Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 0.0e+00 1374.8 721 100.0
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 1.2e-289 999.6 732 71.6
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 1.6e-284 982.6 660 76.2
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 7.1e-277 957.2 697 71.4
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 1.7e-275 952.6 665 73.8
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 5.6e-274 947.6 663 73.5
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 3.6e-273 944.9 729 68.6
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 1.8e-272 942.6 725 67.6
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 1.2e-271 939.9 669 73.1
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 2.4e-269 932.2 724 67.1
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 4.2e-269 931.4 722 68.8
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 1.2e-268 929.9 727 67.3
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 6.0e-268 927.5 678 72.6
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 5.1e-267 924.5 728 67.7
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 1.5e-266 922.9 652 72.5
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 3.3e-266 921.8 727 67.8
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 1.3e-265 919.8 731 67.2
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 1.6e-265 919.5 729 70.5
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 3.7e-265 918.3 728 69.0
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 4.8e-265 917.9 625 74.6
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 1.1e-264 916.8 625 74.4
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 7.6e-263 910.6 662 71.9
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 2.5e-261 905.6 779 62.6
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 1.6e-260 902.9 729 65.7
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 1.6e-260 902.9 723 66.7
Sp6g16300 Schrenkiella parvula HOM05D005363 ORTHO05D006607 3.5e-260 901.7 637 72.4
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 7.9e-260 900.6 660 70.9
CARHR267540 Cardamine hirsuta HOM05D005363 ORTHO05D006607 3.0e-259 898.7 722 67.7
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 5.1e-259 897.9 665 68.9
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 1.1e-258 896.7 725 65.9
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 2.5e-258 895.6 729 65.0
Thhalv10012804m.g Eutrema salsugineum HOM05D005363 ORTHO05D006607 4.3e-258 894.8 643 71.7
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 9.6e-258 893.6 622 73.3
AT5G54260 Arabidopsis thaliana HOM05D005363 ORTHO05D006607 3.7e-257 891.7 641 71.9
PSO210G7030 Papaver somniferum HOM05D005363 ORTHO05D006607 1.8e-256 889.4 725 66.2
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 4.1e-256 888.3 729 66.0
PSO832G2870 Papaver somniferum HOM05D005363 ORTHO05D006607 5.3e-256 887.9 724 66.2
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 1.2e-255 886.7 722 65.8
BcaC04g20356 Brassica carinata HOM05D005363 ORTHO05D006607 4.5e-255 884.8 631 71.9
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 5.8e-255 884.4 727 64.8
Aqoxy1G03881 Aquilegia oxysepala HOM05D005363 ORTHO05D006607 1.0e-254 883.6 728 65.8
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 2.9e-254 882.1 707 65.6
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 2.9e-254 882.1 717 65.4
BcaB08g35781 Brassica carinata HOM05D005363 ORTHO05D006607 5.0e-254 881.3 635 71.7
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 5.0e-254 881.3 726 65.0
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 5.0e-254 881.3 655 70.4
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 8.4e-254 880.6 657 70.0
Medtr2g081100 Medicago truncatula HOM05D005363 ORTHO05D006607 1.4e-253 879.8 658 69.3
Carub.0008s1460 Capsella rubella HOM05D005363 ORTHO05D006607 2.5e-253 879.0 608 73.7
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 4.2e-253 878.2 726 64.7
HPP92_026561 Vanilla planifolia HOM05D005363 ORTHO05D006607 7.2e-253 877.5 665 66.9
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 9.3e-253 877.1 723 65.4
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 2.1e-252 875.9 663 69.4
TPR.G32857 Trifolium pratense HOM05D005363 ORTHO05D006607 3.5e-252 875.2 618 71.8
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 4.6e-252 874.8 656 68.9
Sopen09g004090 Solanum pennellii HOM05D005363 ORTHO05D006607 1.0e-251 873.6 569 76.1
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 3.9e-251 871.7 725 64.6
ClCG11G018480 Citrullus lanatus HOM05D005363 ORTHO05D006607 8.7e-251 870.5 706 65.3
BolC9t57330H Brassica oleracea HOM05D005363 ORTHO05D006607 1.9e-250 869.4 640 70.5
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 2.5e-250 869.0 719 64.7
BraA10t43250Z Brassica rapa HOM05D005363 ORTHO05D006607 3.3e-250 868.6 646 70.3
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 3.3e-250 868.6 725 64.1
THA.LOC104813315 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 3.3e-250 868.6 502 82.9
Aa31LG3G10220 Aethionema arabicum HOM05D005363 ORTHO05D006607 7.4e-250 867.5 722 64.1
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 9.7e-250 867.1 719 64.5
HPP92_026534 Vanilla planifolia HOM05D005363 ORTHO05D006607 1.8e-248 862.8 731 62.5
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 4.1e-248 861.7 721 64.2
RhsimUnG0258300 Rhododendron simsii HOM05D005363 ORTHO05D006607 1.2e-247 860.1 650 67.7
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 1.5e-247 859.8 692 66.0
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 2.6e-247 859.0 711 64.8
Cc06_g05460 Coffea canephora HOM05D005363 ORTHO05D006607 4.5e-247 858.2 494 83.8
C09p44570 Brassica napus HOM05D005363 ORTHO05D006607 7.7e-247 857.4 650 69.2
ATR0693G020 Amborella trichopoda HOM05D005363 ORTHO05D006607 1.3e-246 856.7 721 62.4
Zm00001eb069270 Zea mays HOM05D005363 ORTHO05D006607 5.0e-246 854.7 667 66.6
A10p11550 Brassica napus HOM05D005363 ORTHO05D006607 8.5e-246 854.0 652 68.9
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 1.6e-244 849.7 713 66.6
Os04g0635900 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 1.6e-244 849.7 670 65.1
FvH4_3g21040 Fragaria vesca HOM05D005363 ORTHO05D006607 2.1e-244 849.4 644 68.9
FAN11G3021 Fragaria x ananassa HOM05D005363 ORTHO05D006607 2.1e-244 849.4 644 68.9
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 2.1e-244 849.4 654 67.3
SHI33827 Sapria himalayana HOM05D005363 ORTHO05D006607 3.6e-244 848.6 734 61.0
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 5.7e-242 841.3 621 71.0
FAN25G3415 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.3e-241 840.1 650 68.6
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 4.1e-240 835.1 745 62.0
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 2.0e-239 832.8 619 72.1
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 3.4e-239 832.0 666 67.1
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 5.0e-238 828.2 718 63.5
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 5.0e-238 828.2 641 65.8
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 1.1e-232 810.4 474 81.4
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.0e-230 803.9 636 67.8
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 5.7e-226 788.1 730 61.0
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 2.2e-222 776.2 716 60.3
AUR62029306 Chenopodium quinoa HOM05D005363 ORTHO05D006607 5.2e-219 765.0 799 54.2
AUR62015595 Chenopodium quinoa HOM05D005363 ORTHO05D006607 1.5e-218 763.5 519 72.6
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 2.9e-214 749.2 526 73.4
Pp3c24_2350 Physcomitrium patens HOM05D005363 ORTHO05D006607 4.7e-212 741.9 500 70.4
Mapoly0023s0117 Marchantia polymorpha HOM05D005363 ORTHO05D006607 1.6e-207 726.9 684 55.8
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis HOM05D005363 ORTHO05D006607 1.5e-205 720.3 734 56.1
SMO347G0170 Selaginella moellendorffii HOM05D005363 ORTHO05D006607 8.3e-201 704.5 498 68.1
FAN16G0276 Fragaria x ananassa HOM05D005363 ORTHO05D006607 3.3e-197 692.6 613 62.2
CDE12G0672 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 6.4e-185 651.7 393 77.9
unitig_13.g31430 Utricularia gibba HOM05D005363 ORTHO05D006607 3.5e-175 619.4 555 64.5
CBR_g48040 Chara braunii HOM05D005363 ORTHO05D006607 1.7e-174 617.1 538 56.3
Atru.chr2.2913 Acer truncatum HOM05D005363 ORTHO05D006607 9.6e-173 611.3 331 85.5
Zm00001eb171920 Zea mays HOM05D005363 ORTHO05D006607 8.9e-171 604.7 467 61.5
Os08g0177600 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 1.6e-167 594.0 468 61.1
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 3.6e-164 582.8 680 53.5
Ca_01813_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 1.5e-154 550.8 360 72.5
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 2.3e-142 510.4 490 60.6
Eucgr.F01076 Eucalyptus grandis HOM05D005363 ORTHO05D006607 4.1e-139 499.6 561 55.8
Cre12.g556911 Chlamydomonas reinhardtii HOM05D005363 ORTHO05D006607 5.3e-131 472.6 507 48.7
MCO13G379 Micromonas commoda HOM05D005363 ORTHO05D006607 4.5e-122 443.0 563 44.4
SEGI_22122 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 7.2e-112 409.1 251 74.5
PRCOL_00003292 Prasinoderma coloniale HOM05D005363 ORTHO05D006607 3.8e-105 386.7 539 41.6
Cfa025591 Carpinus fangiana HOM05D005363 ORTHO05D006607 4.0e-102 376.7 511 39.3
Nitab4.5_0007366g0060 Nicotiana tabacum HOM05D005363 ORTHO05D006607 2.8e-95 354.0 214 78.5
PGSC0003DMG400002669 Solanum tuberosum HOM05D005363 ORTHO05D006607 4.0e-86 323.6 176 85.2
CAN.G397.4 Capsicum annuum HOM05D005363 ORTHO05D006607 8.0e-79 299.3 263 59.3
Atru.chr2.2912 Acer truncatum HOM05D005363 ORTHO05D006607 5.8e-77 293.1 328 57.6
MBI09_g27609_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 1.9e-64 251.5 160 69.4
CDE12G0057 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 9.0e-54 216.1 172 61.0
Eucgr.C01186 Eucalyptus grandis HOM05D005363 ORTHO05D006607 8.1e-47 193.0 375 42.7
CDE12G0487 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 1.2e-45 189.1 317 39.7
SEGI_32923 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 1.6e-39 168.7 95 83.2
Ca_01800_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 3.3e-32 144.4 241 45.6
Ca_30473_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 1.3e-31 142.5 229 46.7
GSVIVG01001519001 Vitis vinifera HOM05D005363 ORTHO05D006607 3.8e-28 131.0 95 72.6
SEGI_35588 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 4.6e-26 124.0 303 39.3
CDE12G0011 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 5.3e-22 110.5 76 80.3
arahy.Tifrunner.gnm1.ann1.Q8WXS4 Arachis hypogaea HOM05D005363 ORTHO05D006607 3.1e-14 84.7 93 50.5
Cc06_g05450 Coffea canephora HOM05D005363 ORTHO05D006607 4.8e-07 60.8 164 37.8
Sopen00g013530 Solanum pennellii HOM05D005363 ORTHO05D006607 6.3e-07 60.5 94 48.9


User provided reference genes

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