Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8564 Utricularia gibba HOM05D002494 ORTHO05D002673 0.0e+00 1404.4 703 100.0
MSTRG.3973 Avicennia marina HOM05D002494 ORTHO05D002673 1.3e-166 590.9 721 47.4
Migut.G00286 Erythranthe guttata HOM05D002494 ORTHO05D002673 2.2e-166 590.1 718 47.5
SGA_v2.0_scaffold237G43852 Striga asiatica HOM05D002494 ORTHO05D002673 4.5e-151 539.3 717 44.2
SalBow2G0767 Salvia bowleyana HOM05D002494 ORTHO05D002673 5.5e-149 532.3 736 43.2
Oeu032696.1 Olea europaea HOM05D002494 ORTHO05D002673 7.2e-149 531.9 730 42.3
Dinv38353 Davidia involucrata HOM05D002494 ORTHO05D002673 1.4e-139 501.1 737 41.7
Lj6C665T16 Lonicera japonica HOM05D002494 ORTHO05D002673 2.5e-133 480.3 685 40.4
CSS0019247 Camellia sinensis var. sinensis HOM05D002494 ORTHO05D002673 4.0e-131 473.0 671 40.8
Actinidia40212 Actinidia chinensis HOM05D002494 ORTHO05D002673 6.8e-131 472.2 689 40.8
Cc03_g02770 Coffea canephora HOM05D002494 ORTHO05D002673 6.8e-131 472.2 698 41.1
Dinv44457 Davidia involucrata HOM05D002494 ORTHO05D002673 1.2e-130 471.5 677 41.1
Nitab4.5_0000010g0140 Nicotiana tabacum HOM05D002494 ORTHO05D002673 5.7e-130 469.2 664 41.1
Nitab4.5_0001505g0010 Nicotiana tabacum HOM05D002494 ORTHO05D002673 2.8e-129 466.8 665 40.8
CiPaw.02G089600 Carya illinoinensis HOM05D002494 ORTHO05D002673 1.1e-128 464.9 693 40.5
CSS0005255 Camellia sinensis var. sinensis HOM05D002494 ORTHO05D002673 1.8e-128 464.2 670 40.7
Actinidia23457 Actinidia chinensis HOM05D002494 ORTHO05D002673 3.1e-128 463.4 692 40.3
CSS0038359 Camellia sinensis var. sinensis HOM05D002494 ORTHO05D002673 3.5e-127 459.9 669 40.5
DCAR_027134 Daucus carota HOM05D002494 ORTHO05D002673 2.2e-126 457.2 722 37.5
Peaxi162Scf00592g00111 Petunia axillaris HOM05D002494 ORTHO05D002673 2.9e-126 456.8 671 39.0
Sopen12g016080 Solanum pennellii HOM05D002494 ORTHO05D002673 1.2e-124 451.4 671 39.3
Thecc.04G272000 Theobroma cacao HOM05D002494 ORTHO05D002673 8.0e-124 448.7 664 40.1
Cfa015542 Carpinus fangiana HOM05D002494 ORTHO05D002673 1.0e-123 448.4 669 41.0
Potri.010G028200 Populus trichocarpa HOM05D002494 ORTHO05D002673 1.8e-123 447.6 678 40.1
vmacro08242 Vaccinium macrocarpon HOM05D002494 ORTHO05D002673 1.8e-123 447.6 738 37.0
Haze_01007 Corylus avellana HOM05D002494 ORTHO05D002673 5.2e-123 446.0 669 41.3
COL.COLO4_13973 Corchorus olitorius HOM05D002494 ORTHO05D002673 4.4e-122 443.0 696 38.2
Manes.03G187900 Manihot esculenta HOM05D002494 ORTHO05D002673 5.7e-122 442.6 671 39.6
Duzib212G0707 Durio zibethinus HOM05D002494 ORTHO05D002673 9.8e-122 441.8 682 40.0
Rhsim04G0212900 Rhododendron simsii HOM05D002494 ORTHO05D002673 9.8e-122 441.8 730 38.1
Gorai.006G256000 Gossypium raimondii HOM05D002494 ORTHO05D002673 1.7e-121 441.0 697 39.6
Gohir.D09G233100 Gossypium hirsutum HOM05D002494 ORTHO05D002673 3.7e-121 439.9 697 39.6
Sabra10G0012600 Salix brachista HOM05D002494 ORTHO05D002673 3.7e-121 439.9 674 39.6
CAN.G290.14 Capsicum annuum HOM05D002494 ORTHO05D002673 2.4e-120 437.2 649 38.2
MD16G1179800 Malus domestica HOM05D002494 ORTHO05D002673 9.2e-120 435.3 677 38.0
Prupe.1G147400 Prunus persica HOM05D002494 ORTHO05D002673 2.0e-119 434.1 681 39.4
Psat1g185440 Pisum sativum HOM05D002494 ORTHO05D002673 2.9e-118 430.3 672 39.1
A03p34620 Brassica napus HOM05D002494 ORTHO05D002673 6.6e-118 429.1 673 39.8
BraA03t12638Z Brassica rapa HOM05D002494 ORTHO05D002673 6.6e-118 429.1 673 39.8
TWI09G0743 Tripterygium wilfordii HOM05D002494 ORTHO05D002673 8.6e-118 428.7 666 38.9
TAR365G0297 Trochodendron aralioides HOM05D002494 ORTHO05D002673 9.5e-117 425.2 701 38.4
MD13G1178600 Malus domestica HOM05D002494 ORTHO05D002673 2.8e-116 423.7 675 37.9
RcHm_v2.0_Chr4g0419781 Rosa chinensis HOM05D002494 ORTHO05D002673 3.0e-115 420.2 672 38.2
Ciclev10004135m.g Citrus clementina HOM05D002494 ORTHO05D002673 4.0e-115 419.9 683 38.4
BolC3t16488H Brassica oleracea HOM05D002494 ORTHO05D002673 6.8e-115 419.1 683 38.2
Glyma.15G100800 Glycine max HOM05D002494 ORTHO05D002673 6.8e-115 419.1 654 38.5
C03p42080 Brassica napus HOM05D002494 ORTHO05D002673 8.9e-115 418.7 683 38.2
BcaB03g14668 Brassica carinata HOM05D002494 ORTHO05D002673 1.2e-114 418.3 692 37.9
VMungo0540G1417 Vigna mungo HOM05D002494 ORTHO05D002673 4.4e-114 416.4 662 38.8
Medtr2g020960 Medicago truncatula HOM05D002494 ORTHO05D002673 7.5e-114 415.6 657 38.7
TPR.G18023 Trifolium pratense HOM05D002494 ORTHO05D002673 7.5e-114 415.6 645 38.8
Phvul.006G158000 Phaseolus vulgaris HOM05D002494 ORTHO05D002673 9.8e-114 415.2 646 38.9
Lj6g0008158 Lotus japonicus HOM05D002494 ORTHO05D002673 2.2e-113 414.1 658 39.2
Cpa.g.sc16.69 Carica papaya HOM05D002494 ORTHO05D002673 3.7e-113 413.3 577 40.4
Lalb_Chr15g0087191 Lupinus albus HOM05D002494 ORTHO05D002673 6.4e-113 412.5 659 37.6
arahy.Tifrunner.gnm1.ann1.2UVC2V Arachis hypogaea HOM05D002494 ORTHO05D002673 2.4e-112 410.6 669 38.6
Thhalv10019892m.g Eutrema salsugineum HOM05D002494 ORTHO05D002673 3.2e-112 410.2 675 37.8
BcaC05g30043 Brassica carinata HOM05D002494 ORTHO05D002673 4.1e-112 409.8 691 37.9
Glyma.13G211900 Glycine max HOM05D002494 ORTHO05D002673 9.2e-112 408.7 692 37.4
Carub.0003s0571 Capsella rubella HOM05D002494 ORTHO05D002673 1.2e-111 408.3 709 36.7
Nn3g21175 Nelumbo nucifera HOM05D002494 ORTHO05D002673 1.2e-111 408.3 671 37.3
Sp3g05200 Schrenkiella parvula HOM05D002494 ORTHO05D002673 1.2e-111 408.3 680 37.6
Aqoxy2G03189 Aquilegia oxysepala HOM05D002494 ORTHO05D002673 3.5e-111 406.8 672 38.2
CANSAT78G1223 Cannabis sativa HOM05D002494 ORTHO05D002673 7.8e-111 405.6 670 37.8
FvH4_4g13920 Fragaria vesca HOM05D002494 ORTHO05D002673 7.8e-111 405.6 668 38.2
A05p41740 Brassica napus HOM05D002494 ORTHO05D002673 1.0e-110 405.2 682 37.5
Eucgr.H03640 Eucalyptus grandis HOM05D002494 ORTHO05D002673 1.7e-110 404.4 697 36.6
BcaC05g30040 Brassica carinata HOM05D002494 ORTHO05D002673 2.3e-110 404.1 684 37.6
AL3G17180 Arabidopsis lyrata HOM05D002494 ORTHO05D002673 3.0e-110 403.7 711 36.4
arahy.Tifrunner.gnm1.ann1.I64MY8 Arachis hypogaea HOM05D002494 ORTHO05D002673 3.9e-110 403.3 668 37.9
FAN12G0871 Fragaria x ananassa HOM05D002494 ORTHO05D002673 3.9e-110 403.3 669 37.5
BraA05t22893Z Brassica rapa HOM05D002494 ORTHO05D002673 5.0e-110 402.9 682 37.5
FAN17G1311 Fragaria x ananassa HOM05D002494 ORTHO05D002673 2.5e-109 400.6 670 37.5
Aa31LG5G16810 Aethionema arabicum HOM05D002494 ORTHO05D002673 3.3e-109 400.2 695 36.3
FAN22G2205 Fragaria x ananassa HOM05D002494 ORTHO05D002673 4.3e-109 399.8 669 37.2
Sed0003410 Sechium edule HOM05D002494 ORTHO05D002673 3.6e-108 396.7 673 38.3
Sc13g0003790 Simmondsia chinensis HOM05D002494 ORTHO05D002673 3.6e-108 396.7 696 36.5
CARHR080780 Cardamine hirsuta HOM05D002494 ORTHO05D002673 6.2e-108 396.0 701 36.7
AT3G06290 Arabidopsis thaliana HOM05D002494 ORTHO05D002673 6.8e-107 392.5 714 35.7
PGR004G0605 Punica granatum HOM05D002494 ORTHO05D002673 6.8e-107 392.5 711 37.7
ClCG05G005560 Citrullus lanatus HOM05D002494 ORTHO05D002673 9.8e-106 388.7 690 37.8
CsaV3_3G013900 Cucumis sativus L. HOM05D002494 ORTHO05D002673 9.8e-106 388.7 672 38.4
MELO3C006582.2 Cucumis melo HOM05D002494 ORTHO05D002673 1.7e-105 387.9 700 38.0
EL10As5g23527 Beta vulgaris HOM05D002494 ORTHO05D002673 1.4e-104 384.8 694 35.7
Ah.02g112310 Amaranthus hybridus HOM05D002494 ORTHO05D002673 1.9e-104 384.4 660 34.1
C05p60980 Brassica napus HOM05D002494 ORTHO05D002673 5.4e-104 382.9 542 41.0
AUR62024657 Chenopodium quinoa HOM05D002494 ORTHO05D002673 5.4e-104 382.9 693 33.3
THA.LOC104818830 Tarenaya hassleriana HOM05D002494 ORTHO05D002673 2.0e-103 380.9 676 37.1
Hund09628 Selenicereus undatus HOM05D002494 ORTHO05D002673 3.5e-103 380.2 691 35.3
PSO302G0174 Papaver somniferum HOM05D002494 ORTHO05D002673 6.6e-102 375.9 666 34.8
PSO170G5860 Papaver somniferum HOM05D002494 ORTHO05D002673 5.6e-101 372.9 671 35.0
Ca_00591_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 1.2e-98 365.2 577 38.1
AUR62011813 Chenopodium quinoa HOM05D002494 ORTHO05D002673 2.2e-97 360.9 662 32.9
BcaC05g29801 Brassica carinata HOM05D002494 ORTHO05D002673 2.7e-95 354.0 677 35.5
SHI00347 Sapria himalayana HOM05D002494 ORTHO05D002673 1.5e-93 348.2 670 36.0
HanXRQChr09g0251551 Helianthus annuus HOM05D002494 ORTHO05D002673 2.5e-93 347.4 679 35.2
ECA233G5784 Erigeron canadensis HOM05D002494 ORTHO05D002673 5.6e-93 346.3 712 34.7
Zm00001eb329290 Zea mays HOM05D002494 ORTHO05D002673 3.6e-92 343.6 659 35.4
ATR0626G271 Amborella trichopoda HOM05D002494 ORTHO05D002673 3.4e-90 337.0 689 33.5
Zm00001eb329320 Zea mays HOM05D002494 ORTHO05D002673 2.7e-87 327.4 657 34.9
Atru.chr4.2700 Acer truncatum HOM05D002494 ORTHO05D002673 4.6e-87 326.6 435 43.4
Zm00001eb329350 Zea mays HOM05D002494 ORTHO05D002673 1.9e-85 321.2 507 38.3
Lsat_1_v5_gn_6_69301 Lactuca sativa HOM05D002494 ORTHO05D002673 1.1e-83 315.5 628 35.7
Gohir.A09G232000 Gossypium hirsutum HOM05D002494 ORTHO05D002673 4.0e-75 287.0 426 42.5
GSVIVG01017853001 Vitis vinifera HOM05D002494 ORTHO05D002673 2.6e-66 257.7 341 44.3
CDE04G2572 Ceratophyllum demersum HOM05D002494 ORTHO05D002673 9.9e-66 255.8 656 31.9
Zm00001eb329310 Zea mays HOM05D002494 ORTHO05D002673 3.4e-58 230.7 454 35.5
AagrBONN_evm.TU.Sc2ySwM_362.842 Anthoceros agrestis HOM05D002494 ORTHO05D002673 1.4e-38 165.6 534 28.1
HPP92_013672 Vanilla planifolia HOM05D002494 ORTHO05D002673 1.1e-35 156.0 222 38.7
SEGI_28422 Sequoiadendron giganteum HOM05D002494 ORTHO05D002673 3.6e-31 141.0 350 32.0
Pp3c3_29590 Physcomitrium patens HOM05D002494 ORTHO05D002673 5.7e-29 133.7 552 25.4
HPP92_013671 Vanilla planifolia HOM05D002494 ORTHO05D002673 7.4e-29 133.3 267 32.6
BcaB03g14660 Brassica carinata HOM05D002494 ORTHO05D002673 2.4e-27 128.3 178 39.9
Mapoly0096s0011 Marchantia polymorpha HOM05D002494 ORTHO05D002673 3.5e-26 124.4 503 25.8
Atru.chr4.2699 Acer truncatum HOM05D002494 ORTHO05D002673 5.3e-19 100.5 122 42.6
Zm00001eb302530 Zea mays HOM05D002494 ORTHO05D002673 7.7e-18 96.7 170 34.7
Zm00001eb160540 Zea mays HOM05D002494 ORTHO05D002673 2.2e-17 95.1 103 44.7
Zm00001eb302540 Zea mays HOM05D002494 ORTHO05D002673 2.9e-17 94.7 103 44.7
Solyc12g035670.3 Solanum lycopersicum HOM05D002494 ORTHO05D002673 2.3e-14 85.1 128 41.4
TPR.G14187 Trifolium pratense HOM05D002494 ORTHO05D002673 1.5e-13 82.4 148 35.8
Zm00001eb094450 Zea mays HOM05D002494 ORTHO05D002673 2.0e-13 82.0 86 45.3
BcaB03g14661 Brassica carinata HOM05D002494 ORTHO05D002673 4.8e-12 77.4 176 33.5
Zm00001eb171280 Zea mays HOM05D002494 ORTHO05D002673 1.6e-10 72.4 70 48.6
BolC5t34753H Brassica oleracea HOM05D002494 ORTHO05D002673 2.0e-10 72.0 68 48.5


User provided reference genes

Program Settings