Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 4.0e-22 107.5 65 100.0
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 1.9e-19 98.6 65 83.1
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 6.0e-18 93.6 65 75.4
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 6.0e-18 93.6 65 75.4
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 1.8e-17 92.0 65 73.8
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 5.1e-17 90.5 65 73.8
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 8.7e-17 89.7 65 72.3
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 3.3e-16 87.8 65 70.8
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 4.3e-16 87.4 65 70.8
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 5.7e-16 87.0 65 72.3
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 5.7e-16 87.0 64 71.9
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 1.3e-15 85.9 65 69.2
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.3e-15 85.9 65 69.2
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.3e-15 85.9 65 69.2
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 1.3e-15 85.9 65 69.2
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.3e-15 85.9 46 91.3
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 1.6e-15 85.5 65 69.2
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 2.1e-15 85.1 46 91.3
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 2.8e-15 84.7 46 89.1
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 2.8e-15 84.7 65 67.7
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 3.7e-15 84.3 65 66.2
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 3.7e-15 84.3 65 69.2
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 4.8e-15 84.0 65 67.7
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 4.8e-15 84.0 45 91.1
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 6.3e-15 83.6 65 69.2
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 6.3e-15 83.6 65 64.6
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 6.3e-15 83.6 65 67.7
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 8.2e-15 83.2 65 66.2
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 8.2e-15 83.2 63 69.8
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 8.2e-15 83.2 46 87.0
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 8.2e-15 83.2 46 87.0
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 1.4e-14 82.4 65 64.6
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 1.4e-14 82.4 65 66.2
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 1.4e-14 82.4 65 64.6
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 1.4e-14 82.4 46 87.0
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 1.4e-14 82.4 65 67.7
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 1.8e-14 82.0 65 66.2
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 1.8e-14 82.0 65 64.6
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 1.8e-14 82.0 65 64.6
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 1.8e-14 82.0 65 64.6
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.8e-14 82.0 65 64.6
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 1.8e-14 82.0 65 64.6
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 1.8e-14 82.0 65 69.2
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 1.8e-14 82.0 65 67.7
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 1.8e-14 82.0 65 64.6
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 2.4e-14 81.6 65 66.2
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 3.1e-14 81.3 64 67.2
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 4.1e-14 80.9 64 67.2
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 4.1e-14 80.9 65 64.6
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 4.1e-14 80.9 64 64.1
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 6.9e-14 80.1 45 86.7
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 6.9e-14 80.1 63 66.7
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 1.5e-13 79.0 64 65.6
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 2.0e-13 78.6 65 63.1
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 2.6e-13 78.2 46 84.8
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 3.4e-13 77.8 65 63.1
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 3.4e-13 77.8 65 63.1
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 4.5e-13 77.4 63 65.1
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 4.5e-13 77.4 46 80.4
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 4.5e-13 77.4 46 78.3
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 5.9e-13 77.0 64 64.1
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 5.9e-13 77.0 64 67.2
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 7.6e-13 76.6 45 82.2
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 7.6e-13 76.6 46 80.4
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 7.6e-13 76.6 65 63.1
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 1.0e-12 76.3 46 80.4
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 1.3e-12 75.9 64 64.1
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 1.3e-12 75.9 63 65.1
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 1.3e-12 75.9 63 65.1
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.7e-12 75.5 46 80.4
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 1.7e-12 75.5 65 61.5
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.7e-12 75.5 65 61.5
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.7e-12 75.5 65 61.5
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.7e-12 75.5 65 61.5
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.7e-12 75.5 65 61.5
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 2.2e-12 75.1 95 50.5
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 2.9e-12 74.7 65 67.7
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 3.8e-12 74.3 64 64.1
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 3.8e-12 74.3 46 78.3
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 6.5e-12 73.6 65 61.5
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 1.1e-11 72.8 45 80.0
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 1.1e-11 72.8 64 64.1
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 1.4e-11 72.4 46 76.1
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 2.5e-11 71.6 64 60.9
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 3.2e-11 71.2 65 58.5
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 4.2e-11 70.9 65 58.5
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 1.2e-10 69.3 90 48.9
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 4.6e-10 67.4 46 65.2
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 4.6e-10 67.4 46 65.2
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 6.1e-10 67.0 46 67.4
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 6.1e-10 67.0 46 69.6
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 6.1e-10 67.0 64 59.4
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 7.9e-10 66.6 65 56.9
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 7.9e-10 66.6 42 76.2
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 1.3e-09 65.9 65 55.4
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 8.2e-07 56.6 44 54.5
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 1.4e-06 55.8 45 55.6
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 5.3e-06 53.9 40 62.5


User provided reference genes

Program Settings