Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g13714 Utricularia gibba HOM05D003957 ORTHO05D004833 5.7e-68 260.8 129 100.0
MSTRG.20577 Avicennia marina HOM05D003957 ORTHO05D004833 6.3e-35 151.0 85 83.5
SGA_v2.0_scaffold119G32740 Striga asiatica HOM05D003957 ORTHO05D004833 3.1e-34 148.7 85 82.4
ClCG10G012310 Citrullus lanatus HOM05D003957 ORTHO05D004833 5.4e-34 147.9 105 67.6
MELO3C023982.2 Cucumis melo HOM05D003957 ORTHO05D004833 5.4e-34 147.9 105 67.6
CsaV3_3G032090 Cucumis sativus L. HOM05D003957 ORTHO05D004833 5.4e-34 147.9 105 67.6
CiPaw.13G005800 Carya illinoinensis HOM05D003957 ORTHO05D004833 2.0e-33 146.0 87 74.7
Psat5g208720 Pisum sativum HOM05D003957 ORTHO05D004833 2.7e-33 145.6 85 78.8
TPR.G3690 Trifolium pratense HOM05D003957 ORTHO05D004833 2.7e-33 145.6 84 77.4
Nitab4.5_0008353g0020 Nicotiana tabacum HOM05D003957 ORTHO05D004833 7.7e-33 144.1 85 77.6
Oeu014587.1 Olea europaea HOM05D003957 ORTHO05D004833 7.7e-33 144.1 99 70.7
Migut.B01290 Erythranthe guttata HOM05D003957 ORTHO05D004833 1.0e-32 143.7 85 80.0
Gorai.004G171700 Gossypium raimondii HOM05D003957 ORTHO05D004833 1.0e-32 143.7 110 61.8
Zm00001eb087020 Zea mays HOM05D003957 ORTHO05D004833 1.0e-32 143.7 84 77.4
Cfa010778 Carpinus fangiana HOM05D003957 ORTHO05D004833 1.3e-32 143.3 85 76.5
Lj7A573G28 Lonicera japonica HOM05D003957 ORTHO05D004833 1.3e-32 143.3 85 77.6
Medtr3g030890 Medicago truncatula HOM05D003957 ORTHO05D004833 1.3e-32 143.3 85 77.6
Peaxi162Scf00953g00417 Petunia axillaris HOM05D003957 ORTHO05D004833 1.3e-32 143.3 85 76.5
Phvul.011G009800 Phaseolus vulgaris HOM05D003957 ORTHO05D004833 1.3e-32 143.3 84 77.4
Atru.chr11.2608 Acer truncatum HOM05D003957 ORTHO05D004833 1.7e-32 142.9 85 76.5
arahy.Tifrunner.gnm1.ann1.MG259H Arachis hypogaea HOM05D003957 ORTHO05D004833 1.7e-32 142.9 84 76.2
Cpa.g.sc125.12 Carica papaya HOM05D003957 ORTHO05D004833 1.7e-32 142.9 85 76.5
Sed0012226 Sechium edule HOM05D003957 ORTHO05D004833 1.7e-32 142.9 84 77.4
CANSAT80G0271 Cannabis sativa HOM05D003957 ORTHO05D004833 2.3e-32 142.5 85 77.6
DCAR_003217 Daucus carota HOM05D003957 ORTHO05D004833 2.3e-32 142.5 85 77.6
TPR.G35301 Trifolium pratense HOM05D003957 ORTHO05D004833 2.3e-32 142.5 84 77.4
CAN.G219.37 Capsicum annuum HOM05D003957 ORTHO05D004833 2.9e-32 142.1 85 77.6
Duzib138G0145 Durio zibethinus HOM05D003957 ORTHO05D004833 2.9e-32 142.1 85 76.5
ATR0332G004 Amborella trichopoda HOM05D003957 ORTHO05D004833 3.8e-32 141.7 84 76.2
Glyma.08G090300 Glycine max HOM05D003957 ORTHO05D004833 3.8e-32 141.7 84 76.2
SalBow5G1725 Salvia bowleyana HOM05D003957 ORTHO05D004833 3.8e-32 141.7 85 77.6
SalBow5G3453 Salvia bowleyana HOM05D003957 ORTHO05D004833 3.8e-32 141.7 85 77.6
Sed0014830 Sechium edule HOM05D003957 ORTHO05D004833 3.8e-32 141.7 84 77.4
VMungo1127G1153 Vigna mungo HOM05D003957 ORTHO05D004833 3.8e-32 141.7 84 76.2
Carub.0008s0751 Capsella rubella HOM05D003957 ORTHO05D004833 5.0e-32 141.4 85 77.6
Phvul.005G024600 Phaseolus vulgaris HOM05D003957 ORTHO05D004833 5.0e-32 141.4 85 75.3
THA.LOC104809852 Tarenaya hassleriana HOM05D003957 ORTHO05D004833 5.0e-32 141.4 85 77.6
C07p38840 Brassica napus HOM05D003957 ORTHO05D004833 6.5e-32 141.0 85 77.6
BolC7t44403H Brassica oleracea HOM05D003957 ORTHO05D004833 6.5e-32 141.0 85 77.6
ECA248G0218 Erigeron canadensis HOM05D003957 ORTHO05D004833 6.5e-32 141.0 84 75.0
Lj3g0013934 Lotus japonicus HOM05D003957 ORTHO05D004833 6.5e-32 141.0 84 76.2
Nitab4.5_0002918g0090 Nicotiana tabacum HOM05D003531 ORTHO05D004833 6.5e-32 141.0 85 76.5
PGR044G1355 Punica granatum HOM05D003957 ORTHO05D004833 6.5e-32 141.0 85 77.6
QL04p008303 Quercus lobata HOM05D003957 ORTHO05D004833 6.5e-32 141.0 85 75.3
AL8G20240 Arabidopsis lyrata HOM05D003957 ORTHO05D004833 8.6e-32 140.6 85 76.5
A06p39430 Brassica napus HOM05D003957 ORTHO05D004833 8.6e-32 140.6 85 77.6
BraA06t26858Z Brassica rapa HOM05D003957 ORTHO05D004833 8.6e-32 140.6 85 77.6
HanXRQChr01g0016501 Helianthus annuus HOM05D003957 ORTHO05D004833 8.6e-32 140.6 84 75.0
Actinidia20662 Actinidia chinensis HOM05D003957 ORTHO05D004833 1.1e-31 140.2 85 76.5
Ca_19580_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 1.1e-31 140.2 84 75.0
Medtr4g037515 Medicago truncatula HOM05D003957 ORTHO05D004833 1.1e-31 140.2 84 75.0
Rhsim01G0129100 Rhododendron simsii HOM05D003957 ORTHO05D004833 1.1e-31 140.2 85 71.8
Hund21483 Selenicereus undatus HOM05D003957 ORTHO05D004833 1.1e-31 140.2 84 78.6
Thecc.01G409500 Theobroma cacao HOM05D003957 ORTHO05D004833 1.1e-31 140.2 85 75.3
TWI73G1181 Tripterygium wilfordii HOM05D003957 ORTHO05D004833 1.1e-31 140.2 84 71.4
Gohir.A08G143700 Gossypium hirsutum HOM05D003957 ORTHO05D004833 1.5e-31 139.8 85 76.5
AT5G47970 Arabidopsis thaliana HOM05D003957 ORTHO05D004833 1.9e-31 139.4 85 76.5
CARHR184310 Cardamine hirsuta HOM05D003957 ORTHO05D004833 1.9e-31 139.4 85 76.5
Dinv09346 Davidia involucrata HOM05D003957 ORTHO05D004833 1.9e-31 139.4 85 75.3
PSO339G1767 Papaver somniferum HOM05D003957 ORTHO05D004833 1.9e-31 139.4 84 72.6
PSO384G3990 Papaver somniferum HOM05D003957 ORTHO05D004833 1.9e-31 139.4 84 72.6
arahy.Tifrunner.gnm1.ann1.74EFZ5 Arachis hypogaea HOM05D003957 ORTHO05D004833 2.5e-31 139.0 85 76.5
arahy.Tifrunner.gnm1.ann1.N7MVRX Arachis hypogaea HOM05D003957 ORTHO05D004833 2.5e-31 139.0 85 76.5
Eucgr.J01212 Eucalyptus grandis HOM05D003957 ORTHO05D004833 2.5e-31 139.0 85 75.3
Thhalv10004383m.g Eutrema salsugineum HOM05D003957 ORTHO05D004833 2.5e-31 139.0 85 76.5
Glyma.05G135100 Glycine max HOM05D003957 ORTHO05D004833 2.5e-31 139.0 84 75.0
Manes.10G140900 Manihot esculenta HOM05D003957 ORTHO05D004833 2.5e-31 139.0 85 74.1
Potri.001G264900 Populus trichocarpa HOM05D003957 ORTHO05D004833 2.5e-31 139.0 84 75.0
EL10Ac2g04341 Beta vulgaris HOM05D003531 ORTHO05D004354 3.2e-31 138.7 98 69.4
Cc07_g18910 Coffea canephora HOM05D003957 ORTHO05D004833 3.2e-31 138.7 85 75.3
Glyma.10G089600 Glycine max HOM05D003957 ORTHO05D004833 3.2e-31 138.7 85 75.3
Sabra09G0044100 Salix brachista HOM05D003957 ORTHO05D004833 3.2e-31 138.7 84 75.0
Sabra16G0162800 Salix brachista HOM05D003957 ORTHO05D004833 3.2e-31 138.7 84 75.0
Solyc01g087300.3 Solanum lycopersicum HOM05D003957 ORTHO05D004833 3.2e-31 138.7 85 75.3
Sopen01g034340 Solanum pennellii HOM05D003957 ORTHO05D004833 3.2e-31 138.7 85 75.3
COL.COLO4_04863 Corchorus olitorius HOM05D003957 ORTHO05D004833 4.2e-31 138.3 85 76.5
Lalb_Chr25g0282971 Lupinus albus HOM05D003957 ORTHO05D004833 4.2e-31 138.3 85 75.3
RcHm_v2.0_Chr1g0316511 Rosa chinensis HOM05D003957 ORTHO05D004833 4.2e-31 138.3 107 64.5
Sp2g18450 Schrenkiella parvula HOM05D003957 ORTHO05D004833 4.2e-31 138.3 85 75.3
GSVIVG01032128001 Vitis vinifera HOM05D003957 ORTHO05D004833 4.2e-31 138.3 84 76.2
CAN.G219.36 Capsicum annuum HOM05D003957 ORTHO05D004833 5.5e-31 137.9 101 67.3
FvH4_7g01180 Fragaria vesca HOM05D003957 ORTHO05D004833 5.5e-31 137.9 85 76.5
FAN03G2622 Fragaria x ananassa HOM05D003957 ORTHO05D004833 5.5e-31 137.9 85 76.5
FAN06G1255 Fragaria x ananassa HOM05D003957 ORTHO05D004833 5.5e-31 137.9 85 76.5
Gohir.D08G164700 Gossypium hirsutum HOM05D003957 ORTHO05D004833 5.5e-31 137.9 85 74.1
Lj3g0028128 Lotus japonicus HOM05D003957 ORTHO05D004833 5.5e-31 137.9 85 74.1
TWI09G1258 Tripterygium wilfordii HOM05D003957 ORTHO05D004833 5.5e-31 137.9 84 73.8
VMungo1080G1779 Vigna mungo HOM05D003957 ORTHO05D004833 5.5e-31 137.9 85 74.1
Ciclev10031578m.g Citrus clementina HOM05D003957 ORTHO05D004833 7.2e-31 137.5 84 73.8
MD02G1308500 Malus domestica HOM05D003957 ORTHO05D004833 7.2e-31 137.5 101 66.3
MD07G1012900 Malus domestica HOM05D003957 ORTHO05D004833 7.2e-31 137.5 101 67.3
CiPaw.14G000800 Carya illinoinensis HOM05D003957 ORTHO05D004833 9.5e-31 137.1 85 74.1
Prupe.2G015300 Prunus persica HOM05D003957 ORTHO05D004833 9.5e-31 137.1 85 74.1
FAN10G3195 Fragaria x ananassa HOM05D003957 ORTHO05D004833 1.2e-30 136.7 85 75.3
Lsat_1_v5_gn_1_106241 Lactuca sativa HOM05D003957 ORTHO05D004833 1.2e-30 136.7 101 65.3
TAR623G1381 Trochodendron aralioides HOM05D003957 ORTHO05D004833 1.6e-30 136.3 89 68.5
Potri.009G059900 Populus trichocarpa HOM05D003957 ORTHO05D004833 2.1e-30 136.0 84 73.8
Aa31LG11G7420 Aethionema arabicum HOM05D003957 ORTHO05D004833 2.8e-30 135.6 85 74.1
arahy.Tifrunner.gnm1.ann1.X54W53 Arachis hypogaea HOM05D003957 ORTHO05D004833 2.8e-30 135.6 84 75.0
Thhalv10023495m.g Eutrema salsugineum HOM05D003957 ORTHO05D004833 2.8e-30 135.6 84 72.6
MBI02_g05667_MAGBIO Magnolia biondii HOM05D003957 ORTHO05D004833 2.8e-30 135.6 84 75.0
Nn2g15304 Nelumbo nucifera HOM05D003957 ORTHO05D004833 2.8e-30 135.6 85 72.9
Solyc01g087290.3 Solanum lycopersicum HOM05D003957 ORTHO05D004833 2.8e-30 135.6 84 73.8
Sopen01g034330 Solanum pennellii HOM05D003957 ORTHO05D004833 2.8e-30 135.6 84 73.8
PGSC0003DMG400006795 Solanum tuberosum HOM05D003957 ORTHO05D004833 2.8e-30 135.6 84 73.8
AL5G46370 Arabidopsis lyrata HOM05D003957 ORTHO05D004833 4.7e-30 134.8 84 70.2
AUR62009393 Chenopodium quinoa HOM05D003957 ORTHO05D004833 4.7e-30 134.8 98 67.3
Aqoxy1G00278 Aquilegia oxysepala HOM05D003957 ORTHO05D004833 8.0e-30 134.0 84 71.4
AT3G63510 Arabidopsis thaliana HOM05D003957 ORTHO05D004833 8.0e-30 134.0 84 69.0
Os04g0278900 Oryza sativa ssp. japonica HOM05D003957 ORTHO05D004833 8.0e-30 134.0 80 76.2
CARHR291460 Cardamine hirsuta HOM05D003957 ORTHO05D004833 1.8e-29 132.9 84 70.2
SEGI_24417 Sequoiadendron giganteum HOM05D003957 ORTHO05D004833 2.3e-29 132.5 84 71.4
vmacro21189 Vaccinium macrocarpon HOM05D003957 ORTHO05D004833 4.0e-29 131.7 85 68.2
HPP92_013484 Vanilla planifolia HOM05D003957 ORTHO05D004833 4.0e-29 131.7 92 66.3
BcaC06g30833 Brassica carinata HOM05D003957 ORTHO05D004833 5.2e-29 131.3 85 75.3
Ca_14452_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 5.2e-29 131.3 85 71.8
Ca_14453_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 5.2e-29 131.3 85 71.8
CSS0035789 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 8.8e-29 130.6 85 70.6
Sp5g26390 Schrenkiella parvula HOM05D003957 ORTHO05D004833 8.8e-29 130.6 84 66.7
Aa31LG5G18360 Aethionema arabicum HOM05D003957 ORTHO05D004833 1.2e-28 130.2 84 66.7
BcaB03g14880 Brassica carinata HOM05D003957 ORTHO05D004833 1.2e-28 130.2 84 66.7
BcaC08g46558 Brassica carinata HOM05D003957 ORTHO05D004833 1.2e-28 130.2 84 66.7
C06p45340 Brassica napus HOM05D003957 ORTHO05D004833 1.2e-28 130.2 84 66.7
BolC6t39590H Brassica oleracea HOM05D003957 ORTHO05D004833 1.2e-28 130.2 84 66.7
BraA07t31319Z Brassica rapa HOM05D003957 ORTHO05D004833 1.2e-28 130.2 84 66.7
Pp3s97_50 Physcomitrium patens HOM05D003957 ORTHO05D004833 4.4e-28 128.3 86 67.4
A07p37580 Brassica napus HOM05D003957 ORTHO05D004833 5.7e-28 127.9 84 65.5
THA.LOC104817580 Tarenaya hassleriana HOM05D003957 ORTHO05D004833 3.7e-27 125.2 84 66.7
Mapoly0013s0118 Marchantia polymorpha HOM05D003957 ORTHO05D004833 1.4e-26 123.2 92 65.2
SMO174G0131 Selaginella moellendorffii HOM05D003957 ORTHO05D004833 2.0e-25 119.4 85 63.5
CBR_g45512 Chara braunii HOM05D003957 ORTHO05D004833 5.9e-25 117.9 100 53.0
AagrBONN_evm.TU.Sc2ySwM_117.3237 Anthoceros agrestis HOM05D003957 ORTHO05D004833 7.8e-25 117.5 85 64.7
Pp3c7_21950 Physcomitrium patens HOM05D003957 ORTHO05D004833 1.0e-24 117.1 94 58.5
unitig_749.g14329 Utricularia gibba HOM05D003957 ORTHO05D004833 3.3e-23 112.1 66 77.3
AUR62023075 Chenopodium quinoa HOM05D003957 ORTHO05D004833 2.3e-21 105.9 126 46.8
AUR62043481 Chenopodium quinoa HOM05D003957 ORTHO05D004833 2.3e-21 105.9 126 46.8
HPP92_026038 Vanilla planifolia HOM05D003957 ORTHO05D004833 6.8e-21 104.4 73 65.8
MCO14G372 Micromonas commoda HOM05D003957 ORTHO05D004833 8.9e-21 104.0 95 54.7
Cre15.g636896 Chlamydomonas reinhardtii HOM05D003957 ORTHO05D004833 9.8e-20 100.5 105 52.4
Oeu006567.1 Olea europaea HOM05D003957 ORTHO05D004833 1.3e-19 100.1 85 60.0
Haze_03193 Corylus avellana HOM05D000309 ORTHO05D000008 2.9e-19 99.0 60 73.3
Aa31LG10G17380 Aethionema arabicum HOM05D003957 ORTHO05D004833 1.5e-15 86.7 55 69.1
MCO15G235 Micromonas commoda HOM05D003957 ORTHO05D004833 9.5e-15 84.0 87 43.7
Cfa010787 Carpinus fangiana HOM05D003957 ORTHO05D004833 2.8e-14 82.4 45 84.4
Lalb_Chr01g0000371 Lupinus albus HOM05D003957 ORTHO05D004833 4.0e-13 78.6 43 79.1
Ah.00g001340 Amaranthus hybridus HOM05D003957 ORTHO05D004833 1.5e-12 76.6 43 81.4
PRCOL_00000364 Prasinoderma coloniale HOM05D003957 ORTHO05D004833 5.8e-12 74.7 94 40.4
Cfa010780 Carpinus fangiana HOM05D003957 ORTHO05D004833 9.8e-12 73.9 43 79.1
Gohir.D13G107450 Gossypium hirsutum HOM05D003957 ORTHO05D004833 1.3e-11 73.6 43 76.7
Gorai.009G400700 Gossypium raimondii HOM05D003957 ORTHO05D004833 1.3e-11 73.6 42 78.6
Gorai.007G239900 Gossypium raimondii HOM05D003957 ORTHO05D004833 1.7e-11 73.2 75 50.7
Sc11g0009110 Simmondsia chinensis HOM05D003957 ORTHO05D004833 1.7e-11 73.2 42 78.6
CSS0008275 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 3.7e-11 72.0 46 69.6
Gohir.D04G098500 Gossypium hirsutum HOM05D003957 ORTHO05D004833 8.3e-11 70.9 43 74.4
CSS0028199 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 3.5e-09 65.5 42 66.7
DCAR_029679 Daucus carota HOM05D003957 ORTHO05D004833 2.3e-08 62.8 41 65.9
PRCOL_00006504 Prasinoderma coloniale HOM05D003957 ORTHO05D004833 1.9e-07 59.7 92 39.1
Sopen01g034450 Solanum pennellii HOM05D003957 ORTHO05D030633 3.3e-07 58.9 43 65.1
Solyc01g087410.4 Solanum lycopersicum HOM05D003531 ORTHO05D004354 2.1e-06 56.2 43 62.8
Solyc01g087370.2 Solanum lycopersicum HOM05D003531 ORTHO05D030633 2.8e-06 55.8 43 62.8
Solyc01g087390.2 Solanum lycopersicum HOM05D003531 ORTHO05D004354 4.7e-06 55.1 43 60.5


User provided reference genes

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