Gene: Solyc12g035670.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g035670.3
  • Transcript Identifier Solyc12g035670.3.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 43014409-43033064 : positive

Gene Family Information

  • ID HOM05D002494
  • #Genes/#Species 273/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g035670.3.1
  • uniprot A0A3Q7J7I1
  • gene_id Solyc12g035670

Descriptions

  • Description SAC3/GANP/Nin1/mts3/eIF-3 p25 (AHRD V3.3 *** A0A200QLU7_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006406
IBA
GOA DatabasemRNA export from nucleus
GO:0044030
ISO
PLAZA Integrative Orthologyregulation of DNA methylation AT3G06290
GO:0090065
ISO
PLAZA Integrative Orthologyregulation of production of siRNA involved in RNA interference AT3G06290
GO:0060968
ISO
PLAZA Integrative Orthologyregulation of gene silencing AT3G06290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070390
IBA
GOA Databasetranscription export complex 2
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005634
IBA
GOA Databasenucleus
GO:0034399
ISO
PLAZA Integrative Orthologynuclear periphery AT3G06290

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005062 SAC3/GANP/THP3, conserved domain
IPR045107 SAC3/GANP/THP3
Mapman id Description
16.10.2.1 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.scaffold component GANP/SAC3