Gene: Solyc09g007540.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g007540.3
  • Transcript Identifier Solyc09g007540.3.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 1146558-1159333 : positive

Gene Family Information

  • ID HOM05D001392
  • #Genes/#Species 451/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g007540.3.1
  • uniprot A0A3Q7HVX8
  • gene_id Solyc09g007540

Descriptions

  • Description Valine--tRNA ligase (AHRD V3.3 *** A0A2G2XZM1_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G14610
GO:0006438
IBA
IEA
GOA Databasevalyl-tRNA aminoacylation
GO:0006438
IEA
InterProvalyl-tRNA aminoacylation
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006412
IEA
GOA Databasetranslation
GO:0106074
IEA
GOA Databaseaminoacyl-tRNA metabolism involved in translational fidelity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0004832
IBA
IEA
GOA Databasevaline-tRNA ligase activity
GO:0004832
IEA
InterProvaline-tRNA ligase activity
GO:0002161
IEA
GOA Databaseaminoacyl-tRNA editing activity
GO:0002161
IEA
InterProaminoacyl-tRNA editing activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G14610
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G14610
GO:0005829
IBA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR002300 Aminoacyl-tRNA synthetase, class Ia
IPR002303 Valine-tRNA ligase
IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily
IPR033705 Valyl tRNA synthetase, anticodon-binding domain
Mapman id Description
17.2.22 Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase