Gene: Ah.12g059780
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.12g059780
- Transcript Identifier Ah.12g059780-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_12 : 11406810-11424764 : negative
Gene Family Information
- ID HOM05D001400
- #Genes/#Species 447/95
- Phylogenetic origin
- ID ORTHO05D001795
- #Genes/#Species 354/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Ah.12g059780-v1.1.a1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051574 | ISO | PLAZA Integrative Orthology | positive regulation of histone H3-K9 methylation | AT5G17920 |
| GO:0006346 | ISO | PLAZA Integrative Orthology | DNA methylation-dependent heterochromatin assembly | AT5G17920 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT5G17920 |
| GO:0010043 | ISO | PLAZA Integrative Orthology | response to zinc ion | AT5G17920 |
| GO:0008652 | IEA | InterPro | cellular amino acid biosynthetic process | |
| GO:0009086 | IEA | InterPro | methionine biosynthetic process | |
| GO:0006468 | IEA | InterPro | protein phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G17920 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G17920 |
| GO:0008705 | ISO | PLAZA Integrative Orthology | methionine synthase activity | AT5G17920 |
| GO:0004672 | IEA | InterPro | protein kinase activity | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003871 | IEA | InterPro | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G17920 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G17920 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT5G17920 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G17920 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G17920 |
| GO:0005777 | ISO | PLAZA Integrative Orthology | peroxisome | AT5G17920 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT5G17920 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT3G03780 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G17920 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032675 | Leucine-rich repeat domain superfamily |
| IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain |
| IPR038071 | UROD/MetE-like superfamily |
| IPR002629 | Cobalamin-independent methionine synthase MetE, C-terminal/archaeal |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR013215 | Cobalamin-independent methionine synthase MetE, N-terminal |
| Mapman id | Description |
|---|---|
| 18.4.1.6.1 | Protein modification.phosphorylation.TKL protein kinase superfamily.LRR-VI protein kinase families.protein kinase (LRR-VI-1) |
| 4.1.2.2.6.2.1 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.L-homocysteine S-methyltransferase activities.methyl-tetrahydrofolate-dependent methionine synthase |