Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 6.8e-156 553.9 270 100.0
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 5.4e-145 517.7 271 93.4
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 9.6e-126 453.8 269 81.8
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 2.1e-125 452.6 271 80.8
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 1.6e-120 436.4 269 80.3
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 6.6e-119 431.0 269 77.7
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 8.7e-119 430.6 269 78.4
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 5.6e-118 427.9 269 78.1
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 8.1e-117 424.1 270 77.8
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 8.1e-117 424.1 269 77.3
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 1.1e-116 423.7 269 76.6
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 5.3e-116 421.4 270 77.4
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 1.5e-115 419.9 269 78.1
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 1.3e-114 416.8 269 75.5
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 1.7e-114 416.4 269 75.8
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 2.9e-114 415.6 270 77.4
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 2.9e-114 415.6 269 76.2
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 1.2e-112 410.2 269 74.7
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 1.3e-111 406.8 269 75.1
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 1.7e-111 406.4 270 74.8
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 8.7e-111 404.1 270 74.4
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 8.7e-111 404.1 270 74.4
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 8.7e-111 404.1 270 74.4
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 8.7e-111 404.1 261 75.5
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 2.5e-110 402.5 266 74.4
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 5.6e-110 401.4 270 74.8
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 9.6e-110 400.6 272 75.7
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.3e-109 400.2 269 73.2
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.6e-109 399.8 269 75.5
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 2.1e-109 399.4 269 73.2
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 2.1e-109 399.4 270 73.7
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 2.8e-109 399.1 270 74.1
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 2.8e-109 399.1 270 74.8
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 4.8e-109 398.3 270 74.1
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 6.2e-109 397.9 256 76.2
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 8.1e-109 397.5 264 76.9
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 1.1e-108 397.1 269 73.2
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 1.1e-108 397.1 269 72.9
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 1.4e-108 396.7 269 73.2
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 1.8e-108 396.4 271 73.8
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 2.4e-108 396.0 269 72.9
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 2.4e-108 396.0 275 70.9
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 2.4e-108 396.0 270 71.9
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 2.4e-108 396.0 269 73.6
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 5.3e-108 394.8 269 73.6
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 9.0e-108 394.0 269 73.6
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 2.0e-107 392.9 269 73.2
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 2.0e-107 392.9 270 74.8
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 2.6e-107 392.5 274 73.0
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 4.5e-107 391.7 272 72.4
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 4.5e-107 391.7 269 72.9
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 9.9e-107 390.6 274 73.7
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 9.9e-107 390.6 249 76.3
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 9.9e-107 390.6 269 72.9
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 1.7e-106 389.8 269 71.7
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 2.2e-106 389.4 272 72.8
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 2.2e-106 389.4 269 72.5
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 4.9e-106 388.3 270 74.1
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 4.9e-106 388.3 270 73.0
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 8.4e-106 387.5 269 72.1
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 1.1e-105 387.1 270 74.4
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 1.4e-105 386.7 270 73.3
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 1.4e-105 386.7 271 71.2
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 3.2e-105 385.6 275 69.8
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 4.2e-105 385.2 274 70.8
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 9.3e-105 384.0 270 70.7
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 1.2e-104 383.6 273 70.3
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 3.5e-104 382.1 276 71.4
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 6.0e-104 381.3 273 71.1
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 1.0e-103 380.6 271 73.8
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 1.8e-103 379.8 258 74.0
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 5.1e-103 378.3 258 73.6
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 2.5e-102 375.9 271 72.7
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 4.3e-102 375.2 272 70.2
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 4.3e-102 375.2 272 70.2
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 9.6e-102 374.0 273 72.5
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 1.6e-101 373.2 269 70.3
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 2.8e-101 372.5 273 70.0
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 4.8e-101 371.7 270 70.7
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 1.1e-100 370.5 220 82.7
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 3.1e-100 369.0 259 72.6
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 3.1e-100 369.0 270 69.6
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 5.3e-100 368.2 277 68.2
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 5.3e-100 368.2 273 70.0
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 9.0e-100 367.5 272 68.4
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 1.2e-99 367.1 259 72.2
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 4.9e-98 361.7 270 70.0
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 2.5e-97 359.4 203 83.3
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 7.1e-97 357.8 270 70.0
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 1.6e-96 356.7 274 67.2
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 1.6e-96 356.7 274 67.2
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 3.0e-95 352.4 273 68.5
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 3.3e-94 349.0 272 65.8
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 4.3e-94 348.6 272 65.4
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 5.7e-94 348.2 272 65.4
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 7.4e-94 347.8 274 66.4
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 6.2e-93 344.7 234 73.9
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 3.1e-92 342.4 229 73.8
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 6.9e-92 341.3 229 73.4
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 9.0e-92 340.9 209 78.0
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 2.0e-91 339.7 280 64.3
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 2.6e-91 339.3 229 73.4
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 1.3e-90 337.0 229 72.9
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 1.6e-88 330.1 266 65.4
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 1.8e-87 326.6 213 73.2
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 8.7e-87 324.3 229 68.6
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 2.8e-85 319.3 264 63.6
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 3.4e-83 312.4 261 64.0
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 4.5e-83 312.0 261 64.4
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 4.2e-81 305.4 207 72.0
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 7.2e-81 304.7 267 62.5
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 2.7e-80 302.8 267 61.4
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 6.7e-71 271.6 274 55.8
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 2.2e-69 266.5 248 59.7
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 6.3e-69 265.0 268 54.5
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 3.2e-65 252.7 269 51.3
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 8.0e-64 248.1 141 80.9
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 5.2e-63 245.4 160 72.5
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 9.4e-49 198.0 201 48.3
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 9.8e-46 188.0 213 48.8
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 1.4e-44 184.1 134 69.4
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 4.9e-29 132.5 170 42.9
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 1.7e-26 124.0 62 90.3
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 1.5e-22 110.9 96 55.2
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 3.1e-15 86.7 46 87.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 2.9e-13 80.1 78 52.6


User provided reference genes

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