Gene: ATR0697G025

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0697G025
  • Transcript Identifier ATR0697G025.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00004 : 1522230-1528126 : positive

Gene Family Information

  • ID HOM05D001400
  • #Genes/#Species 447/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00004.99.v1.0
  • pacid 31550296

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006346
ISO
PLAZA Integrative OrthologyDNA methylation-dependent heterochromatin assembly AT5G17920
GO:0051574
ISO
PLAZA Integrative Orthologypositive regulation of histone H3-K9 methylation AT5G17920
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G17920
GO:0010043
ISO
PLAZA Integrative Orthologyresponse to zinc ion AT5G17920
GO:0008652
IEA
InterProcellular amino acid biosynthetic process
GO:0009086
IEA
InterPromethionine biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G17920
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G17920
GO:0008705
ISO
PLAZA Integrative Orthologymethionine synthase activity AT5G20980
GO:0003871
IEA
InterPro5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G20980
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G17920
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G17920
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G20980
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT5G17920
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G17920
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G17920
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G03780
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G17920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038071 UROD/MetE-like superfamily
IPR006276 Cobalamin-independent methionine synthase
IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal
IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal
Mapman id Description
4.1.2.2.6.2.1 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.L-homocysteine S-methyltransferase activities.methyl-tetrahydrofolate-dependent methionine synthase