Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 1.7e-247 859.0 458 100.0
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 2.2e-162 576.2 454 72.9
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 9.1e-153 544.3 455 69.7
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.7e-151 540.0 441 70.1
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 1.0e-143 514.2 467 65.3
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 4.3e-134 482.3 450 62.9
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 2.3e-132 476.5 460 60.4
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 3.0e-132 476.1 447 60.6
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 4.0e-132 475.7 448 60.3
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 6.8e-132 474.9 445 63.6
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 2.2e-130 469.9 431 61.3
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 2.9e-130 469.5 456 59.0
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 4.9e-130 468.8 447 59.5
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 8.3e-130 468.0 453 61.6
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 1.4e-129 467.2 454 61.0
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 4.1e-129 465.7 445 62.7
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.6e-128 463.8 463 59.0
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.0e-128 463.4 452 60.0
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.0e-128 463.4 452 60.0
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 2.7e-128 463.0 455 60.4
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 5.9e-128 461.8 451 59.2
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 5.9e-128 461.8 452 59.7
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 7.8e-128 461.5 459 60.1
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 1.3e-127 460.7 463 60.5
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 2.3e-127 459.9 452 59.7
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 2.3e-127 459.9 463 60.7
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 3.0e-127 459.5 448 57.6
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 6.6e-127 458.4 497 55.3
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 8.6e-127 458.0 455 60.9
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 2.5e-126 456.4 444 61.5
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 3.3e-126 456.1 444 58.8
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 7.3e-126 454.9 441 61.2
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 9.5e-126 454.5 445 58.2
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 3.6e-125 452.6 441 61.5
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 6.2e-125 451.8 452 58.8
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 3.1e-124 449.5 456 58.8
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 5.2e-124 448.7 454 59.9
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 2.0e-123 446.8 433 60.5
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 4.4e-123 445.7 453 59.6
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 4.4e-123 445.7 428 61.0
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 7.5e-123 444.9 452 56.6
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 3.7e-122 442.6 431 61.5
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 4.9e-122 442.2 436 59.9
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 6.4e-122 441.8 461 56.6
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 1.1e-121 441.0 459 56.0
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 1.1e-121 441.0 441 57.4
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 1.9e-121 440.3 277 78.7
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 1.6e-120 437.2 443 56.7
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 2.0e-120 436.8 448 59.2
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 3.5e-120 436.0 456 58.1
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 3.5e-120 436.0 459 59.0
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 4.6e-120 435.6 438 59.1
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.0e-119 434.5 450 55.8
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 3.9e-119 432.6 433 57.3
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 5.6e-118 428.7 437 58.8
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 1.6e-117 427.2 458 54.4
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 1.1e-116 424.5 442 58.1
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 1.8e-116 423.7 466 54.7
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.8e-116 423.7 372 62.1
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 1.8e-116 423.7 429 61.1
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 2.3e-116 423.3 462 53.9
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.1e-116 422.9 450 56.7
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 5.2e-116 422.2 457 53.4
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 1.5e-115 420.6 439 54.9
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 1.5e-115 420.6 439 54.9
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 4.4e-115 419.1 448 55.6
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 7.5e-115 418.3 447 54.6
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 3.7e-114 416.0 439 54.7
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 4.9e-114 415.6 437 55.4
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 4.9e-114 415.6 421 57.5
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 4.9e-114 415.6 421 57.5
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.1e-113 414.5 442 57.7
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 9.2e-113 411.4 449 56.1
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 7.8e-112 408.3 450 53.1
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 7.8e-112 408.3 444 53.8
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.1e-110 404.4 276 74.6
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.1e-110 404.4 276 75.4
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 1.1e-108 397.9 430 53.3
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 8.9e-108 394.8 455 52.1
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.3e-106 391.0 256 75.4
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 3.2e-105 386.3 372 55.9
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 4.1e-105 386.0 434 52.3
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 4.1e-105 386.0 213 86.4
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 9.2e-105 384.8 439 51.7
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 8.7e-103 378.3 472 51.1
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 2.4e-100 370.2 481 50.9
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 4.0e-100 369.4 349 61.6
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 6.9e-100 368.6 469 51.6
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 5.8e-99 365.5 347 60.5
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 1.7e-98 364.0 462 52.2
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 3.8e-98 362.8 345 60.6
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 1.1e-97 361.3 348 58.9
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 9.3e-97 358.2 354 56.8
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 7.8e-96 355.1 258 67.4
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.3e-93 347.8 252 72.2
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 6.7e-87 325.5 465 47.3
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 1.1e-84 318.2 191 78.0
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 1.1e-84 318.2 244 69.3
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 6.9e-84 315.5 198 81.8
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 9.0e-84 315.1 341 56.0
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 2.2e-82 310.5 397 48.9
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 2.9e-82 310.1 404 45.8
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.4e-81 307.0 302 56.3
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 5.5e-81 305.8 464 47.0
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 7.9e-80 302.0 343 50.1
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 1.4e-76 291.2 456 43.4
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 6.5e-74 282.3 308 54.2
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.3e-66 258.1 214 65.0
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 6.7e-63 245.7 256 55.1
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 8.2e-61 238.8 216 58.3
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 1.3e-58 231.5 195 54.9
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.9e-57 227.6 269 51.7
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 6.3e-53 212.6 339 38.9
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 1.6e-40 171.4 175 46.3
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 3.1e-36 157.1 274 34.7
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 6.1e-32 142.9 201 38.8
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 6.1e-24 116.3 202 37.6
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 2.0e-22 111.3 225 37.8
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 2.0e-19 101.3 67 73.1
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 3.7e-13 80.5 106 50.9
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.2e-11 75.5 43 72.1
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 8.6e-10 69.3 120 40.8
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 9.5e-09 65.9 39 76.9
Atru.chr11.1544 Acer truncatum HOM05D006305 ORTHO05D007984 1.4e-07 62.0 74 55.4


User provided reference genes

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