Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 0.0e+00 2184.1 1091 100.0
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 0.0e+00 1892.5 1081 88.8
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1792.7 1088 82.6
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1736.5 1099 80.1
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 0.0e+00 1688.3 1091 75.4
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 0.0e+00 1683.7 1101 76.1
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 0.0e+00 1677.9 1105 75.1
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 0.0e+00 1666.7 1091 76.1
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1649.8 1087 75.2
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 0.0e+00 1647.5 1087 74.4
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 0.0e+00 1646.7 1091 74.5
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 0.0e+00 1638.2 1099 74.3
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1633.2 1091 74.2
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1631.3 1088 74.5
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 0.0e+00 1625.9 1092 72.9
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 0.0e+00 1623.2 1093 74.0
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 0.0e+00 1609.0 1091 72.9
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 0.0e+00 1607.0 1094 74.2
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1605.1 1092 75.5
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1602.0 1117 72.2
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 0.0e+00 1600.5 1072 74.6
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 0.0e+00 1598.2 1088 73.4
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 0.0e+00 1591.6 1117 71.6
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 0.0e+00 1578.5 1024 75.7
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 0.0e+00 1576.6 1094 72.7
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1573.5 1094 72.7
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1557.0 1118 70.1
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 0.0e+00 1552.7 1086 71.0
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 0.0e+00 1550.4 1002 76.5
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1548.9 1100 71.5
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 0.0e+00 1546.2 1088 71.3
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 0.0e+00 1533.9 1137 67.8
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1533.9 1090 71.5
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 0.0e+00 1525.4 1106 69.3
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 0.0e+00 1521.1 1099 69.5
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 0.0e+00 1518.8 1193 67.1
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 0.0e+00 1514.2 1089 69.1
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 0.0e+00 1513.4 1092 70.4
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 0.0e+00 1511.1 1087 69.6
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 0.0e+00 1511.1 1096 69.3
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 0.0e+00 1508.8 1090 69.4
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1507.3 1088 70.5
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 0.0e+00 1505.3 1095 69.0
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 0.0e+00 1503.8 1102 68.5
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 0.0e+00 1501.5 1210 63.7
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1500.7 1080 70.4
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 0.0e+00 1497.6 1116 67.4
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1494.6 1090 69.0
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1493.0 1090 68.9
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 0.0e+00 1489.6 1090 68.4
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 1487.6 1090 68.4
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 0.0e+00 1484.9 1090 68.0
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 0.0e+00 1484.5 1087 68.7
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1484.2 1145 66.9
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 0.0e+00 1481.5 1090 68.7
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 0.0e+00 1480.3 1093 69.1
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 0.0e+00 1479.2 1090 68.2
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1478.8 1087 68.7
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 0.0e+00 1477.6 1090 68.4
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1477.6 1099 67.1
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 0.0e+00 1475.7 1148 65.9
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 0.0e+00 1474.5 1090 67.9
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 0.0e+00 1473.4 1087 68.0
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1473.4 1092 69.0
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 0.0e+00 1471.8 1125 66.4
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1470.7 1099 67.7
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1469.9 1094 66.9
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 0.0e+00 1468.4 1098 69.0
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 0.0e+00 1464.1 1128 66.3
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 1458.7 1103 66.8
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1453.0 1122 66.9
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1448.7 1087 66.1
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1446.4 1056 67.3
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 0.0e+00 1444.5 872 79.4
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 0.0e+00 1442.6 1040 68.9
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1441.0 1006 74.2
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1439.1 1015 73.9
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 0.0e+00 1418.3 887 78.1
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 0.0e+00 1410.6 820 83.9
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1408.7 1088 67.1
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 0.0e+00 1392.1 872 77.4
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 0.0e+00 1389.4 1176 61.7
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 0.0e+00 1384.0 859 77.4
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 0.0e+00 1377.8 848 78.7
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 0.0e+00 1372.8 1088 63.0
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 0.0e+00 1370.5 1212 60.0
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 0.0e+00 1354.7 871 75.3
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 0.0e+00 1343.2 937 71.3
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 0.0e+00 1339.3 1090 62.8
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 0.0e+00 1335.1 875 74.7
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 0.0e+00 1302.3 825 75.8
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 0.0e+00 1284.6 1091 61.2
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 0.0e+00 1266.9 864 71.6
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1256.9 1046 62.1
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1187.9 1090 58.5
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 0.0e+00 1173.3 1069 57.4
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 0.0e+00 1152.5 700 80.3
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1130.2 868 65.4
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 8.8e-287 990.7 903 56.8
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 1.7e-282 976.5 641 73.6
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 3.9e-279 965.3 598 78.9
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 8.8e-271 937.6 1116 46.8
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 4.4e-270 935.3 1115 46.7
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.0e-247 860.9 714 62.2
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 1.4e-247 860.5 969 47.5
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 8.4e-221 771.5 951 44.2
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 4.5e-206 722.6 516 70.0
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 1.6e-203 714.1 539 67.9
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 1.4e-164 584.7 472 63.3
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.5e-156 558.1 405 70.4
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 2.0e-153 547.7 1079 35.0
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 4.5e-142 510.0 405 66.4
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 8.9e-130 469.2 321 71.7
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 3.6e-123 447.2 389 57.3
Cpa.g.sc169.28 Carica papaya HOM05D001849 ORTHO05D004689 2.1e-91 341.7 245 68.6
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 1.6e-83 315.5 220 73.6
CSS0033574 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.7e-77 293.5 225 67.6
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 7.4e-76 290.0 292 53.4
CSS0020573 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.8e-74 285.4 233 64.8
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.2e-64 251.9 181 73.5
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 2.5e-63 248.4 174 70.1
Glyma.16G010300 Glycine max HOM05D001849 ORTHO05D004689 1.2e-62 246.1 171 72.5
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 5.1e-61 240.7 226 61.5
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 2.8e-59 235.0 220 58.6
CSS0019722 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.7e-56 225.7 194 65.5
TAR730G0002 Trochodendron aralioides HOM05D001849 ORTHO05D004689 2.4e-50 205.3 154 69.5
Duzib235G0009 Durio zibethinus HOM05D001849 ORTHO05D004689 5.5e-47 194.1 174 61.5
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 9.4e-47 193.4 191 57.1
HPP92_021920 Vanilla planifolia HOM05D001849 ORTHO05D004689 1.6e-46 192.6 144 66.0
SEGI_09459 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 3.1e-42 178.3 176 51.7
CDE07G1706 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 3.5e-41 174.9 212 48.1
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 5.0e-40 171.0 100 79.0
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.9e-39 169.1 100 78.0
Hund18673 Selenicereus undatus HOM05D001849 ORTHO05D004689 4.7e-38 164.5 177 57.1
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 2.0e-36 159.1 163 52.1
MBI18_g40032_MAGBIO Magnolia biondii HOM05D000132 ORTHO05D000058 7.5e-36 157.1 95 74.7
Cpa.g.sc169.33 Carica papaya HOM05D001849 ORTHO05D004689 1.3e-35 156.4 181 51.4
Cpa.g.sc169.31 Carica papaya HOM05D001849 ORTHO05D004689 2.1e-30 139.0 84 75.0
Lsat_1_v5_gn_8_46020 Lactuca sativa HOM05D001849 ORTHO05D004689 2.7e-30 138.7 95 74.7
HanXRQChr11g0341991 Helianthus annuus HOM05D001849 ORTHO05D004689 1.4e-29 136.3 90 71.1
SEGI_30532 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 6.8e-29 134.0 108 60.2
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.1e-26 125.2 100 62.0
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 1.0e-24 120.2 99 60.6
Atru.chr12.2396 Acer truncatum HOM05D001849 ORTHO05D004689 4.2e-23 114.8 143 50.3
PRCOL_00005073 Prasinoderma coloniale HOM05D001849 ORTHO05D004689 4.2e-23 114.8 425 27.5
Hma1.2p1_0225F.1_g094790 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.2e-22 113.2 143 49.0
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 2.8e-22 112.1 172 40.7
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 1.0e-21 110.2 73 72.6
MCO04G165 Micromonas commoda HOM05D001849 ORTHO05D004689 2.6e-20 105.5 530 24.9
Cre10.g425675 Chlamydomonas reinhardtii HOM05D001849 ORTHO05D004689 4.4e-20 104.8 314 26.4
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 2.2e-19 102.4 111 52.3
BcaNung06672 Brassica carinata HOM05D001849 ORTHO05D004689 4.1e-18 98.2 210 34.8
MBI04_g26258_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 5.0e-16 91.3 81 56.8
MBI03_g16538_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.5e-15 89.7 67 61.2
MBI13_g27860_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 9.5e-15 87.0 53 73.6
Hma1.2p1_0436F.1_g152830 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.8e-14 85.5 63 66.7
MBI15_g17575_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 4.7e-14 84.7 53 71.7
C02p44100 Brassica napus HOM05D001849 ORTHO05D004689 3.1e-13 82.0 54 74.1
BolC2t10453H Brassica oleracea HOM05D001849 ORTHO05D004689 3.1e-13 82.0 54 75.9
Zm00001eb307710 Zea mays HOM05D001849 ORTHO05D004689 1.7e-11 76.3 74 58.1
CSS0017686 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.4e-10 72.4 50 64.0
Atru.chr12.2376 Acer truncatum HOM05D001849 ORTHO05D004689 7.0e-10 70.9 100 49.0
SMO304G0058 Selaginella moellendorffii HOM05D042764 ORTHO05D004689 3.5e-09 68.6 192 28.1
CSS0002239 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.0e-08 67.0 41 75.6
SGA_v2.0_scaffold7G03828 Striga asiatica HOM05D016705 ORTHO05D004689 5.6e-07 61.2 111 35.1
SEGI_26020 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 3.6e-06 58.5 134 32.1
Actinidia08004 Actinidia chinensis HOM05D001849 ORTHO05D004689 6.2e-06 57.8 36 77.8


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