Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 4.5e-197 691.0 345 100.0
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 1.8e-124 449.9 356 66.6
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 6.7e-124 448.0 347 68.9
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 2.2e-122 443.0 350 67.1
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 5.3e-121 438.3 357 64.7
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 2.6e-120 436.0 292 75.3
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 3.2e-118 429.1 347 64.8
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 9.4e-118 427.6 345 64.6
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 9.4e-118 427.6 334 67.7
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.7e-117 426.0 329 66.0
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 3.6e-117 425.6 319 70.2
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.4e-116 423.7 328 66.2
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 2.3e-116 422.9 319 69.9
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 3.0e-116 422.5 344 61.9
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 3.9e-116 422.2 307 68.4
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 6.7e-116 421.4 302 71.5
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 8.8e-116 421.0 354 61.3
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 1.5e-115 420.2 316 67.4
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.5e-115 420.2 329 64.7
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.5e-115 420.2 329 64.7
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 2.0e-115 419.9 335 66.0
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 3.3e-115 419.1 297 71.0
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 3.3e-115 419.1 297 71.0
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.3e-115 419.1 330 64.8
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 4.4e-115 418.7 346 63.3
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 4.4e-115 418.7 287 71.4
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 5.7e-115 418.3 306 69.3
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 7.4e-115 417.9 301 68.1
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 7.4e-115 417.9 297 71.0
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 9.7e-115 417.5 352 61.4
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 1.3e-114 417.2 329 64.4
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 2.2e-114 416.4 340 63.2
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 6.3e-114 414.8 325 67.7
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 6.3e-114 414.8 355 62.5
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 6.3e-114 414.8 365 59.5
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 8.2e-114 414.5 303 70.6
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 8.2e-114 414.5 303 69.3
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 2.4e-113 412.9 301 68.8
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 2.4e-113 412.9 301 68.8
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 2.4e-113 412.9 300 67.3
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 2.4e-113 412.9 322 65.2
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 3.1e-113 412.5 300 70.7
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 4.1e-113 412.1 336 64.6
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 5.3e-113 411.8 299 70.9
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 9.1e-113 411.0 357 60.2
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 1.2e-112 410.6 315 67.6
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 2.6e-112 409.5 314 65.6
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 2.6e-112 409.5 305 68.5
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 2.6e-112 409.5 362 60.5
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 7.7e-112 407.9 319 66.8
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 1.3e-111 407.1 324 63.9
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 2.9e-111 406.0 308 66.9
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 2.9e-111 406.0 305 68.9
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 2.9e-111 406.0 303 68.3
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 6.5e-111 404.8 304 67.8
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.1e-110 404.1 308 69.2
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 1.9e-110 403.3 308 66.6
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 3.2e-110 402.5 313 63.9
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 3.2e-110 402.5 340 64.4
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 4.2e-110 402.1 301 67.1
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 7.2e-110 401.4 339 64.0
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 9.4e-110 401.0 302 67.2
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 2.1e-109 399.8 353 62.9
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 2.7e-109 399.4 364 58.5
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 3.6e-109 399.1 314 65.3
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 4.7e-109 398.7 354 60.2
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 6.1e-109 398.3 343 61.2
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 2.3e-108 396.4 297 68.4
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.0e-108 396.0 294 69.0
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 2.0e-107 393.3 353 60.1
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 2.0e-107 393.3 307 65.5
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 4.8e-106 388.7 372 55.9
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 6.3e-106 388.3 295 68.1
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 1.1e-105 387.5 319 64.6
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 2.4e-105 386.3 297 67.0
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 2.4e-105 386.3 317 64.4
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 7.0e-105 384.8 315 64.1
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 4.5e-104 382.1 312 63.8
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 6.5e-103 378.3 214 85.0
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 5.5e-102 375.2 284 67.3
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 3.6e-101 372.5 249 73.9
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.0e-100 370.9 248 71.4
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 1.8e-100 370.2 291 66.0
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 1.8e-100 370.2 316 63.0
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 2.3e-100 369.8 303 65.3
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 3.0e-100 369.4 248 70.6
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 2.6e-99 366.3 277 67.9
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 5.7e-99 365.2 285 66.3
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 7.5e-99 364.8 241 73.4
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 2.8e-98 362.8 310 62.9
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 5.3e-97 358.6 300 64.0
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 3.8e-95 352.4 220 75.5
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 6.1e-93 345.1 202 77.2
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 2.6e-91 339.7 312 56.7
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 4.4e-91 339.0 276 60.9
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 2.2e-90 336.7 212 77.4
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 1.6e-88 330.5 260 64.6
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 5.9e-88 328.6 261 63.6
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 1.3e-87 327.4 385 49.4
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 3.4e-75 286.2 322 50.6
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.9e-74 283.1 208 69.2
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 4.9e-74 282.3 166 80.1
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 4.1e-73 279.3 233 60.5
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.0e-71 274.6 249 59.0
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 9.5e-70 268.1 173 74.0
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 1.2e-69 267.7 328 46.6
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 8.0e-69 265.0 303 52.5
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 8.9e-68 261.5 258 53.5
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 6.4e-66 255.4 140 85.0
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 3.2e-65 253.1 147 79.6
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 8.6e-63 245.0 223 53.8
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 8.6e-47 191.8 253 48.6
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.0e-43 180.6 251 44.6
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 4.2e-41 172.9 187 46.0
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 7.8e-40 168.7 247 37.2
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 3.5e-32 143.3 149 55.7
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 1.3e-31 141.4 196 37.2
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 1.1e-25 121.7 159 44.7
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 4.5e-19 99.8 72 68.1
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 7.4e-14 82.4 141 36.9
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 3.0e-07 60.5 34 73.5


User provided reference genes

Program Settings