Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 3.4e-72 275.0 151 100.0
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 1.2e-45 186.8 180 65.6
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 3.9e-44 181.8 135 68.1
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 1.5e-43 179.9 136 66.9
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 2.8e-42 175.6 135 65.2
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 4.8e-42 174.9 135 65.9
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 3.1e-41 172.2 105 79.0
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 1.2e-40 170.2 141 61.7
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 1.2e-40 170.2 105 78.1
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 2.0e-40 169.5 135 63.0
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 2.6e-40 169.1 134 64.9
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 5.9e-40 167.9 135 61.5
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 1.0e-39 167.2 135 62.2
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 6.5e-39 164.5 133 63.9
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 6.5e-39 164.5 135 63.0
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 3.2e-38 162.2 146 60.3
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 3.2e-38 162.2 105 72.4
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 3.2e-38 162.2 105 74.3
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 7.2e-38 161.0 127 61.4
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 9.3e-38 160.6 103 73.8
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 9.3e-38 160.6 131 61.1
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 1.6e-37 159.8 105 72.4
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 3.6e-37 158.7 105 71.4
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 3.6e-37 158.7 105 68.6
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 6.1e-37 157.9 103 71.8
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 6.1e-37 157.9 103 71.8
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 6.1e-37 157.9 105 72.4
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 6.1e-37 157.9 102 72.5
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 7.9e-37 157.5 105 71.4
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 7.9e-37 157.5 105 70.5
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 7.9e-37 157.5 105 71.4
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 1.0e-36 157.1 102 72.5
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 1.3e-36 156.8 125 60.0
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 3.0e-36 155.6 131 60.3
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 3.9e-36 155.2 101 73.3
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 3.9e-36 155.2 101 73.3
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 6.7e-36 154.5 105 72.4
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 6.7e-36 154.5 104 71.2
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 1.1e-35 153.7 105 68.6
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 1.9e-35 152.9 105 67.6
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 2.5e-35 152.5 105 69.5
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 5.7e-35 151.4 101 70.3
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 5.7e-35 151.4 105 67.6
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 5.7e-35 151.4 131 60.3
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 7.4e-35 151.0 101 71.3
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 7.4e-35 151.0 101 71.3
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 7.4e-35 151.0 101 71.3
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 7.4e-35 151.0 101 71.3
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 7.4e-35 151.0 101 71.3
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 9.7e-35 150.6 105 67.6
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 9.7e-35 150.6 101 69.3
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 9.7e-35 150.6 101 69.3
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 1.3e-34 150.2 101 69.3
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 1.6e-34 149.8 104 68.3
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 1.6e-34 149.8 105 70.5
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 2.8e-34 149.1 105 68.6
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 4.8e-34 148.3 101 70.3
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 4.8e-34 148.3 101 70.3
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 6.3e-34 147.9 101 70.3
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 6.3e-34 147.9 125 59.2
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 6.3e-34 147.9 105 68.6
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 6.3e-34 147.9 101 71.3
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 8.2e-34 147.5 105 65.7
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 1.1e-33 147.1 138 58.0
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 1.4e-33 146.7 104 68.3
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 2.4e-33 146.0 101 66.3
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.4e-33 146.0 103 69.9
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 2.4e-33 146.0 103 70.9
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 2.4e-33 146.0 101 69.3
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 4.1e-33 145.2 103 68.9
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 4.1e-33 145.2 105 66.7
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 5.3e-33 144.8 105 69.5
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 5.3e-33 144.8 103 68.9
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 6.9e-33 144.4 103 68.0
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 9.1e-33 144.1 101 67.3
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.5e-32 143.3 103 68.0
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 2.0e-32 142.9 101 67.3
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 3.4e-32 142.1 103 68.0
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 7.7e-32 141.0 107 63.6
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 7.7e-32 141.0 103 62.1
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 8.5e-31 137.5 104 63.5
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 1.4e-30 136.7 101 66.3
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 1.4e-30 136.7 104 63.5
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 2.5e-30 136.0 101 69.3
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 4.2e-30 135.2 104 61.5
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 5.5e-30 134.8 101 69.3
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 5.5e-30 134.8 101 65.3
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 2.7e-29 132.5 102 64.7
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 2.3e-28 129.4 104 63.5
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 2.3e-28 129.4 106 57.5
BcaNung04417 Brassica carinata HOM05D000343 ORTHO05D003187 5.1e-28 128.3 101 60.4
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 4.4e-27 125.2 106 59.4
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 2.2e-26 122.9 101 62.4
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 2.8e-26 122.5 108 55.6
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 1.5e-24 116.7 103 57.3
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 2.6e-24 115.9 104 55.8
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 6.5e-23 111.3 104 52.9
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 2.1e-21 106.3 70 68.6
CSS0024385 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 3.6e-21 105.5 92 63.0
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 1.0e-20 104.0 108 46.3
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 5.2e-20 101.7 73 69.9
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 2.8e-18 95.9 53 88.7
Prupe.2G099800 Prunus persica HOM05D004944 ORTHO05D005989 4.8e-18 95.1 62 67.7
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 5.3e-17 91.7 54 83.3
Lj9A645G79 Lonicera japonica HOM05D004944 ORTHO05D005989 7.0e-17 91.3 67 67.2
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 4.5e-16 88.6 54 81.5
Peaxi162Scf00309g00011 Petunia axillaris HOM05D004944 ORTHO05D005989 4.5e-16 88.6 53 79.2
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 5.9e-16 88.2 53 79.2
SHI03976 Sapria himalayana HOM05D004944 ORTHO05D005989 1.0e-15 87.4 55 72.7
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 5.0e-15 85.1 101 45.5
Psat5g213680 Pisum sativum HOM05D004944 ORTHO05D005989 1.6e-13 80.1 53 67.9
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 1.8e-12 76.6 52 65.4
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 1.2e-11 73.9 96 42.7
MCO01G407 Micromonas commoda HOM05D004944 ORTHO05D005989 1.2e-11 73.9 118 37.3
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 3.3e-11 72.4 94 42.6
Cre12.g555050 Chlamydomonas reinhardtii HOM05D004944 ORTHO05D005989 3.7e-10 68.9 111 38.7
Sc10g0004230 Simmondsia chinensis HOM05D004944 ORTHO05D005989 2.4e-09 66.2 53 58.5
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 3.1e-09 65.9 49 59.2


User provided reference genes

Program Settings