Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p10670 Brassica napus
A07p13380 Brassica napus
A07p13390 Brassica napus
A08p27330 Brassica napus
A08p31910 Brassica napus
A09p61990 Brassica napus
A10p22510 Brassica napus
Aa31LG11G12960 Aethionema arabicum
Aa31LG1G460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3855 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3856 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3857 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2529 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4580 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3387 Anthoceros agrestis
Actinidia23793 Actinidia chinensis
Actinidia25176 Actinidia chinensis
Actinidia28813 Actinidia chinensis
Actinidia28814 Actinidia chinensis
Actinidia28815 Actinidia chinensis
Actinidia32900 Actinidia chinensis
Actinidia32901 Actinidia chinensis
Actinidia32902 Actinidia chinensis
Actinidia34075 Actinidia chinensis
Actinidia34544 Actinidia chinensis
Actinidia35731 Actinidia chinensis
Ah.03g134560 Amaranthus hybridus
Ah.12g060150 Amaranthus hybridus
AL1G26580 Arabidopsis lyrata
AL1G38320 Arabidopsis lyrata
AL3G41580 Arabidopsis lyrata
AL6G27720 Arabidopsis lyrata
Aqoxy2G00612 Aquilegia oxysepala
Aqoxy2G00887 Aquilegia oxysepala
Aqoxy2G00888 Aquilegia oxysepala
Aqoxy2G00889 Aquilegia oxysepala
Aqoxy2G00890 Aquilegia oxysepala
Aqoxy2G03097 Aquilegia oxysepala
Aqoxy7G00465 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0T11RW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K04UQ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R98RGQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XLS2Y4 Arachis hypogaea
AT1G14610 Arabidopsis thaliana
AT1G27160 Arabidopsis thaliana
AT5G16715 Arabidopsis thaliana
ATR0697G119 Amborella trichopoda
ATR0782G056 Amborella trichopoda
Atru.chr1.1875 Acer truncatum
AUR62002803 Chenopodium quinoa
AUR62014110 Chenopodium quinoa
AUR62014114 Chenopodium quinoa
AUR62018211 Chenopodium quinoa
AUR62038698 Chenopodium quinoa
AUR62038699 Chenopodium quinoa
BcaB02g06531 Brassica carinata
BcaB03g13091 Brassica carinata
BcaB03g14115 Brassica carinata
BcaB03g14116 Brassica carinata
BcaC04g18858 Brassica carinata
BcaC04g18859 Brassica carinata
BcaC05g25377 Brassica carinata
BcaC06g34238 Brassica carinata
BcaC06g35085 Brassica carinata
BcaC06g35086 Brassica carinata
BcaC07g38749 Brassica carinata
BcaC07g41556 Brassica carinata
BcaNung05660 Brassica carinata
BolC3t19544H Brassica oleracea
BolC5t30002H Brassica oleracea
BolC7t42520H Brassica oleracea
BolC8t49300H Brassica oleracea
BolC8t52110H Brassica oleracea
BolC9t58869H Brassica oleracea
BraA06t24247Z Brassica rapa
BraA07t29110Z Brassica rapa
BraA07t29111Z Brassica rapa
BraA08t34676Z Brassica rapa
BraA08t35113Z Brassica rapa
BraA09t41562Z Brassica rapa
BraA10t44310Z Brassica rapa
C05p12580 Brassica napus
C07p20010 Brassica napus
C08p16790 Brassica napus
C08p45570 Brassica napus
C09p60360 Brassica napus
CAN.G1091.5 Capsicum annuum
CAN.G207.6 Capsicum annuum
CAN.G703.8 Capsicum annuum
CANSAT56G1922 Cannabis sativa
CANSAT56G2795 Cannabis sativa
CANSAT71G0007 Cannabis sativa
CARHR015110 Cardamine hirsuta
CARHR024700 Cardamine hirsuta
CARHR024710 Cardamine hirsuta
CARHR144600 Cardamine hirsuta
CARHR196470 Cardamine hirsuta
CARHR260940 Cardamine hirsuta
Carub.0001s1437 Capsella rubella
Carub.0001s3391 Capsella rubella
Carub.0005s0101 Capsella rubella
Carub.0006s1493 Capsella rubella
Ca_10801_v3 Cicer arietinum L.
Ca_25679_v3 Cicer arietinum L.
CBR_g31285 Chara braunii
CBR_g4483 Chara braunii
CBR_g88870 Chara braunii
Cc06_g03770 Coffea canephora
CDE08G1587 Ceratophyllum demersum
CDE10G1341 Ceratophyllum demersum
Cfa008272 Carpinus fangiana
Cfa017719 Carpinus fangiana
Cfa021716 Carpinus fangiana
Ciclev10004208m.g Citrus clementina
Ciclev10010998m.g Citrus clementina
CiPaw.04G068200 Carya illinoinensis
CiPaw.09G167000 Carya illinoinensis
CiPaw.09G167100 Carya illinoinensis
ClCG01G005670 Citrullus lanatus
ClCG01G005680 Citrullus lanatus
ClCG05G011510 Citrullus lanatus
COL.COLO4_04102 Corchorus olitorius
COL.COLO4_09038 Corchorus olitorius
COL.COLO4_09039 Corchorus olitorius
COL.COLO4_25471 Corchorus olitorius
COL.COLO4_31125 Corchorus olitorius
Cpa.g.sc116.46 Carica papaya
Cpa.g.sc2.74 Carica papaya
Cre07.g350500 Chlamydomonas reinhardtii
Cre12.g537100 Chlamydomonas reinhardtii
CsaV3_3G020830 Cucumis sativus L.
CsaV3_5G005900 Cucumis sativus L.
CSS0004873 Camellia sinensis var. sinensis
CSS0005968 Camellia sinensis var. sinensis
CSS0006913 Camellia sinensis var. sinensis
CSS0026523 Camellia sinensis var. sinensis
CSS0030571 Camellia sinensis var. sinensis
DCAR_003434 Daucus carota
DCAR_020225 Daucus carota
Dinv19030 Davidia involucrata
Dinv31233 Davidia involucrata
Dinv36391 Davidia involucrata
Duzib133G1570 Durio zibethinus
Duzib170G0790 Durio zibethinus
ECA240G1446 Erigeron canadensis
ECA240G2105 Erigeron canadensis
ECA246G3910 Erigeron canadensis
EL10Ac2g03165 Beta vulgaris
EL10Ac5g11700 Beta vulgaris
EL10Ac8g19565 Beta vulgaris
Eucgr.E01106 Eucalyptus grandis
Eucgr.F02848 Eucalyptus grandis
Eucgr.F04425 Eucalyptus grandis
FAN01G1271 Fragaria x ananassa
FAN01G1312 Fragaria x ananassa
FAN03G0802 Fragaria x ananassa
FAN03G1076 Fragaria x ananassa
FAN03G1326 Fragaria x ananassa
FAN03G1857 Fragaria x ananassa
FAN06G0336 Fragaria x ananassa
FAN06G0463 Fragaria x ananassa
FAN06G1244 Fragaria x ananassa
FAN06G3412 Fragaria x ananassa
FAN06G3456 Fragaria x ananassa
FAN10G1869 Fragaria x ananassa
FAN10G3015 Fragaria x ananassa
FAN13G1017 Fragaria x ananassa
FAN18G4114 Fragaria x ananassa
FAN23G3091 Fragaria x ananassa
FvH4_5g33250 Fragaria vesca
FvH4_7g01700 Fragaria vesca
FvH4_7g04130 Fragaria vesca
FvH4_7g28901 Fragaria vesca
FvH4_7g28940 Fragaria vesca
Glyma.05G089050 Glycine max
Glyma.10G239500 Glycine max
Glyma.17G186800 Glycine max
Glyma.17G186900 Glycine max
Glyma.17G187000 Glycine max
Glyma.18G051300 Glycine max
Glyma.20G155000 Glycine max
Gohir.A01G231880 Gossypium hirsutum
Gohir.A08G018000 Gossypium hirsutum
Gohir.A08G253800 Gossypium hirsutum
Gohir.A10G243050 Gossypium hirsutum
Gohir.A12G276975 Gossypium hirsutum
Gohir.A12G277201 Gossypium hirsutum
Gohir.D01G140701 Gossypium hirsutum
Gohir.D01G222000 Gossypium hirsutum
Gohir.D03G178350 Gossypium hirsutum
Gohir.D07G000261 Gossypium hirsutum
Gohir.D07G000800 Gossypium hirsutum
Gohir.D08G028600 Gossypium hirsutum
Gohir.D08G275314 Gossypium hirsutum
Gohir.D09G073701 Gossypium hirsutum
Gohir.D10G255000 Gossypium hirsutum
Gohir.D11G349100 Gossypium hirsutum
Gohir.D11G349400 Gossypium hirsutum
Gohir.D12G131400 Gossypium hirsutum
Gohir.D12G141700 Gossypium hirsutum
Gorai.002G000100 Gossypium raimondii
Gorai.002G172800 Gossypium raimondii
Gorai.002G268700 Gossypium raimondii
Gorai.004G025700 Gossypium raimondii
Gorai.005G269400 Gossypium raimondii
Gorai.005G269600 Gossypium raimondii
Gorai.005G269800 Gossypium raimondii
Gorai.006G101900 Gossypium raimondii
Gorai.006G274700 Gossypium raimondii
Gorai.007G000600 Gossypium raimondii
Gorai.007G379600 Gossypium raimondii
Gorai.008G142700 Gossypium raimondii
Gorai.008G153100 Gossypium raimondii
Gorai.008G298700 Gossypium raimondii
Gorai.008G298900 Gossypium raimondii
Gorai.011G000300 Gossypium raimondii
Gorai.011G296000 Gossypium raimondii
Gorai.N015700 Gossypium raimondii
GSVIVG01010632001 Vitis vinifera
GSVIVG01010703001 Vitis vinifera
GSVIVG01027222001 Vitis vinifera
GSVIVG01030775001 Vitis vinifera
GSVIVG01030776001 Vitis vinifera
HanXRQChr03g0071441 Helianthus annuus
HanXRQChr07g0197731 Helianthus annuus
HanXRQChr10g0283681 Helianthus annuus
HanXRQChr14g0461381 Helianthus annuus
Haze_10572 Corylus avellana
Haze_13765 Corylus avellana
Haze_13766 Corylus avellana
Haze_13767 Corylus avellana
Haze_20419 Corylus avellana
Haze_26620 Corylus avellana
Hma1.2p1_0524F.1_g172340 Hydrangea macrophylla
Hma1.2p1_0524F.1_g172350 Hydrangea macrophylla
Hma1.2p1_0524F.1_g172360 Hydrangea macrophylla
Hma1.2p1_0524F.1_g172370 Hydrangea macrophylla
Hma1.2p1_1840F.1_g304930 Hydrangea macrophylla
Hma1.2p1_1840F.1_g304940 Hydrangea macrophylla
HPP92_000859 Vanilla planifolia
HPP92_000860 Vanilla planifolia
HPP92_000864 Vanilla planifolia
HPP92_001073 Vanilla planifolia
HPP92_001074 Vanilla planifolia
Hund13115 Selenicereus undatus
Hund20713 Selenicereus undatus
Hund20715 Selenicereus undatus
Lalb_Chr12g0210011 Lupinus albus
Lalb_Chr14g0364821 Lupinus albus
Lj2g0008629 Lotus japonicus
Lj4A264G50 Lonicera japonica
Lj9C302G3 Lonicera japonica
LjContig00238g0000416 Lotus japonicus
Lsat_1_v5_gn_0_3280 Lactuca sativa
Lsat_1_v5_gn_1_100720 Lactuca sativa
Lsat_1_v5_gn_1_100761 Lactuca sativa
Lsat_1_v5_gn_3_65141 Lactuca sativa
Lsat_1_v5_gn_4_121141 Lactuca sativa
Lsat_1_v5_gn_4_173780 Lactuca sativa
Lsat_1_v5_gn_5_24801 Lactuca sativa
Lsat_1_v5_gn_5_61861 Lactuca sativa
Lsat_1_v5_gn_7_60700 Lactuca sativa
Lsat_1_v5_gn_7_60720 Lactuca sativa
Lsat_1_v5_gn_7_60741 Lactuca sativa
Manes.02G076200 Manihot esculenta
Manes.09G005800 Manihot esculenta
Mapoly0040s0139 Marchantia polymorpha
Mapoly0132s0012 Marchantia polymorpha
MBI11_g24566_MAGBIO Magnolia biondii
MBI18_g01867_MAGBIO Magnolia biondii
MBI18_g21798_MAGBIO Magnolia biondii
MBI18_g21799_MAGBIO Magnolia biondii
MBI18_g21800_MAGBIO Magnolia biondii
MCO07G752 Micromonas commoda
MCO14G022 Micromonas commoda
MD01G1196000 Malus domestica
MD03G1000400 Malus domestica
MD05G1034800 Malus domestica
MD06G1107900 Malus domestica
MD07G1262800 Malus domestica
MD09G1264300 Malus domestica
MD09G1264400 Malus domestica
MD15G1255900 Malus domestica
MD15G1433500 Malus domestica
MD17G1256800 Malus domestica
MD17G1258800 Malus domestica
MD17G1259600 Malus domestica
MD17G1259800 Malus domestica
MD17G1260100 Malus domestica
Medtr1g101620 Medicago truncatula
Medtr6g027620 Medicago truncatula
MELO3C005366.2 Cucumis melo
MELO3C020199.2 Cucumis melo
Migut.D01299 Erythranthe guttata
Migut.J00558 Erythranthe guttata
Migut.J00692 Erythranthe guttata
Migut.L01675 Erythranthe guttata
MSTRG.26714 Avicennia marina
MSTRG.4620 Avicennia marina
Nitab4.5_0000203g0010 Nicotiana tabacum
Nitab4.5_0000669g0060 Nicotiana tabacum
Nitab4.5_0001206g0010 Nicotiana tabacum
Nitab4.5_0001206g0020 Nicotiana tabacum
Nitab4.5_0003197g0040 Nicotiana tabacum
Nitab4.5_0004484g0010 Nicotiana tabacum
Nitab4.5_0004729g0010 Nicotiana tabacum
Nitab4.5_0004729g0020 Nicotiana tabacum
Nitab4.5_0008025g0020 Nicotiana tabacum
Nn7g38289 Nelumbo nucifera
Nn8g40729 Nelumbo nucifera
Oeu001345.1 Olea europaea
Oeu006731.1 Olea europaea
Oeu006734.3 Olea europaea
Oeu022370.1 Olea europaea
Oeu023509.1 Olea europaea
Os03g0111700 Oryza sativa ssp. japonica
Os03g0335600 Oryza sativa ssp. japonica
Os03g0694900 Oryza sativa ssp. japonica
Os07g0163500 Oryza sativa ssp. japonica
Os10g0506200 Oryza sativa ssp. japonica
Peaxi162Scf00057g02721 Petunia axillaris
Peaxi162Scf00057g02722 Petunia axillaris
Peaxi162Scf00057g02723 Petunia axillaris
Peaxi162Scf00079g00089 Petunia axillaris
Peaxi162Scf00169g00036 Petunia axillaris
Peaxi162Scf00182g00085 Petunia axillaris
Peaxi162Scf00182g00086 Petunia axillaris
Peaxi162Scf00254g00012 Petunia axillaris
Peaxi162Scf00597g00719 Petunia axillaris
PGR004G0453 Punica granatum
PGR031G0644 Punica granatum
PGR031G2005 Punica granatum
PGR031G3093 Punica granatum
PGR031G3244 Punica granatum
PGR031G3606 Punica granatum
Phvul.004G073700 Phaseolus vulgaris
Phvul.007G066400 Phaseolus vulgaris
Potri.004G090666 Populus trichocarpa
Potri.004G090732 Populus trichocarpa
Potri.005G087850 Populus trichocarpa
Potri.007G004100 Populus trichocarpa
Potri.017G124500 Populus trichocarpa
Pp3c12_13790 Physcomitrium patens
Pp3c1_36010 Physcomitrium patens
Pp3c2_9830 Physcomitrium patens
PRCOL_00006335 Prasinoderma coloniale
PRCOL_00006948 Prasinoderma coloniale
Prupe.1G576900 Prunus persica
Prupe.2G289400 Prunus persica
Prupe.3G161900 Prunus persica
Prupe.3G162000 Prunus persica
Psat1g089800 Pisum sativum
Psat6g201440 Pisum sativum
PSO339G4038 Papaver somniferum
PSO384G0294 Papaver somniferum
PSO478G1977 Papaver somniferum
PSO782G2668 Papaver somniferum
PSO832G0335 Papaver somniferum
PSO832G4571 Papaver somniferum
QL06p044842 Quercus lobata
QL07p019084 Quercus lobata
QL09p015520 Quercus lobata
QL09p048218 Quercus lobata
QL11p048138 Quercus lobata
QL11p048141 Quercus lobata
QL11p048148 Quercus lobata
RcHm_v2.0_Chr1g0328051 Rosa chinensis
RcHm_v2.0_Chr1g0376611 Rosa chinensis
RcHm_v2.0_Chr2g0151751 Rosa chinensis
RcHm_v2.0_Chr2g0151761 Rosa chinensis
RcHm_v2.0_Chr5g0049821 Rosa chinensis
RcHm_v2.0_Chr5g0066661 Rosa chinensis
RcHm_v2.0_Chr7g0182401 Rosa chinensis
RcHm_v2.0_Chr7g0218391 Rosa chinensis
RcHm_v2.0_Chr7g0218401 Rosa chinensis
RcHm_v2.0_Chr7g0218411 Rosa chinensis
RcHm_v2.0_Chr7g0232241 Rosa chinensis
RcHm_v2.0_Chr7g0232251 Rosa chinensis
RcHm_v2.0_Chr7g0232281 Rosa chinensis
RcHm_v2.0_Chr7g0232291 Rosa chinensis
RcHm_v2.0_Chr7g0232301 Rosa chinensis
Rhsim08G0018500 Rhododendron simsii
Sabra07G0003000 Salix brachista
Sabra17G0105100 Salix brachista
SalBow5G1075 Salvia bowleyana
Sc07g0001630 Simmondsia chinensis
Sc14g0006490 Simmondsia chinensis
Sed0004659 Sechium edule
Sed0009589 Sechium edule
Sed0018333 Sechium edule
SEGI_00245 Sequoiadendron giganteum
SEGI_04262 Sequoiadendron giganteum
SEGI_06790 Sequoiadendron giganteum
SEGI_08428 Sequoiadendron giganteum
SEGI_11941 Sequoiadendron giganteum
SEGI_13833 Sequoiadendron giganteum
SEGI_14901 Sequoiadendron giganteum
SEGI_20814 Sequoiadendron giganteum
SEGI_24849 Sequoiadendron giganteum
SEGI_27948 Sequoiadendron giganteum
SEGI_33021 Sequoiadendron giganteum
SGA_v2.0_scaffold35G14149 Striga asiatica
SGA_v2.0_scaffold40G15632 Striga asiatica
SGA_v2.0_scaffold452G51847 Striga asiatica
SHI25544 Sapria himalayana
SHI25545 Sapria himalayana
SHI25546 Sapria himalayana
SHI25547 Sapria himalayana
SHI28861 Sapria himalayana
SMO165G0098 Selaginella moellendorffii
SMO358G0706 Selaginella moellendorffii
Solyc09g007540.3 Solanum lycopersicum
Solyc12g019100.2 Solanum lycopersicum
Solyc12g019110.3 Solanum lycopersicum
Sopen09g002410 Solanum pennellii
Sopen12g009300 Solanum pennellii
Sp1g12970 Schrenkiella parvula
Sp6g27440 Schrenkiella parvula
TAR375G1057 Trochodendron aralioides
TAR375G1109 Trochodendron aralioides
TAR375G1141 Trochodendron aralioides
TAR623G1183 Trochodendron aralioides
TAR629G1395 Trochodendron aralioides
THA.LOC104805109 Tarenaya hassleriana
THA.LOC104808369 Tarenaya hassleriana
THA.LOC104824111 Tarenaya hassleriana
THA.LOC104827192 Tarenaya hassleriana
Thecc.04G116700 Theobroma cacao
Thecc.07G159900 Theobroma cacao
Thecc.09G180600 Theobroma cacao
Thhalv10006628m.g Eutrema salsugineum
Thhalv10006653m.g Eutrema salsugineum
Thhalv10012577m.g Eutrema salsugineum
TPR.G17429 Trifolium pratense
TPR.G34728 Trifolium pratense
TPR.G35631 Trifolium pratense
TWI15G0272 Tripterygium wilfordii
TWI74G1301 Tripterygium wilfordii
TWI81G0741 Tripterygium wilfordii
unitig_744.g24676 Utricularia gibba
unitig_749.g13792 Utricularia gibba
vmacro06728 Vaccinium macrocarpon
vmacro06729 Vaccinium macrocarpon
vmacro18535 Vaccinium macrocarpon
VMungo0464G0907 Vigna mungo
VMungo0464G1730 Vigna mungo
VMungo0720G1540 Vigna mungo
Zm00001eb104290 Zea mays
Zm00001eb117220 Zea mays
Zm00001eb415210 Zea mays
Zm00001eb415220 Zea mays

User provided reference genes

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