Gene: Pp3c3_19940
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c3_19940
- Transcript Identifier Pp3c3_19940V3.4
- Gene Type Coding gene
- Location Chr03 : 13678805-13681545 : negative
Gene Family Information
- ID HOM05D001335
- #Genes/#Species 472/99
- Phylogenetic origin
- ID ORTHO05D001184
- #Genes/#Species 463/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c3_19940V3.4
- pacid 32942656
- alias Phpat.003G078100
- alias Phypa_3703
- alias Pp1s204_77V6
- uniprot A0A2K1KV77
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G51980 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G40880 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001680 | WD40 repeat |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR044715 | WD repeat-containing protein 86-like |
| IPR036855 | Zinc finger, CCCH-type superfamily |
| IPR000571 | Zinc finger, CCCH-type |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR036322 | WD40-repeat-containing domain superfamily |
| Mapman id | Description |
|---|---|
| 15.5.16 | RNA biosynthesis.transcriptional regulation.transcription factor (C3H-ZF) |