Gene: Sopen01g034330

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g034330
  • Transcript Identifier Sopen01g034330.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 92173637-92180534 : negative

Gene Family Information

  • ID HOM05D003957
  • #Genes/#Species 176/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g034330.1

Descriptions

  • Description FMN-linked oxidoreductases superfamily protein | FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity | INVOLVED IN: regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel , tRNA-dihydrouridine synthase | BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002943
IEA
InterProtRNA dihydrouridine synthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0017150
IEA
InterProtRNA dihydrouridine synthase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G47970
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G47970
GO:0009524
ISO
PLAZA Integrative Orthologyphragmoplast AT5G47970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035587 DUS-like, FMN-binding domain
IPR013785 Aldolase-type TIM barrel
IPR004653 tRNA-dihydrouridine(20/20a) synthase
Mapman id Description
16.5.4.1 RNA processing.RNA modification.dihydrouridylation.tRNA dihydrouridine synthase