR625G1458 Trochodendron aralioides
TAR627G0083 Trochodendron aralioides
TAR628G0096 Trochodendron aralioides
TAR633G1012 Trochodendron aralioides
THA.LOC104799778 Tarenaya hassleriana
THA.LOC104800239 Tarenaya hassleriana
THA.LOC104802877 Tarenaya hassleriana
THA.LOC104805775 Tarenaya hassleriana
THA.LOC104815062 Tarenaya hassleriana
THA.LOC104820786 Tarenaya hassleriana
THA.LOC104823779 Tarenaya hassleriana
THA.LOC104825282 Tarenaya hassleriana
THA.LOC104827256 Tarenaya hassleriana
Thecc.05G244700 Theobroma cacao
Thecc.09G265500 Theobroma cacao
Thhalv10012712m.g Eutrema salsugineum
Thhalv10012750m.g Eutrema salsugineum
Thhalv10020127m.g Eutrema salsugineum
TPR.G17874 Trifolium pratense
TPR.G28949 Trifolium pratense
TPR.G29878 Trifolium pratense
TPR.G37915 Trifolium pratense
TWI31G0107 Tripterygium wilfordii
TWI75G1570 Tripterygium wilfordii
TWI75G1699 Tripterygium wilfordii
TWI79G0649 Tripterygium wilfordii
TWI79G1436 Tripterygium wilfordii
unitig_899.g15195 Utricularia gibba
vmacro04064 Vaccinium macrocarpon
vmacro07557 Vaccinium macrocarpon
VMungo0464G0146 Vigna mungo
VMungo0540G0970 Vigna mungo
VMungo1383G2521 Vigna mungo
Zm00001eb032290 Zea mays
Zm00001eb052750 Zea mays
Zm00001eb218320 Zea mays

User provided reference genes

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