Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3264 Utricularia gibba HOM05D001377 ORTHO05D001221 1.6e-222 775.8 395 100.0
MSTRG.810 Avicennia marina HOM05D001377 ORTHO05D001221 1.8e-40 171.0 449 32.3
SalBow8G4999 Salvia bowleyana HOM05D001377 ORTHO05D001221 9.0e-40 168.7 457 33.3
Migut.L01107 Erythranthe guttata HOM05D001377 ORTHO05D001221 8.4e-38 162.2 431 33.6
Oeu041875.1 Olea europaea HOM05D001377 ORTHO05D001221 1.4e-29 134.8 440 30.9
SGA_v2.0_scaffold36G14511 Striga asiatica HOM05D001377 ORTHO05D001221 2.7e-28 130.6 320 36.6
Nitab4.5_0003990g0020 Nicotiana tabacum HOM05D001377 ORTHO05D001221 2.6e-23 114.0 461 28.6
Dinv16523 Davidia involucrata HOM05D001377 ORTHO05D001221 1.1e-21 108.6 509 28.3
Nitab4.5_0000597g0010 Nicotiana tabacum HOM05D001377 ORTHO05D001221 9.3e-21 105.5 456 29.2
Sed0017705 Sechium edule HOM05D001377 ORTHO05D001221 5.1e-19 99.8 464 25.4
TWI53G1363 Tripterygium wilfordii HOM05D001377 ORTHO05D001221 6.7e-19 99.4 456 27.6
Rhsim12G0080700 Rhododendron simsii HOM05D001377 ORTHO05D001221 2.5e-18 97.4 384 27.9
Cfa007959 Carpinus fangiana HOM05D001377 ORTHO05D001221 4.3e-18 96.7 504 27.6
VMungo1383G0213 Vigna mungo HOM05D001377 ORTHO05D001221 4.3e-18 96.7 495 26.3
ClCG01G005770 Citrullus lanatus HOM05D001377 ORTHO05D001221 7.4e-18 95.9 463 26.6
Glyma.18G280500 Glycine max HOM05D001377 ORTHO05D001221 9.7e-18 95.5 508 27.4
Phvul.008G020600 Phaseolus vulgaris HOM05D001377 ORTHO05D001221 9.7e-18 95.5 493 27.0
CiPaw.04G003600 Carya illinoinensis HOM05D001377 ORTHO05D001221 1.6e-17 94.7 502 28.5
Glyma.08G256300 Glycine max HOM05D001377 ORTHO05D001221 3.7e-17 93.6 502 27.3
PGR042G1271 Punica granatum HOM05D001377 ORTHO05D001221 1.4e-16 91.7 472 27.5
vmacro01359 Vaccinium macrocarpon HOM05D001377 ORTHO05D001221 1.4e-16 91.7 438 26.3
CiPaw.03G005400 Carya illinoinensis HOM05D001377 ORTHO05D001221 2.4e-16 90.9 510 27.6
Prupe.3G240800 Prunus persica HOM05D001377 ORTHO05D001221 6.9e-16 89.4 495 26.9
Thecc.02G363000 Theobroma cacao HOM05D001377 ORTHO05D001221 1.5e-15 88.2 474 24.7
Duzib251G0529 Durio zibethinus HOM05D001377 ORTHO05D001221 7.7e-15 85.9 472 25.0
Ciclev10030538m.g Citrus clementina HOM05D001377 ORTHO05D001221 1.7e-14 84.7 492 26.2
TAR371G0717 Trochodendron aralioides HOM05D001377 ORTHO05D001221 2.9e-14 84.0 514 26.5
QL01p000954 Quercus lobata HOM05D001377 ORTHO05D001221 5.0e-14 83.2 486 24.7
TWI74G0426 Tripterygium wilfordii HOM05D001377 ORTHO05D001221 1.1e-13 82.0 492 25.0
Ciclev10013467m.g Citrus clementina HOM05D001377 ORTHO05D001221 1.4e-13 81.6 483 25.1
Ca_26150_v3 Cicer arietinum L. HOM05D001377 ORTHO05D001221 2.5e-13 80.9 498 25.9
CDE06G2647 Ceratophyllum demersum HOM05D001377 ORTHO05D001221 7.2e-13 79.3 479 24.8
COL.COLO4_16205 Corchorus olitorius HOM05D001377 ORTHO05D001221 9.4e-13 79.0 487 26.3
Lj6C767T7 Lonicera japonica HOM05D001377 ORTHO05D001221 2.7e-12 77.4 324 28.4
MELO3C005352.2 Cucumis melo HOM05D001377 ORTHO05D001221 1.0e-11 75.5 465 23.9
FAN02G0241 Fragaria x ananassa HOM05D001377 ORTHO05D001221 1.0e-11 75.5 468 25.9
Migut.H00533 Erythranthe guttata HOM05D001377 ORTHO05D001221 1.4e-11 75.1 469 27.1
Potri.008G114800 Populus trichocarpa HOM05D001377 ORTHO05D001221 1.4e-11 75.1 496 24.4
BolC6t39131H Brassica oleracea HOM05D001377 ORTHO05D001221 1.8e-11 74.7 434 26.5
Hma1.2p1_0136F.1_g062050 Hydrangea macrophylla HOM05D001377 ORTHO05D001221 1.8e-11 74.7 432 26.6
FAN09G4253 Fragaria x ananassa HOM05D001377 ORTHO05D001221 2.3e-11 74.3 475 26.3
QL02p053039 Quercus lobata HOM05D001377 ORTHO05D001221 2.3e-11 74.3 497 25.8
Atru.chr8.798 Acer truncatum HOM05D001377 ORTHO05D001221 3.0e-11 73.9 494 26.3
TAR629G0360 Trochodendron aralioides HOM05D001377 ORTHO05D001221 3.0e-11 73.9 499 25.7
Hma1.2p1_0605F.1_g187860 Hydrangea macrophylla HOM05D001377 ORTHO05D001221 3.9e-11 73.6 445 24.7
Lj1g0026501 Lotus japonicus HOM05D001377 ORTHO05D001221 3.9e-11 73.6 486 26.5
CsaV3_5G028920 Cucumis sativus L. HOM05D001377 ORTHO05D001221 5.1e-11 73.2 464 24.8
FAN14G3399 Fragaria x ananassa HOM05D001377 ORTHO05D001221 5.1e-11 73.2 476 25.2
PGSC0003DMG400003363 Solanum tuberosum HOM05D001377 ORTHO05D001221 5.1e-11 73.2 485 24.7
A07p33840 Brassica napus HOM05D001377 ORTHO05D001221 8.8e-11 72.4 433 26.1
BraA07t31010Z Brassica rapa HOM05D001377 ORTHO05D001221 8.8e-11 72.4 431 26.9
Lalb_Chr17g0336541 Lupinus albus HOM05D001377 ORTHO05D001221 8.8e-11 72.4 501 25.0
Manes.01G107600 Manihot esculenta HOM05D001377 ORTHO05D001221 8.8e-11 72.4 469 25.4
AT1G67230 Arabidopsis thaliana HOM05D001377 ORTHO05D001221 1.1e-10 72.0 468 27.4
BcaC08g46149 Brassica carinata HOM05D001377 ORTHO05D001221 1.1e-10 72.0 434 26.7
C06p43050 Brassica napus HOM05D001377 ORTHO05D001221 1.1e-10 72.0 434 26.7
Medtr7g018610 Medicago truncatula HOM05D001377 ORTHO05D001221 1.1e-10 72.0 508 25.0
AL2G25750 Arabidopsis lyrata HOM05D001377 ORTHO05D001221 1.5e-10 71.6 465 26.9
Ah.16g102090 Amaranthus hybridus HOM05D001377 ORTHO05D001221 2.0e-10 71.2 476 26.5
Cc11_g10760 Coffea canephora HOM05D001377 ORTHO05D001221 2.0e-10 71.2 405 25.7
BcaB03g15212 Brassica carinata HOM05D001377 ORTHO05D001221 2.5e-10 70.9 436 24.8
ClCG11G005290 Citrullus lanatus HOM05D001377 ORTHO05D001221 2.5e-10 70.9 507 24.3
Thhalv10018034m.g Eutrema salsugineum HOM05D001377 ORTHO05D001221 2.5e-10 70.9 458 25.5
Peaxi162Scf00004g10118 Petunia axillaris HOM05D001377 ORTHO05D001221 2.5e-10 70.9 322 27.0
GSVIVG01011972001 Vitis vinifera HOM05D001377 ORTHO05D001221 4.3e-10 70.1 428 24.1
CDE07G1824 Ceratophyllum demersum HOM05D001377 ORTHO05D001221 5.7e-10 69.7 447 25.3
FvH4_4g28241 Fragaria vesca HOM05D001377 ORTHO05D001221 5.7e-10 69.7 446 24.2
RcHm_v2.0_Chr2g0163401 Rosa chinensis HOM05D001377 ORTHO05D001221 7.4e-10 69.3 496 24.8
Haze_14110 Corylus avellana HOM05D001377 ORTHO05D001221 1.3e-09 68.6 349 27.2
FAN12G3823 Fragaria x ananassa HOM05D001377 ORTHO05D001221 1.7e-09 68.2 446 24.0
VMungo1215G1277 Vigna mungo HOM05D001377 ORTHO05D001221 2.2e-09 67.8 342 25.1
Peaxi162Scf01056g00241 Petunia axillaris HOM05D001377 ORTHO05D001221 2.8e-09 67.4 477 25.6
Eucgr.J01462 Eucalyptus grandis HOM05D001377 ORTHO05D001221 3.7e-09 67.0 262 29.0
DCAR_030093 Daucus carota HOM05D001377 ORTHO05D001221 4.8e-09 66.6 453 24.7
FAN07G2260 Fragaria x ananassa HOM05D001377 ORTHO05D001221 6.3e-09 66.2 446 25.3
Haze_14112 Corylus avellana HOM05D001377 ORTHO05D001221 8.2e-09 65.9 349 26.9
DCAR_007220 Daucus carota HOM05D001377 ORTHO05D001221 8.2e-09 65.9 338 26.9
FvH4_6g45461 Fragaria vesca HOM05D001377 ORTHO05D001221 8.2e-09 65.9 329 26.7
HanXRQChr16g0528821 Helianthus annuus HOM05D001377 ORTHO05D001221 8.2e-09 65.9 149 32.2
CANSAT11G1821 Cannabis sativa HOM05D001377 ORTHO05D001221 1.1e-08 65.5 486 24.1
Manes.06G074000 Manihot esculenta HOM05D001377 ORTHO05D001221 1.1e-08 65.5 324 27.5
QL01p000944 Quercus lobata HOM05D001377 ORTHO05D001221 1.1e-08 65.5 288 27.8
Rhsim08G0079900 Rhododendron simsii HOM05D001377 ORTHO05D001221 1.1e-08 65.5 453 23.8
Dinv05807 Davidia involucrata HOM05D001377 ORTHO05D001221 1.4e-08 65.1 131 36.6
CiPaw.15G002200 Carya illinoinensis HOM05D001377 ORTHO05D001221 1.8e-08 64.7 492 23.4
Carub.0002s1351 Capsella rubella HOM05D001377 ORTHO05D001221 2.4e-08 64.3 461 24.3
MD13G1048500 Malus domestica HOM05D001377 ORTHO05D001221 2.4e-08 64.3 498 23.9
ECA238G3630 Erigeron canadensis HOM05D001377 ORTHO05D001221 5.3e-08 63.2 448 24.1
Nn3g17678 Nelumbo nucifera HOM05D001377 ORTHO05D001221 5.3e-08 63.2 134 35.1
Solyc03g045050.4 Solanum lycopersicum HOM05D001377 ORTHO05D001221 6.9e-08 62.8 481 23.1
GSVIVG01031076001 Vitis vinifera HOM05D001377 ORTHO05D001221 6.9e-08 62.8 448 25.0
arahy.Tifrunner.gnm1.ann1.EMYT0X Arachis hypogaea HOM05D001377 ORTHO05D001221 9.1e-08 62.4 131 34.4
Cpa.g.sc1.235 Carica papaya HOM05D001377 ORTHO05D001221 1.2e-07 62.0 478 22.4
FAN17G1780 Fragaria x ananassa HOM05D001377 ORTHO05D001221 1.5e-07 61.6 451 24.4
MSTRG.2942 Avicennia marina HOM05D001377 ORTHO05D001221 2.0e-07 61.2 334 25.4
arahy.Tifrunner.gnm1.ann1.XPT71U Arachis hypogaea HOM05D001377 ORTHO05D001221 2.6e-07 60.8 131 34.4
CSS0046282 Camellia sinensis var. sinensis HOM05D001377 ORTHO05D001221 2.6e-07 60.8 156 32.7
Prupe.1G303700 Prunus persica HOM05D001377 ORTHO05D001221 2.6e-07 60.8 342 26.3
Carub.0002s1535 Capsella rubella HOM05D001377 ORTHO05D001221 3.4e-07 60.5 421 22.3
TAR622G0233 Trochodendron aralioides HOM05D001377 ORTHO05D001221 3.4e-07 60.5 129 35.7
MD09G1082900 Malus domestica HOM05D001377 ORTHO05D001221 4.5e-07 60.1 135 34.8
RcHm_v2.0_Chr7g0226101 Rosa chinensis HOM05D001377 ORTHO05D001221 4.5e-07 60.1 448 25.4
Sed0011516 Sechium edule HOM05D001377 ORTHO05D001221 4.5e-07 60.1 495 25.5
Cfa018650 Carpinus fangiana HOM05D001377 ORTHO05D001221 5.9e-07 59.7 289 26.0
Sopen03g009490 Solanum pennellii HOM05D001377 ORTHO05D001221 5.9e-07 59.7 480 22.9
Duzib138G0922 Durio zibethinus HOM05D001377 ORTHO05D001221 7.7e-07 59.3 433 23.6
TWI79G1631 Tripterygium wilfordii HOM05D001377 ORTHO05D001221 7.7e-07 59.3 282 26.2
Sp5g22170 Schrenkiella parvula HOM05D001377 ORTHO05D001221 1.0e-06 58.9 459 24.2
THA.LOC104822178 Tarenaya hassleriana HOM05D001377 ORTHO05D001221 1.3e-06 58.5 428 24.3
Haze_17417 Corylus avellana HOM05D001377 ORTHO05D001221 1.7e-06 58.2 318 25.8
THA.LOC104822710 Tarenaya hassleriana HOM05D001377 ORTHO05D001221 1.7e-06 58.2 455 23.1
Actinidia17618 Actinidia chinensis HOM05D002378 ORTHO05D001221 2.2e-06 57.8 146 27.4
BolC2t08423H Brassica oleracea HOM05D001377 ORTHO05D001221 2.2e-06 57.8 454 24.0
Gohir.D07G179800 Gossypium hirsutum HOM05D001377 ORTHO05D001221 2.2e-06 57.8 129 29.5
Lj7A9G80 Lonicera japonica HOM05D001377 ORTHO05D001221 2.2e-06 57.8 317 28.1
CARHR059690 Cardamine hirsuta HOM05D001377 ORTHO05D001221 2.9e-06 57.4 466 25.5
Gohir.A07G164500 Gossypium hirsutum HOM05D001377 ORTHO05D001221 2.9e-06 57.4 129 29.5
THA.LOC104805555 Tarenaya hassleriana HOM05D001377 ORTHO05D001221 2.9e-06 57.4 459 23.3
Gorai.001G200600 Gossypium raimondii HOM05D001377 ORTHO05D001221 3.8e-06 57.0 129 29.5
CANSAT64G1104 Cannabis sativa HOM05D001377 ORTHO05D001221 5.0e-06 56.6 407 21.9
Eucgr.G02361 Eucalyptus grandis HOM05D001377 ORTHO05D001221 5.0e-06 56.6 129 32.6
PGSC0003DMG402010047 Solanum tuberosum HOM05D001377 ORTHO05D001221 5.0e-06 56.6 470 22.8
C02p22700 Brassica napus HOM05D001377 ORTHO05D001221 8.5e-06 55.8 455 24.4
Psat3g191560 Pisum sativum HOM05D001377 ORTHO05D001221 8.5e-06 55.8 128 32.0
TPR.G4495 Trifolium pratense HOM05D001377 ORTHO05D001221 8.5e-06 55.8 128 32.8


User provided reference genes

Program Settings