Gene: Os07g0163500
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os07g0163500
- Transcript Identifier Os07t0163500-01
- Gene Type Coding gene
- Location chr07 : 3388224-3399876 : positive
Gene Family Information
- ID HOM05D001392
- #Genes/#Species 451/99
- Phylogenetic origin
- ID ORTHO05D006407
- #Genes/#Species 143/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os07t0163500-01
- MSU-ID LOC_Os07g06940.1
- symbol OsValRS2
- symbol WP1
- symbol ValRS2
- name Val-tRNA Synthetase 2
- name white panicle 1
- name WHITE PANICLE1
- uniprot Q0D8F6
Descriptions
- Description Val-tRNA synthetase, Regulation of chloroplast ribosome biogenesis, Early chloroplast development
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G16715 |
| GO:0006418 | IEA | GOA Database | tRNA aminoacylation for protein translation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0006438 | IBA IEA | GOA Database | valyl-tRNA aminoacylation | |
| GO:0006438 | IEA | InterPro | valyl-tRNA aminoacylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0002161 | IEA | InterPro | aminoacyl-tRNA editing activity | |
| GO:0004812 | IEA | GOA Database | aminoacyl-tRNA ligase activity | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004832 | IBA IEA | GOA Database | valine-tRNA ligase activity | |
| GO:0004832 | IEA | InterPro | valine-tRNA ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G16715 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G16715 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0005829 | IBA | GOA Database | cytosol |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002303 | Valine-tRNA ligase |
| IPR009080 | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR033705 | Valyl tRNA synthetase, anticodon-binding domain |
| IPR009008 | Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain |
| IPR019499 | Valyl-tRNA synthetase, tRNA-binding arm |
| IPR002300 | Aminoacyl-tRNA synthetase, class Ia |
| IPR013155 | Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding |
| IPR010978 | Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm |
| IPR037118 | Valyl-tRNA synthetase, tRNA-binding arm superfamily |
| Mapman id | Description |
|---|---|
| 17.2.22 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase |