Gene: ClCG05G005560

General Information

Structural Information

  • Species Citrullus lanatus
  • Gene Identifier ClCG05G005560
  • Transcript Identifier ClCG05G005560.1
  • Gene Type Coding gene
  • Location CG_Chr05 : 5444003-5454322 : negative

Gene Family Information

  • ID HOM05D002494
  • #Genes/#Species 273/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid ClCG05G005560.1
  • name maker-CGscf_0002-augustus-gene-15.511
  • name maker-CGscf_0002-augustus-gene-15.511-mRNA-1

Descriptions

  • Description SAC3/GANP/Nin1/mts3/eIF-3 p25 family LENGTH=1697
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044030
ISO
PLAZA Integrative Orthologyregulation of DNA methylation AT3G06290
GO:0090065
ISO
PLAZA Integrative Orthologyregulation of production of siRNA involved in RNA interference AT3G06290
GO:0060968
ISO
PLAZA Integrative Orthologyregulation of gene silencing AT3G06290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034399
ISO
PLAZA Integrative Orthologynuclear periphery AT3G06290

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045107 SAC3/GANP/THP3
IPR005062 SAC3/GANP/THP3, conserved domain
Mapman id Description
16.10.2.1 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.scaffold component GANP/SAC3