Gene: vmacro05388
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro05388
- Transcript Identifier vmacro05388-RA
- Gene Type Coding gene
- Location chr12_Vaccinium_macrocarpon_Stevens_v1 : 26687314-26688123 : positive
Gene Family Information
- ID HOM05D001054
- #Genes/#Species 576/100
- Phylogenetic origin
- ID ORTHO05D007110
- #Genes/#Species 134/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id vmacro05388_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to RNC1: Ribonuclease III domain-containing protein RNC1, chloroplastic (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | IEA | InterPro | RNA processing | |
| GO:0016075 | IEA | InterPro | rRNA catabolic process | |
| GO:0006468 | ISO | PLAZA Homology (enrichment) | protein phosphorylation | HOM05D001054 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004525 | IEA | InterPro | ribonuclease III activity | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0005524 | ISO | PLAZA Homology (enrichment) | ATP binding | HOM05D001054 |
| GO:0004672 | ISO | PLAZA Homology (enrichment) | protein kinase activity | HOM05D001054 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.11.4.1.1.2 | RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.group-II intron splicing.ribonuclease (RNC1) |