Gene: Nitab4.5_0002918g0090

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0002918g0090
  • Transcript Identifier Nitab4.5_0002918g0090.1
  • Gene Type Coding gene
  • Location Nitab4.5_0002918 : 164125-190320 : negative

Gene Family Information

  • ID HOM05D003531
  • #Genes/#Species 193/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0002918g0090.1
  • SR1-identifier Nta12g21960.1

Descriptions

  • Description Zinc finger, FYVE/PHD-type, Zinc finger, RING/FYVE/PHD-type, Zinc finger, PHD-type, conserved site, Zinc finger, PHD-finger, Zinc finger, PHD-type, Aldolase-type TIM barrel, tRNA-dihydrouridine synthase, Zinc finger, RING-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G52100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G47970
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G52100
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G47970
GO:0009524
ISO
PLAZA Integrative Orthologyphragmoplast AT5G47970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035587 DUS-like, FMN-binding domain
IPR011011 Zinc finger, FYVE/PHD-type
IPR013785 Aldolase-type TIM barrel
IPR001841 Zinc finger, RING-type
IPR001965 Zinc finger, PHD-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
16.5.4.1 RNA processing.RNA modification.dihydrouridylation.tRNA dihydrouridine synthase