Gene: Thhalv10027743m.g
General Information
Structural Information
- Species Eutrema salsugineum
- Gene Identifier Thhalv10027743m.g
- Transcript Identifier Thhalv10027743m
- Gene Type Coding gene
- Location scaffold_14 : 3539170-3541187 : positive
Gene Family Information
- ID HOM05D001335
- #Genes/#Species 472/99
- Phylogenetic origin
- ID ORTHO05D001184
- #Genes/#Species 463/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Thhalv10027743m.g.v1.0
- pacid 20189297
Descriptions
- Description PF00400//PF00642//PF11715 - WD domain, G-beta repeat (WD40) // Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Nucleoporin Nup120/160 (Nup160)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G40880 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000571 | Zinc finger, CCCH-type |
| IPR001680 | WD40 repeat |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR036855 | Zinc finger, CCCH-type superfamily |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR044715 | WD repeat-containing protein 86-like |
| Mapman id | Description |
|---|---|
| 15.5.16 | RNA biosynthesis.transcriptional regulation.transcription factor (C3H-ZF) |