Gene: AT3G03780
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G03780
- Transcript Identifier AT3G03780.2
- Gene Type Coding gene
- Location Chr3 : 957602-960740 : positive
Gene Family Information
- ID HOM05D001400
- #Genes/#Species 447/95
- Phylogenetic origin
- ID ORTHO05D001795
- #Genes/#Species 354/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G03780.2
- symbol MS2
- Alias ATMS2,methionine synthase 2
- uniprot Q9SRV5
Descriptions
- Description methionine synthase 2
- Computational description methionine synthase 2 (MS2); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to cadmium ion, response to salt stress, methionine biosynthetic process; LOCATED IN: cytosol, apoplast, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: Cobalamin-independent synthase family protein (TAIR:AT5G17920.2); Has 4502 Blast hits to 4490 proteins in 1700 species: Archae - 186; Bacteria - 3282; Metazoa - 14; Fungi - 208; Plants - 251; Viruses - 2; Other Eukaryotes - 559 (source: NCBI BLink).
- Computational description methionine synthase 2 (MS2); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to cadmium ion, response to salt stress, methionine biosynthetic process; LOCATED IN: cytosol, apoplast, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: Cobalamin-independent synthase family protein (TAIR:AT5G17920.2); Has 4511 Blast hits to 4499 proteins in 1700 species: Archae - 186; Bacteria - 3291; Metazoa - 14; Fungi - 208; Plants - 251; Viruses - 2; Other Eukaryotes - 559 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008652 | IEA | GOA Database | cellular amino acid biosynthetic process | |
| GO:0008652 | IEA | InterPro | cellular amino acid biosynthetic process | |
| GO:0009086 | IBA IEA | GOA Database | methionine biosynthetic process | |
| GO:0009086 | IMP | Gene Ontology | methionine biosynthetic process | 1 |
| GO:0009086 | IEA | InterPro | methionine biosynthetic process | |
| GO:0032259 | IEA | GOA Database | methylation | |
| GO:0046686 | IEP | GOA Database | response to cadmium ion |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0008270 | IEA | Gene Ontology | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003871 | IEA | Gene Ontology | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | |
| GO:0003871 | IEA | InterPro | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | |
| GO:0008705 | IBA | GOA Database | methionine synthase activity | |
| GO:0008705 | IDA | Gene Ontology | methionine synthase activity | 2 |
| GO:0008168 | IEA | GOA Database | methyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0003729 | IDA | Gene Ontology | mRNA binding | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IBA IEA | GOA Database | cytosol | |
| GO:0005829 | IDA, HDA | Gene Ontology | cytosol | 2 4 |
| GO:0005576 | IBA | GOA Database | extracellular region | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0048046 | IDA | GOA Database | apoplast | |
| GO:0009507 | IDA | GOA Database | chloroplast | |
| GO:0009941 | IDA | GOA Database | chloroplast envelope | |
| GO:0005886 | IDA | GOA Database | plasma membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 4.1.2.2.6.2.1 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.L-homocysteine S-methyltransferase activities.methyl-tetrahydrofolate-dependent methionine synthase |