Gene: CSS0045110
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0045110
- Transcript Identifier CSS0045110.1
- Gene Type Coding gene
- Location Chr3 : 152769209-152800782 : positive
Gene Family Information
- ID HOM05D001670
- #Genes/#Species 387/99
- Phylogenetic origin
- ID ORTHO05D002980
- #Genes/#Species 251/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0045110.1
Descriptions
- Description unnamed protein product [Coffea canephora]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006417 | IEA | InterPro | regulation of translation |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G02080 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0030015 | IEA | InterPro | CCR4-NOT core complex | |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G02080 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR032194 | CCR4-NOT transcription complex subunit 1, HEAT repeat |
IPR032193 | CCR4-NOT transcription complex subunit 1, TTP binding domain |
IPR038535 | CCR4-NOT subunit 1, TTP binding domain superfamily |
IPR024557 | CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 |
IPR040398 | CCR4-NOT transcription complex subunit 1 |
IPR007196 | CCR4-Not complex component, Not1, C-terminal |
IPR032191 | CCR4-NOT transcription complex subunit 1, CAF1-binding domain |
IPR016021 | MIF4G-like domain superfamily |
Mapman id | Description |
---|---|
16.4.2.1.2.3 | RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.CCR4-NOT complex.scaffold component NOT1 |