Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08837 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 2.7e-109 398.7 203 100.0
vmacro06812 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 4.1e-65 251.9 144 86.8
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 3.9e-55 218.8 150 73.3
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 3.9e-55 218.8 141 77.3
GSVIVG01000874001 Vitis vinifera HOM05D001670 ORTHO05D002980 1.8e-52 209.9 151 72.2
CSS0049488 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 4.0e-52 208.8 148 70.9
Cpa.g.sc587.1 Carica papaya HOM05D001670 ORTHO05D002980 7.6e-51 204.5 149 69.8
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 1.3e-50 203.8 151 68.2
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.7e-50 203.4 152 67.8
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.7e-50 203.4 152 67.8
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 1.7e-50 203.4 152 67.8
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 1.7e-50 203.4 149 69.1
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 2.9e-50 202.6 172 63.4
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 3.8e-50 202.2 151 67.5
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 4.9e-50 201.8 149 69.1
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 6.4e-50 201.4 151 67.5
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 6.4e-50 201.4 148 67.6
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 8.4e-50 201.1 149 69.1
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 8.4e-50 201.1 149 69.1
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 8.4e-50 201.1 149 69.1
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 1.1e-49 200.7 149 68.5
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 1.1e-49 200.7 149 67.8
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 1.1e-49 200.7 149 67.8
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 1.4e-49 200.3 149 68.5
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 1.4e-49 200.3 150 68.0
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 1.4e-49 200.3 149 68.5
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 1.9e-49 199.9 152 67.1
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 3.2e-49 199.1 190 56.8
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 3.2e-49 199.1 149 67.8
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 3.2e-49 199.1 151 66.9
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 3.2e-49 199.1 151 66.9
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 3.2e-49 199.1 151 66.9
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 3.2e-49 199.1 151 66.9
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 3.2e-49 199.1 151 66.9
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 3.2e-49 199.1 151 66.9
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 3.2e-49 199.1 149 67.8
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 4.2e-49 198.7 149 68.5
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 5.4e-49 198.4 146 67.8
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 7.1e-49 198.0 149 67.8
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 7.1e-49 198.0 149 67.8
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 9.3e-49 197.6 149 67.1
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 1.2e-48 197.2 149 66.4
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 1.6e-48 196.8 149 67.1
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 1.6e-48 196.8 149 67.8
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 1.6e-48 196.8 149 67.1
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 2.1e-48 196.4 150 64.7
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 2.1e-48 196.4 151 65.6
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 2.1e-48 196.4 145 69.0
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 2.7e-48 196.1 151 65.6
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 2.7e-48 196.1 152 65.8
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 2.7e-48 196.1 167 62.3
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 3.5e-48 195.7 151 68.2
Gohir.D11G082333 Gossypium hirsutum HOM05D001670 ORTHO05D002980 3.5e-48 195.7 152 65.8
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 3.5e-48 195.7 154 66.2
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 3.5e-48 195.7 151 66.2
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 4.6e-48 195.3 149 67.8
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 4.6e-48 195.3 151 64.9
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 4.6e-48 195.3 149 67.1
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 6.0e-48 194.9 149 66.4
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 6.0e-48 194.9 149 65.8
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 7.9e-48 194.5 151 65.6
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 7.9e-48 194.5 149 66.4
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 7.9e-48 194.5 159 64.2
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 7.9e-48 194.5 149 65.8
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 7.9e-48 194.5 149 66.4
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 7.9e-48 194.5 149 65.8
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.0e-47 194.1 152 65.1
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 1.0e-47 194.1 151 65.6
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 1.0e-47 194.1 151 65.6
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 1.0e-47 194.1 149 67.1
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 1.7e-47 193.4 148 64.9
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 1.7e-47 193.4 149 65.8
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.7e-47 193.4 148 64.9
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 1.7e-47 193.4 149 65.8
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 1.7e-47 193.4 149 65.8
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 1.7e-47 193.4 149 66.4
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 1.7e-47 193.4 149 65.8
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 1.7e-47 193.4 147 67.3
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 2.3e-47 193.0 149 65.8
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 2.3e-47 193.0 151 64.2
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 2.3e-47 193.0 147 67.3
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 2.3e-47 193.0 159 64.2
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 3.0e-47 192.6 150 62.7
BcaNung05287 Brassica carinata HOM05D001670 ORTHO05D002980 3.9e-47 192.2 149 65.1
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 3.9e-47 192.2 149 65.1
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 3.9e-47 192.2 149 65.1
Haze_02720 Corylus avellana HOM05D001670 ORTHO05D002980 3.9e-47 192.2 155 62.6
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 5.1e-47 191.8 159 63.5
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 6.6e-47 191.4 149 65.8
Lj7C538T12 Lonicera japonica HOM05D001670 ORTHO05D002980 6.6e-47 191.4 149 65.1
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 6.6e-47 191.4 149 65.1
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 6.6e-47 191.4 148 63.5
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 8.7e-47 191.0 149 65.1
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 8.7e-47 191.0 154 64.3
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 1.1e-46 190.7 151 64.9
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 1.5e-46 190.3 149 64.4
A09p69250 Brassica napus HOM05D001670 ORTHO05D002980 1.5e-46 190.3 149 65.1
C08p54070 Brassica napus HOM05D001670 ORTHO05D002980 1.5e-46 190.3 149 65.1
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 1.5e-46 190.3 149 65.1
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 1.5e-46 190.3 149 65.1
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 1.5e-46 190.3 149 65.8
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 1.9e-46 189.9 149 65.1
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 1.9e-46 189.9 149 65.1
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 1.9e-46 189.9 154 63.0
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 2.5e-46 189.5 149 64.4
Oeu064576.1 Olea europaea HOM05D001670 ORTHO05D002980 2.5e-46 189.5 149 63.8
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 3.3e-46 189.1 150 61.3
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 4.3e-46 188.7 161 59.0
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 4.3e-46 188.7 154 63.0
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 4.3e-46 188.7 159 62.3
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 5.6e-46 188.3 153 62.7
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 7.3e-46 188.0 161 60.9
Psat4g209440 Pisum sativum HOM05D001670 ORTHO05D002980 7.3e-46 188.0 161 60.9
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 9.6e-46 187.6 149 63.8
Hma1.2p1_0341F.1_g130260 Hydrangea macrophylla HOM05D001670 ORTHO05D002980 1.6e-45 186.8 149 63.1
AUR62013711 Chenopodium quinoa HOM05D001670 ORTHO05D002980 2.8e-45 186.0 145 64.8
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 4.8e-45 185.3 149 62.4
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 4.8e-45 185.3 149 62.4
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 4.8e-45 185.3 149 62.4
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 4.8e-45 185.3 148 62.2
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 6.2e-45 184.9 149 63.1
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 1.1e-44 184.1 149 61.7
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 1.1e-44 184.1 149 61.7
AUR62004150 Chenopodium quinoa HOM05D001670 ORTHO05D002980 1.1e-44 184.1 145 64.8
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 1.8e-44 183.3 150 63.3
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.8e-44 183.3 149 63.8
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 2.4e-44 183.0 148 64.9
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 2.4e-44 183.0 149 62.4
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 2.4e-44 183.0 148 62.2
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 9.0e-44 181.0 151 61.6
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 1.2e-43 180.6 150 62.7
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 1.5e-43 180.3 144 64.6
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 1.5e-43 180.3 148 61.5
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 2.0e-43 179.9 162 56.2
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 3.4e-43 179.1 149 61.1
Glyma.03G118200 Glycine max HOM05D001670 ORTHO05D002980 7.6e-43 177.9 149 62.4
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 4.9e-42 175.3 163 55.2
Pp3c6_26730 Physcomitrium patens HOM05D001670 ORTHO05D002980 4.9e-42 175.3 162 54.9
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 6.4e-42 174.9 148 60.8
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 2.4e-41 172.9 145 62.1
Actinidia20640 Actinidia chinensis HOM05D001670 ORTHO05D002980 4.2e-41 172.2 144 63.2
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 4.6e-40 168.7 154 56.5
Os03g0102366 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 7.9e-40 167.9 155 55.5
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 1.0e-39 167.5 149 59.1
SHI13576 Sapria himalayana HOM05D001670 ORTHO05D002980 1.3e-39 167.2 170 52.9
CSS0024648 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 3.3e-38 162.5 144 59.0
Thecc.03G154100 Theobroma cacao HOM05D001670 ORTHO05D002980 1.3e-37 160.6 148 58.1
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 1.6e-37 160.2 144 52.8
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 2.8e-37 159.5 149 57.7
BraA09t35680Z Brassica rapa HOM05D001670 ORTHO05D002980 2.4e-36 156.4 149 53.0
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 4.0e-36 155.6 120 67.5
MD07G1112800 Malus domestica HOM05D001670 ORTHO05D002980 1.2e-35 154.1 140 59.3
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 5.8e-35 151.8 158 51.9
Lsat_1_v5_gn_4_44320 Lactuca sativa HOM05D001670 ORTHO05D002980 6.5e-34 148.3 149 51.0
C09p00060 Brassica napus HOM05D001670 ORTHO05D002980 3.5e-32 142.5 149 50.3
CSS0042972 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 3.5e-32 142.5 99 72.7
Lsat_1_v5_gn_9_55460 Lactuca sativa HOM05D001670 ORTHO05D016190 6.7e-31 138.3 118 61.9
CDE11G1219 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 8.7e-31 137.9 123 59.3
AagrBONN_evm.TU.Sc2ySwM_362.1757 Anthoceros agrestis HOM05D001670 ORTHO05D002980 6.3e-29 131.7 148 46.6
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 8.2e-29 131.3 159 47.2
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 2.6e-27 126.3 121 57.9
ECA234G0500 Erigeron canadensis HOM05D001670 ORTHO05D002980 2.6e-27 126.3 149 44.3
Cre14.g632950 Chlamydomonas reinhardtii HOM05D001670 ORTHO05D002980 7.6e-27 124.8 164 41.5
Actinidia00132 Actinidia chinensis HOM05D001670 ORTHO05D010670 1.1e-25 120.9 132 52.3
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 4.3e-22 109.0 141 35.5
MBI16_g16201_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D010670 2.2e-18 96.7 60 73.3
MBI15_g34611_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D010670 1.4e-15 87.4 88 52.3
Lsat_1_v5_gn_2_15720 Lactuca sativa HOM05D001670 ORTHO05D016190 1.8e-15 87.0 83 57.8
Lsat_1_v5_gn_4_47640 Lactuca sativa HOM05D001670 ORTHO05D016190 2.5e-14 83.2 76 56.6
MBI08_g34222_MAGBIO Magnolia biondii HOM05D000942 ORTHO05D010670 4.1e-12 75.9 46 71.7
Lsat_1_v5_gn_1_88920 Lactuca sativa HOM05D000207 ORTHO05D001482 5.9e-11 72.0 67 58.2
Cfa026075 Carpinus fangiana HOM05D001670 ORTHO05D002980 7.7e-11 71.6 100 39.0
Lsat_1_v5_gn_5_41360 Lactuca sativa HOM05D000207 ORTHO05D016190 1.7e-10 70.5 66 60.6
Lj4A515T32 Lonicera japonica HOM05D001670 ORTHO05D002980 3.8e-10 69.3 60 61.7
Lj4P515T29 Lonicera japonica HOM05D001670 ORTHO05D010670 1.1e-09 67.8 40 70.0
Actinidia06366 Actinidia chinensis HOM05D001670 ORTHO05D057084 7.2e-09 65.1 72 50.0
Actinidia32899 Actinidia chinensis HOM05D005596 ORTHO05D006994 7.9e-08 61.6 65 49.2
HanXRQChr16g0519711 Helianthus annuus HOM05D001670 ORTHO05D002980 1.4e-07 60.8 57 45.6
vmacro05063 Vaccinium macrocarpon HOM05D001419 ORTHO05D001376 2.3e-07 60.1 29 96.6
Rhsim07G0176600 Rhododendron simsii HOM05D001419 ORTHO05D001376 1.5e-06 57.4 29 89.7
Actinidia30906 Actinidia chinensis HOM05D001419 ORTHO05D001376 9.7e-06 54.7 29 86.2


User provided reference genes

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