Gene: Carub.0003s0571

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s0571
  • Transcript Identifier Carub.0003s0571.1
  • Gene Type Coding gene
  • Location scaffold_3 : 1934224-1942110 : negative

Gene Family Information

  • ID HOM05D002494
  • #Genes/#Species 273/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s0571.v1.1
  • pacid 39241051
  • synonym Carubv10015362m.g

Descriptions

  • Description PTHR12436//PTHR12436:SF17 - 80 KDA MCM3-ASSOCIATED PROTEIN // SAC3/GANP/NIN1/MTS3/EIF-3 P25 FAMILY PROTEIN
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044030
ISO
PLAZA Integrative Orthologyregulation of DNA methylation AT3G06290
GO:0090065
ISO
PLAZA Integrative Orthologyregulation of production of siRNA involved in RNA interference AT3G06290
GO:0060968
ISO
PLAZA Integrative Orthologyregulation of gene silencing AT3G06290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034399
ISO
PLAZA Integrative Orthologynuclear periphery AT3G06290

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005062 SAC3/GANP/THP3, conserved domain
IPR045107 SAC3/GANP/THP3
IPR031907 Germinal-centre associated nuclear protein, MCM3AP domain
Mapman id Description
16.10.2.1 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.scaffold component GANP/SAC3