Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14571 Utricularia gibba HOM05D006375 ORTHO05D008188 0.0e+00 1567.0 790 100.0
MSTRG.2615 Avicennia marina HOM05D006375 ORTHO05D008188 7.2e-222 774.6 873 53.5
SGA_v2.0_scaffold2G00936 Striga asiatica HOM05D006375 ORTHO05D008188 3.5e-221 772.3 862 53.2
SalBow3G0693 Salvia bowleyana HOM05D006375 ORTHO05D008188 3.7e-218 762.3 864 53.0
Migut.H02262 Erythranthe guttata HOM05D006375 ORTHO05D008188 4.0e-196 689.1 767 53.1
Nitab4.5_0010112g0040 Nicotiana tabacum HOM05D006375 ORTHO05D008188 8.2e-194 681.4 850 49.6
Lj4C263T11 Lonicera japonica HOM05D006375 ORTHO05D008188 1.4e-193 680.6 882 48.4
CSS0034734 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 5.3e-193 678.7 877 48.1
Thecc.04G114800 Theobroma cacao HOM05D006375 ORTHO05D008188 4.5e-192 675.6 894 46.6
Nitab4.5_0000201g0170 Nicotiana tabacum HOM05D006375 ORTHO05D008188 3.2e-190 669.5 847 49.4
Cfa007814 Carpinus fangiana HOM05D006375 ORTHO05D008188 5.5e-190 668.7 875 47.2
EL10Ac6g15274 Beta vulgaris HOM05D006375 ORTHO05D008188 2.1e-189 666.8 877 46.9
Rhsim10G0177200 Rhododendron simsii HOM05D006375 ORTHO05D008188 4.7e-189 665.6 884 46.6
Potri.004G087400 Populus trichocarpa HOM05D006375 ORTHO05D008188 1.0e-188 664.5 869 47.9
Gohir.A07G078100 Gossypium hirsutum HOM05D006375 ORTHO05D008188 1.4e-188 664.1 869 47.3
QL93p0100_0515 Quercus lobata HOM05D006375 ORTHO05D008188 1.4e-188 664.1 870 47.5
Hma1.2p1_0158F.1_g070200 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 1.8e-188 663.7 859 47.5
QL02p058134 Quercus lobata HOM05D006375 ORTHO05D008188 4.0e-188 662.5 870 47.4
ECA238G1164 Erigeron canadensis HOM05D006375 ORTHO05D008188 1.2e-187 661.0 849 48.3
Ciclev10010990m.g Citrus clementina HOM05D006375 ORTHO05D008188 1.5e-187 660.6 870 47.4
PGSC0003DMG400015671 Solanum tuberosum HOM05D006375 ORTHO05D008188 1.5e-187 660.6 848 48.1
Hund04476 Selenicereus undatus HOM05D006375 ORTHO05D008188 2.6e-187 659.8 883 46.1
Solyc11g011150.2 Solanum lycopersicum HOM05D006375 ORTHO05D008188 3.4e-187 659.4 848 48.2
Sc14g0006560 Simmondsia chinensis HOM05D006375 ORTHO05D008188 3.7e-186 656.0 886 46.7
Sopen11g005910 Solanum pennellii HOM05D006375 ORTHO05D008188 1.4e-185 654.1 848 48.0
HanXRQChr14g0444701 Helianthus annuus HOM05D006375 ORTHO05D008188 2.0e-184 650.2 848 47.4
Nn3g18305 Nelumbo nucifera HOM05D006375 ORTHO05D008188 2.7e-184 649.8 864 46.3
Actinidia06495 Actinidia chinensis HOM05D006375 ORTHO05D008188 3.5e-184 649.4 882 46.9
Haze_14261 Corylus avellana HOM05D006375 ORTHO05D008188 4.5e-184 649.0 930 45.3
TAR374G0480 Trochodendron aralioides HOM05D006375 ORTHO05D008188 4.5e-184 649.0 884 46.7
CSS0009955 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 1.3e-183 647.5 717 52.6
Gorai.001G088500 Gossypium raimondii HOM05D006375 ORTHO05D008188 1.7e-183 647.1 870 46.6
Manes.01G118300 Manihot esculenta HOM05D006375 ORTHO05D008188 3.8e-183 646.0 868 47.4
Gohir.D07G082900 Gossypium hirsutum HOM05D006375 ORTHO05D008188 2.5e-182 643.3 870 46.4
Cpa.g.sc116.55 Carica papaya HOM05D006375 ORTHO05D008188 4.0e-180 636.0 700 52.7
CANSAT64G0280 Cannabis sativa HOM05D006375 ORTHO05D008188 1.2e-179 634.4 875 45.3
DCAR_003431 Daucus carota HOM05D006375 ORTHO05D008188 1.2e-179 634.4 858 46.2
CAN.G222.25 Capsicum annuum HOM05D006375 ORTHO05D008188 3.4e-179 632.9 799 48.8
Ah.02g121850 Amaranthus hybridus HOM05D006375 ORTHO05D008188 9.8e-179 631.3 868 46.3
AUR62003604 Chenopodium quinoa HOM05D006375 ORTHO05D008188 8.3e-178 628.2 882 44.2
LjContig00141g0022245 Lotus japonicus HOM05D006375 ORTHO05D008188 8.3e-178 628.2 861 46.3
Sabra04G0058300 Salix brachista HOM05D006375 ORTHO05D008188 1.1e-177 627.9 862 46.8
Peaxi162Scf00305g00616 Petunia axillaris HOM05D006375 ORTHO05D008188 1.6e-176 624.0 676 53.7
Atru.chr1.1908 Acer truncatum HOM05D006375 ORTHO05D008188 1.7e-175 620.5 867 44.9
Glyma.14G214000 Glycine max HOM05D006375 ORTHO05D008188 5.0e-175 619.0 859 44.9
PSO478G2715 Papaver somniferum HOM05D006375 ORTHO05D008188 6.6e-175 618.6 892 45.2
arahy.Tifrunner.gnm1.ann1.WVM8AG Arachis hypogaea HOM05D006375 ORTHO05D008188 1.1e-174 617.8 861 44.7
Cc07_g13460 Coffea canephora HOM05D006375 ORTHO05D008188 1.5e-174 617.5 853 46.5
Aqoxy3G00081 Aquilegia oxysepala HOM05D006375 ORTHO05D008188 3.3e-174 616.3 843 45.7
arahy.Tifrunner.gnm1.ann1.EH3TRU Arachis hypogaea HOM05D006375 ORTHO05D008188 3.6e-173 612.8 875 44.8
Sed0006511 Sechium edule HOM05D006375 ORTHO05D008188 6.1e-173 612.1 876 44.5
THA.LOC104827188 Tarenaya hassleriana HOM05D006375 ORTHO05D008188 4.0e-172 609.4 864 44.8
PSO017G5819 Papaver somniferum HOM05D006375 ORTHO05D008188 5.2e-172 609.0 895 44.1
AUR62017915 Chenopodium quinoa HOM05D006375 ORTHO05D008188 6.8e-172 608.6 853 44.7
PGR004G2253 Punica granatum HOM05D006375 ORTHO05D008188 8.9e-172 608.2 844 44.1
TPR.G8261 Trifolium pratense HOM05D006375 ORTHO05D008188 8.9e-172 608.2 851 44.2
CsaV3_5G024160 Cucumis sativus L. HOM05D006375 ORTHO05D008188 3.4e-171 606.3 871 44.4
Lalb_Chr04g0251361 Lupinus albus HOM05D006375 ORTHO05D008188 3.4e-171 606.3 862 45.0
COL.COLO4_05994 Corchorus olitorius HOM05D006375 ORTHO05D008188 5.7e-171 605.5 861 45.3
Prupe.3G161000 Prunus persica HOM05D006375 ORTHO05D008188 5.4e-169 599.0 823 44.8
TWI53G2003 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 1.6e-168 597.4 864 43.5
VMungo0647G2002 Vigna mungo HOM05D006375 ORTHO05D008188 2.7e-168 596.7 857 43.9
MD17G1258300 Malus domestica HOM05D006375 ORTHO05D008188 4.6e-168 595.9 847 44.9
ATR0564G422 Amborella trichopoda HOM05D006375 ORTHO05D008188 5.9e-168 595.5 891 45.1
Medtr5g078360 Medicago truncatula HOM05D006375 ORTHO05D008188 1.3e-167 594.3 849 44.6
GSVIVG01030782001 Vitis vinifera HOM05D006375 ORTHO05D008188 1.7e-167 594.0 846 44.1
Carub.0006s1484 Capsella rubella HOM05D006375 ORTHO05D008188 3.3e-166 589.7 853 44.0
MELO3C022863.2 Cucumis melo HOM05D006375 ORTHO05D008188 4.3e-166 589.3 895 43.0
RcHm_v2.0_Chr3g0493161 Rosa chinensis HOM05D006375 ORTHO05D008188 5.6e-166 589.0 877 44.1
vmacro07694 Vaccinium macrocarpon HOM05D006375 ORTHO05D008188 5.8e-163 578.9 894 43.1
AL6G27600 Arabidopsis lyrata HOM05D006375 ORTHO05D008188 2.2e-162 577.0 855 44.0
AT5G16630 Arabidopsis thaliana HOM05D006375 ORTHO05D008188 2.9e-162 576.6 855 44.0
TWI74G0084 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 6.4e-162 575.5 866 42.8
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 1.4e-161 574.3 864 43.1
FvH4_1g28770 Fragaria vesca HOM05D006375 ORTHO05D008188 2.4e-161 573.5 857 43.2
Hma1.2p1_0158F.1_g070190 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 1.6e-160 570.9 745 46.7
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 4.6e-160 569.3 856 43.2
Aa31LG11G13020 Aethionema arabicum HOM05D006375 ORTHO05D008188 1.3e-159 567.8 782 45.9
CiPaw.03G071800 Carya illinoinensis HOM05D006375 ORTHO05D008188 1.3e-159 567.8 868 43.5
Psat2g047400 Pisum sativum HOM05D006375 ORTHO05D008188 1.7e-159 567.4 850 42.7
Phvul.008G233100 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 8.6e-159 565.1 851 42.4
Thhalv10012651m.g Eutrema salsugineum HOM05D006375 ORTHO05D008188 1.5e-158 564.3 850 43.1
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 1.9e-158 563.9 856 42.4
BraA02t05338Z Brassica rapa HOM05D006375 ORTHO05D008188 3.3e-158 563.1 856 43.0
FAN19G0463 Fragaria x ananassa HOM05D006375 ORTHO05D008188 2.1e-157 560.5 868 42.4
CARHR196570 Cardamine hirsuta HOM05D006375 ORTHO05D008188 2.3e-156 557.0 851 43.8
ClCG01G008800 Citrullus lanatus HOM05D006375 ORTHO05D008188 4.0e-156 556.2 867 42.9
FAN23G0218 Fragaria x ananassa HOM05D006375 ORTHO05D008188 4.0e-156 556.2 891 41.5
MBI19_g34823_MAGBIO Magnolia biondii HOM05D006375 ORTHO05D008188 7.5e-155 552.0 598 52.5
Lsat_1_v5_gn_2_69340 Lactuca sativa HOM05D006375 ORTHO05D008188 2.2e-154 550.4 828 44.6
Eucgr.F02852 Eucalyptus grandis HOM05D006375 ORTHO05D008188 8.3e-154 548.5 584 52.2
Phvul.010G024866 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 1.4e-153 547.7 696 46.4
CDE05G1980 Ceratophyllum demersum HOM05D006375 ORTHO05D008188 4.1e-153 546.2 834 43.4
Sp6g27540 Schrenkiella parvula HOM05D006375 ORTHO05D008188 4.3e-150 536.2 867 41.4
HPP92_024778 Vanilla planifolia HOM05D006375 ORTHO05D008188 2.1e-149 533.9 862 40.5
SHI25352 Sapria himalayana HOM05D006375 ORTHO05D008188 8.1e-149 531.9 575 52.7
BolC2t06767H Brassica oleracea HOM05D006375 ORTHO05D000255 1.8e-148 530.8 896 40.4
Os08g0427500 Oryza sativa ssp. japonica HOM05D006375 ORTHO05D008188 1.3e-143 514.6 855 40.4
Zm00001eb041880 Zea mays HOM05D006375 ORTHO05D008188 4.3e-142 509.6 838 40.3
SEGI_37856 Sequoiadendron giganteum HOM05D006375 ORTHO05D008188 1.5e-131 474.6 954 37.2
Dinv28205 Davidia involucrata HOM05D006375 ORTHO05D008188 1.5e-126 458.0 717 42.7
SMO139G0070 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 1.3e-125 454.9 746 39.1
SMO157G0011 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 1.8e-124 451.1 754 38.9
Pp3c22_7360 Physcomitrium patens HOM05D006375 ORTHO05D008188 6.4e-122 442.6 933 35.5
Mapoly0069s0010 Marchantia polymorpha HOM05D006375 ORTHO05D008188 6.7e-111 406.0 810 37.8
AagrBONN_evm.TU.Sc2ySwM_340.97 Anthoceros agrestis HOM05D006375 ORTHO05D008188 2.6e-107 394.0 753 37.5
FAN26G3226 Fragaria x ananassa HOM05D006375 ORTHO05D008188 6.3e-101 372.9 475 45.9
CBR_g3816 Chara braunii HOM05D006375 ORTHO05D008188 5.7e-86 323.2 694 33.3
Ca_22495_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 7.4e-86 322.8 276 58.3
PRCOL_00001710 Prasinoderma coloniale HOM05D006375 ORTHO05D008188 1.9e-57 228.4 541 33.3
Ca_22493_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 2.6e-46 191.4 282 42.9
Haze_27154 Corylus avellana HOM05D006375 ORTHO05D008188 2.4e-44 184.9 397 32.5
MCO12G035 Micromonas commoda HOM05D006375 ORTHO05D008188 2.4e-44 184.9 402 33.1
Cre12.g557400 Chlamydomonas reinhardtii HOM05D006375 ORTHO05D008188 1.2e-30 139.4 319 32.6
Nn2g13217 Nelumbo nucifera HOM05D006375 ORTHO05D008188 2.3e-26 125.2 156 45.5
Cfa025272 Carpinus fangiana HOM05D006375 ORTHO05D008188 1.1e-23 116.3 433 24.9
Cfa024716 Carpinus fangiana HOM05D006375 ORTHO05D008188 8.4e-21 106.7 434 25.8


User provided reference genes

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