Gene: Os02g0677700

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0677700
  • Transcript Identifier Os02t0677700-01
  • Gene Type Coding gene
  • Location chr02 : 27662711-27665088 : positive

Gene Family Information

  • ID HOM05D001335
  • #Genes/#Species 472/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0677700-01
  • MSU-ID LOC_Os02g45480.1
  • MSU-ID LOC_Os02g45480.2
  • MSU-ID LOC_Os02g45480.3
  • MSU-ID LOC_Os02g45480.4
  • uniprot Q0DYP5

Descriptions

  • Description Similar to Nucleic acid binding protein.
  • Description Similar to Isoform 2 of Zinc finger CCCH domain-containing protein 17.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0034511
IEA
GOA DatabaseU3 snoRNA binding
GO:0034511
IEA
InterProU3 snoRNA binding
GO:0030515
IBA
GOA DatabasesnoRNA binding
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G51980

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032040
IBA
GOA Databasesmall-subunit processome
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G40880

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036855 Zinc finger, CCCH-type superfamily
IPR039241 Ribosomal RNA-processing protein Rrp9-like
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR000571 Zinc finger, CCCH-type
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR041367 E3 ligase, CCCH-type zinc finger
IPR020472 G-protein beta WD-40 repeat
Mapman id Description
15.5.16 RNA biosynthesis.transcriptional regulation.transcription factor (C3H-ZF)