Gene: AT4G37510

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G37510
  • Transcript Identifier AT4G37510.1
  • Gene Type Coding gene
  • Location Chr4 : 17626259-17628854 : negative

Gene Family Information

  • ID HOM05D001054
  • #Genes/#Species 576/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G37510.1
  • uniprot Q9SZV0

Descriptions

  • Description Ribonuclease III family protein
  • Computational description Ribonuclease III family protein; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G48121.2); Has 794 Blast hits to 789 proteins in 319 species: Archae - 0; Bacteria - 574; Metazoa - 0; Fungi - 39; Plants - 42; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
ISO
PLAZA Homology (enrichment)protein phosphorylation HOM05D001054
GO:0042254
ISO
PLAZA Integrative Orthologyribosome biogenesis Zm00001eb150280
GO:0000373
ISO
PLAZA Integrative OrthologyGroup II intron splicing Zm00001eb150280
GO:0016075
IEA
Gene OntologyrRNA catabolic process
GO:0016075
IEA
InterProrRNA catabolic process
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IBA
Gene OntologyRNA processing1
GO:0006396
IEA
InterProRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis
GO:0010468
IBA
Gene Ontologyregulation of gene expression1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0004672
ISO
PLAZA Homology (enrichment)protein kinase activity HOM05D001054
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding Zm00001eb150280
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Zm00001eb150280
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D001054
GO:0004525
IEA
GOA Databaseribonuclease III activity
GO:0004525
IBA
Gene Ontologyribonuclease III activity1
GO:0004525
IEA
InterProribonuclease III activity
GO:0003725
IBA
Gene Ontologydouble-stranded RNA binding1
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma Zm00001eb150280
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009536
IEA
GOA Databaseplastid
GO:0005634
IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000999 Ribonuclease III domain
IPR011907 Ribonuclease III
IPR036389 Ribonuclease III, endonuclease domain superfamily
Mapman id Description
16.11.4.1.1.2 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.group-II intron splicing.ribonuclease (RNC1)