Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16750 Brassica napus
A03p15940 Brassica napus
A04p13280 Brassica napus
A04p13290 Brassica napus
A07p04880 Brassica napus
A10p09770 Brassica napus
Aa31LG1G27180 Aethionema arabicum
Aa31LG3G8400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3238 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3245 Anthoceros agrestis
Actinidia19308 Actinidia chinensis
Actinidia19309 Actinidia chinensis
Actinidia22699 Actinidia chinensis
Actinidia31459 Actinidia chinensis
Ah.05g173660 Amaranthus hybridus
Ah.05g175900 Amaranthus hybridus
Ah.05g175920 Amaranthus hybridus
Ah.13g067890 Amaranthus hybridus
AL3G46230 Arabidopsis lyrata
AL4G44900 Arabidopsis lyrata
AL7G27650 Arabidopsis lyrata
AL7G48690 Arabidopsis lyrata
AL8G26310 Arabidopsis lyrata
Aqoxy5G03988 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2K10XJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3ZLA4U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4QP1TN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.85MML8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8K9LCJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A57DXV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BQE19I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C4VQXX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CBSK0B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DAPK4A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DD99A7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E8Y2WS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G0UD5H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G4JC50 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GHR1LT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GQT8P7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HBJB6N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HWX0BC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ITY2T4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LEPX0K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MCR2FH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q95WBF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RH3JZT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S9B0CK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UFST2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UI9RNN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VIJ8E1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4V2BL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WU4XQ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z9IP40 Arachis hypogaea
AT4G25440 Arabidopsis thaliana
AT5G40880 Arabidopsis thaliana
AT5G49200 Arabidopsis thaliana
AT5G51980 Arabidopsis thaliana
ATR0757G222 Amborella trichopoda
Atru.chr1.1506 Acer truncatum
Atru.chr1.1507 Acer truncatum
Atru.chr1.542 Acer truncatum
Atru.chr10.1113 Acer truncatum
Atru.chr5.387 Acer truncatum
AUR62006293 Chenopodium quinoa
AUR62016044 Chenopodium quinoa
AUR62021250 Chenopodium quinoa
AUR62026342 Chenopodium quinoa
BcaB01g04175 Brassica carinata
BcaB06g27479 Brassica carinata
BcaB06g27483 Brassica carinata
BcaB08g35460 Brassica carinata
BcaB08g35553 Brassica carinata
BcaC01g06150 Brassica carinata
BcaC04g20614 Brassica carinata
BcaC08g43962 Brassica carinata
BcaC09g50768 Brassica carinata
BcaNung03696 Brassica carinata
BolC1t02029H Brassica oleracea
BolC3t14265H Brassica oleracea
BolC4t26299H Brassica oleracea
BolC4t26301H Brassica oleracea
BolC5t30733H Brassica oleracea
BolC6t36528H Brassica oleracea
BolC9t57027H Brassica oleracea
BraA01t01628Z Brassica rapa
BraA03t10884Z Brassica rapa
BraA04t16986Z Brassica rapa
BraA04t16987Z Brassica rapa
BraA10t43059Z Brassica rapa
C01p21050 Brassica napus
C03p18740 Brassica napus
C04p47040 Brassica napus
C04p47060 Brassica napus
C05p20380 Brassica napus
C06p13630 Brassica napus
C08p20870 Brassica napus
C09p41490 Brassica napus
CAN.G428.4 Capsicum annuum
CANSAT21G2571 Cannabis sativa
CANSAT64G0204 Cannabis sativa
CANSAT64G0491 Cannabis sativa
CANSAT64G1887 Cannabis sativa
CANSAT64G2364 Cannabis sativa
CANSAT64G2527 Cannabis sativa
CANSAT64G2908 Cannabis sativa
CARHR140940 Cardamine hirsuta
CARHR213550 Cardamine hirsuta
CARHR213620 Cardamine hirsuta
CARHR213860 Cardamine hirsuta
CARHR213870 Cardamine hirsuta
CARHR232870 Cardamine hirsuta
CARHR264920 Cardamine hirsuta
CARHR288400 Cardamine hirsuta
Carub.0003s3411 Capsella rubella
Carub.0007s1554 Capsella rubella
Carub.0007s3462 Capsella rubella
Carub.0008s1207 Capsella rubella
Ca_23753_v3 Cicer arietinum L.
Ca_23759_v3 Cicer arietinum L.
Ca_23771_v3 Cicer arietinum L.
Ca_25982_v3 Cicer arietinum L.
Ca_26266_v3 Cicer arietinum L.
CBR_g39512 Chara braunii
Cc02_g03500 Coffea canephora
Cc02_g37130 Coffea canephora
Cc02_g37140 Coffea canephora
Cc04_g14830 Coffea canephora
Cc11_g03180 Coffea canephora
CDE02G0553 Ceratophyllum demersum
CDE02G4329 Ceratophyllum demersum
CDE11G0411 Ceratophyllum demersum
Cfa000707 Carpinus fangiana
Cfa002017 Carpinus fangiana
Cfa008269 Carpinus fangiana
Cfa010645 Carpinus fangiana
Ciclev10004933m.g Citrus clementina
Ciclev10005002m.g Citrus clementina
Ciclev10017981m.g Citrus clementina
Ciclev10024419m.g Citrus clementina
CiPaw.01G220300 Carya illinoinensis
CiPaw.03G101500 Carya illinoinensis
CiPaw.04G068700 Carya illinoinensis
ClCG10G013550 Citrullus lanatus
COL.COLO4_10065 Corchorus olitorius
COL.COLO4_13067 Corchorus olitorius
COL.COLO4_13070 Corchorus olitorius
COL.COLO4_14246 Corchorus olitorius
COL.COLO4_15557 Corchorus olitorius
COL.COLO4_26872 Corchorus olitorius
COL.COLO4_28005 Corchorus olitorius
COL.COLO4_28008 Corchorus olitorius
COL.COLO4_28031 Corchorus olitorius
COL.COLO4_28032 Corchorus olitorius
COL.COLO4_37656 Corchorus olitorius
COL.COLO4_38539 Corchorus olitorius
Cpa.g.c26924.2 Carica papaya
Cpa.g.c39126 Carica papaya
Cpa.g.sc4.223 Carica papaya
Cpa.g.sc519.1 Carica papaya
Cpa.g.sc90.22 Carica papaya
Cre12.g510150 Chlamydomonas reinhardtii
CsaV3_3G043090 Cucumis sativus L.
CSS0042180 Camellia sinensis var. sinensis
CSS0045148 Camellia sinensis var. sinensis
CSS0048137 Camellia sinensis var. sinensis
DCAR_009404 Daucus carota
DCAR_016000 Daucus carota
DCAR_018151 Daucus carota
Dinv02980 Davidia involucrata
Dinv28497 Davidia involucrata
Dinv32416 Davidia involucrata
Dinv35166 Davidia involucrata
Duzib068G1090 Durio zibethinus
Duzib147G1526 Durio zibethinus
Duzib205G1137 Durio zibethinus
ECA233G4894 Erigeron canadensis
EL10Ac1g00971 Beta vulgaris
EL10Ac3g05725 Beta vulgaris
EL10Ac8g18930 Beta vulgaris
EL10Ac8g18932 Beta vulgaris
EL10Ac8g18933 Beta vulgaris
EL10Ac8g18934 Beta vulgaris
EL10Ac8g18935 Beta vulgaris
Eucgr.A02838 Eucalyptus grandis
Eucgr.E01318 Eucalyptus grandis
Eucgr.E01320 Eucalyptus grandis
Eucgr.E02477 Eucalyptus grandis
Eucgr.E02478 Eucalyptus grandis
Eucgr.E02500 Eucalyptus grandis
Eucgr.E02826 Eucalyptus grandis
Eucgr.E02828 Eucalyptus grandis
Eucgr.E02830 Eucalyptus grandis
Eucgr.E02832 Eucalyptus grandis
Eucgr.E02833 Eucalyptus grandis
Eucgr.E02834 Eucalyptus grandis
Eucgr.E02835 Eucalyptus grandis
Eucgr.L02012 Eucalyptus grandis
FAN01G1359 Fragaria x ananassa
FAN02G0093 Fragaria x ananassa
FAN03G1395 Fragaria x ananassa
FAN03G1833 Fragaria x ananassa
FAN06G1785 Fragaria x ananassa
FAN06G2920 Fragaria x ananassa
FAN06G4225 Fragaria x ananassa
FAN07G0724 Fragaria x ananassa
FAN10G1082 Fragaria x ananassa
FAN12G2882 Fragaria x ananassa
FAN15G2373 Fragaria x ananassa
FAN15G2491 Fragaria x ananassa
FAN17G1830 Fragaria x ananassa
FAN20G1276 Fragaria x ananassa
FAN21G3625 Fragaria x ananassa
FAN24G1612 Fragaria x ananassa
FAN27G2370 Fragaria x ananassa
FvH4_2g11571 Fragaria vesca
FvH4_2g11580 Fragaria vesca
FvH4_3g29280 Fragaria vesca
FvH4_4g05980 Fragaria vesca
FvH4_7g28880 Fragaria vesca
Glyma.02G225400 Glycine max
Glyma.09G148000 Glycine max
Glyma.14G192200 Glycine max
Glyma.15G174300 Glycine max
Glyma.15G174400 Glycine max
Glyma.15G174500 Glycine max
Glyma.15G174600 Glycine max
Glyma.15G174650 Glycine max
Glyma.15G174700 Glycine max
Glyma.15G174800 Glycine max
Glyma.15G174833 Glycine max
Glyma.15G174866 Glycine max
Glyma.15G174899 Glycine max
Glyma.15G174900 Glycine max
Glyma.15G174932 Glycine max
Glyma.15G174965 Glycine max
Glyma.15G175000 Glycine max
Glyma.15G175100 Glycine max
Glyma.15G175300 Glycine max
Glyma.15G175400 Glycine max
Glyma.15G175500 Glycine max
Glyma.16G199300 Glycine max
Glyma.U005100 Glycine max
Gohir.A09G039200 Gossypium hirsutum
Gohir.A10G150700 Gossypium hirsutum
Gohir.A12G261400 Gossypium hirsutum
Gohir.D09G040300 Gossypium hirsutum
Gohir.D10G114650 Gossypium hirsutum
Gohir.D10G115600 Gossypium hirsutum
Gohir.D12G262300 Gossypium hirsutum
Gorai.006G046100 Gossypium raimondii
Gorai.008G281100 Gossypium raimondii
Gorai.011G126400 Gossypium raimondii
Gorai.011G127400 Gossypium raimondii
GSVIVG01010638001 Vitis vinifera
GSVIVG01010659001 Vitis vinifera
GSVIVG01018431001 Vitis vinifera
GSVIVG01019135001 Vitis vinifera
GSVIVG01027214001 Vitis vinifera
GSVIVG01034388001 Vitis vinifera
GSVIVG01034389001 Vitis vinifera
GSVIVG01034390001 Vitis vinifera
GSVIVG01034394001 Vitis vinifera
GSVIVG01034397001 Vitis vinifera
GSVIVG01034402001 Vitis vinifera
GSVIVG01034409001 Vitis vinifera
GSVIVG01037826001 Vitis vinifera
GSVIVG01037831001 Vitis vinifera
HanXRQChr01g0003351 Helianthus annuus
HanXRQChr05g0141361 Helianthus annuus
HanXRQChr07g0195411 Helianthus annuus
HanXRQChr13g0405591 Helianthus annuus
HanXRQChr15g0492441 Helianthus annuus
Haze_06056 Corylus avellana
Haze_06060 Corylus avellana
Haze_13775 Corylus avellana
Haze_20412 Corylus avellana
Hma1.2p1_0099F.1_g048650 Hydrangea macrophylla
Hma1.2p1_0270F.1_g108580 Hydrangea macrophylla
Hma1.2p1_0480F.1_g161850 Hydrangea macrophylla
HPP92_014581 Vanilla planifolia
Hund11777 Selenicereus undatus
Hund25080 Selenicereus undatus
Lalb_Chr01g0008951 Lupinus albus
Lalb_Chr01g0008961 Lupinus albus
Lalb_Chr01g0008971 Lupinus albus
Lalb_Chr01g0009071 Lupinus albus
Lalb_Chr01g0009081 Lupinus albus
Lalb_Chr03g0034211 Lupinus albus
Lalb_Chr15g0081421 Lupinus albus
Lalb_Chr16g0387611 Lupinus albus
Lalb_Chr19g0131101 Lupinus albus
Lj1C989T12 Lonicera japonica
Lj2g0003257 Lotus japonicus
Lj6g0002919 Lotus japonicus
Lj6g0014367 Lotus japonicus
Lj6g0024184 Lotus japonicus
Lj7A551T54 Lonicera japonica
Lj7C551T17 Lonicera japonica
Lj8A30G93 Lonicera japonica
Lj9A576T40 Lonicera japonica
Lsat_1_v5_gn_7_8200 Lactuca sativa
Lsat_1_v5_gn_8_7660 Lactuca sativa
Manes.01G013500 Manihot esculenta
Manes.06G142500 Manihot esculenta
Manes.10G082000 Manihot esculenta
Mapoly0165s0013 Marchantia polymorpha
MBI04_g40840_MAGBIO Magnolia biondii
MBI12_g02096_MAGBIO Magnolia biondii
MD00G1215500 Malus domestica
MD01G1195600 Malus domestica
MD02G1195200 Malus domestica
MD07G1262400 Malus domestica
Medtr6g465150 Medicago truncatula
Medtr8g028700 Medicago truncatula
Medtr8g032850 Medicago truncatula
MELO3C026622.2 Cucumis melo
Migut.B01676 Erythranthe guttata
Migut.F00387 Erythranthe guttata
MSTRG.17228 Avicennia marina
MSTRG.27142 Avicennia marina
MSTRG.8437 Avicennia marina
Nitab4.5_0004090g0060 Nicotiana tabacum
Nitab4.5_0007088g0030 Nicotiana tabacum
Nitab4.5_0007088g0040 Nicotiana tabacum
Nitab4.5_0017383g0010 Nicotiana tabacum
Nn6g34285 Nelumbo nucifera
Oeu005585.1 Olea europaea
Oeu008523.1 Olea europaea
Oeu030135.1 Olea europaea
Oeu047973.1 Olea europaea
Oeu047981.3 Olea europaea
Os01g0187500 Oryza sativa ssp. japonica
Os02g0677700 Oryza sativa ssp. japonica
Os03g0145600 Oryza sativa ssp. japonica
Os03g0145775 Oryza sativa ssp. japonica
Os04g0572700 Oryza sativa ssp. japonica
Peaxi162Scf00648g00315 Petunia axillaris
Peaxi162Scf01044g00028 Petunia axillaris
PGR031G1916 Punica granatum
PGR031G2114 Punica granatum
PGR031G2888 Punica granatum
PGR031G3982 Punica granatum
PGR142G2017 Punica granatum
PGSC0003DMG400014305 Solanum tuberosum
PGSC0003DMG400034374 Solanum tuberosum
Phvul.004G122600 Phaseolus vulgaris
Phvul.011G138800 Phaseolus vulgaris
Phvul.011G138801 Phaseolus vulgaris
Phvul.011G139625 Phaseolus vulgaris
Potri.012G134800 Populus trichocarpa
Potri.014G077800 Populus trichocarpa
Potri.015G137200 Populus trichocarpa
Pp3c13_16160 Physcomitrium patens
Pp3c3_19940 Physcomitrium patens
PRCOL_00000177 Prasinoderma coloniale
Prupe.2G102200 Prunus persica
Prupe.2G120800 Prunus persica
Prupe.2G153300 Prunus persica
Prupe.2G153400 Prunus persica
Prupe.2G288900 Prunus persica
Psat4g151480 Pisum sativum
Psat4g151520 Pisum sativum
Psat4g151560 Pisum sativum
Psat6g091800 Pisum sativum
Psat7g222160 Pisum sativum
PSO063G6203 Papaver somniferum
PSO210G2018 Papaver somniferum
PSO210G3220 Papaver somniferum
PSO478G1733 Papaver somniferum
PSO478G4066 Papaver somniferum
PSO782G0874 Papaver somniferum
PSO782G4288 Papaver somniferum
QL04p074113 Quercus lobata
QL04p074141 Quercus lobata
QL04p074163 Quercus lobata
QL04p074383 Quercus lobata
QL04p074394 Quercus lobata
QL04p074409 Quercus lobata
QL04p074452 Quercus lobata
QL08p029688 Quercus lobata
QL09p015433 Quercus lobata
QL10p022402 Quercus lobata
QL12p009147 Quercus lobata
QL12p009175 Quercus lobata
RcHm_v2.0_Chr1g0376561 Rosa chinensis
RcHm_v2.0_Chr3g0483051 Rosa chinensis
RcHm_v2.0_Chr3g0483061 Rosa chinensis
RcHm_v2.0_Chr3g0483601 Rosa chinensis
RcHm_v2.0_Chr3g0483611 Rosa chinensis
RcHm_v2.0_Chr4g0402321 Rosa chinensis
RcHm_v2.0_Chr6g0270771 Rosa chinensis
Rhsim03G0176000 Rhododendron simsii
Rhsim07G0021900 Rhododendron simsii
Rhsim07G0022000 Rhododendron simsii
Sabra12G0101400 Salix brachista
Sabra14G0054600 Salix brachista
Sabra15G0148800 Salix brachista
SalBow3G0129 Salvia bowleyana
SalBow4G0290 Salvia bowleyana
SalBow4G1278 Salvia bowleyana
Sc13g0008340 Simmondsia chinensis
Sc26g0001060 Simmondsia chinensis
Sc26g0001080 Simmondsia chinensis
Sed0005940 Sechium edule
Sed0006772 Sechium edule
SEGI_34732 Sequoiadendron giganteum
SGA_v2.0_scaffold153G37060 Striga asiatica
SGA_v2.0_scaffold221G42737 Striga asiatica
SGA_v2.0_scaffold2G01088 Striga asiatica
SHI35854 Sapria himalayana
SMO119G0037 Selaginella moellendorffii
SMO304G0128 Selaginella moellendorffii
Solyc03g026350.3 Solanum lycopersicum
Sopen03g005250 Solanum pennellii
Sp6g14230 Schrenkiella parvula
Sp7g01600 Schrenkiella parvula
Sp7g23490 Schrenkiella parvula
TAR375G0479 Trochodendron aralioides
TAR375G1020 Trochodendron aralioides
TAR623G0152 Trochodendron aralioides
TAR629G2728 Trochodendron aralioides
THA.LOC104798733 Tarenaya hassleriana
THA.LOC104811483 Tarenaya hassleriana
THA.LOC104811485 Tarenaya hassleriana
THA.LOC104817631 Tarenaya hassleriana
THA.LOC104818578 Tarenaya hassleriana
THA.LOC104823553 Tarenaya hassleriana
THA.LOC104825089 Tarenaya hassleriana
Thecc.01G139900 Theobroma cacao
Thecc.01G142900 Theobroma cacao
Thecc.01G155400 Theobroma cacao
Thecc.01G155700 Theobroma cacao
Thecc.01G155800 Theobroma cacao
Thecc.01G213400 Theobroma cacao
Thecc.03G169200 Theobroma cacao
Thhalv10013582m.g Eutrema salsugineum
Thhalv10025269m.g Eutrema salsugineum
Thhalv10027743m.g Eutrema salsugineum
Thhalv10027745m.g Eutrema salsugineum
TPR.G11 Trifolium pratense
TPR.G17575 Trifolium pratense
TPR.G20872 Trifolium pratense
TPR.G21927 Trifolium pratense
TPR.G32345 Trifolium pratense
TPR.G36605 Trifolium pratense
TPR.G39798 Trifolium pratense
TPR.G39799 Trifolium pratense
TPR.G3991 Trifolium pratense
TPR.G458 Trifolium pratense
TPR.G9190 Trifolium pratense
TWI12G0291 Tripterygium wilfordii
TWI14G1133 Tripterygium wilfordii
TWI23G0350 Tripterygium wilfordii
TWI74G0367 Tripterygium wilfordii
TWI77G1031 Tripterygium wilfordii
unitig_37.g11949 Utricularia gibba
unitig_8.g4600 Utricularia gibba
unitig_8.g4616 Utricularia gibba
vmacro06748 Vaccinium macrocarpon
vmacro13342 Vaccinium macrocarpon
vmacro13343 Vaccinium macrocarpon
vmacro13344 Vaccinium macrocarpon
VMungo0251G0192 Vigna mungo
VMungo0251G2289 Vigna mungo
VMungo0464G0868 Vigna mungo
VMungo0647G2189 Vigna mungo
VMungo1309G1186 Vigna mungo
VMungo1309G1729 Vigna mungo
Zm00001eb088450 Zea mays
Zm00001eb121510 Zea mays
Zm00001eb250580 Zea mays

User provided reference genes

Program Settings