Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 0.0e+00 1376.3 687 100.0
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 1.8e-149 533.9 791 44.0
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 3.6e-145 519.6 767 43.2
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 1.4e-128 464.5 776 39.9
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 7.8e-124 448.7 769 40.1
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 1.7e-123 447.6 830 38.7
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 1.9e-122 444.1 739 39.8
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 7.3e-122 442.2 766 39.0
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 3.1e-120 436.8 771 39.0
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 5.2e-120 436.0 749 38.7
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 8.9e-120 435.3 772 38.5
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 1.2e-119 434.9 768 37.5
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 1.5e-119 434.5 769 38.6
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 3.4e-119 433.3 769 38.6
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 7.6e-119 432.2 757 37.4
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 1.7e-118 431.0 752 39.0
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 1.7e-118 431.0 753 38.6
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 2.9e-118 430.3 766 39.3
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 3.8e-118 429.9 771 38.0
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 3.8e-118 429.9 770 37.4
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 1.4e-117 427.9 751 38.7
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 2.4e-117 427.2 765 37.9
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 3.2e-117 426.8 761 38.8
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 6.0e-116 422.5 761 38.9
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 3.0e-115 420.2 762 36.2
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 5.1e-115 419.5 757 37.1
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 4.3e-114 416.4 757 37.9
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 5.6e-114 416.0 763 37.6
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 3.6e-113 413.3 745 36.9
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 2.0e-111 407.5 746 37.0
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 3.4e-111 406.8 744 36.6
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 7.6e-111 405.6 804 36.3
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 6.4e-110 402.5 776 37.8
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 7.1e-109 399.1 751 36.9
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 1.2e-108 398.3 767 36.0
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 3.5e-108 396.7 712 37.5
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 1.3e-107 394.8 756 37.3
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 1.9e-106 391.0 780 36.3
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 9.6e-106 388.7 767 36.9
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 4.0e-104 383.3 788 35.9
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 5.3e-104 382.9 771 36.2
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.5e-103 381.3 771 36.1
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 3.4e-103 380.2 754 36.3
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 3.4e-103 380.2 768 36.2
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 1.3e-102 378.3 771 35.5
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 1.1e-101 375.2 761 35.5
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 1.9e-101 374.4 761 34.7
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 1.9e-101 374.4 764 35.6
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 1.2e-100 371.7 773 36.1
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 1.2e-100 371.7 761 35.1
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 1.6e-100 371.3 766 34.5
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 1.3e-99 368.2 766 35.1
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 1.1e-98 365.2 750 35.1
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 1.1e-98 365.2 750 35.1
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 1.1e-98 365.2 750 35.1
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 1.5e-98 364.8 762 34.5
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.9e-98 364.4 654 37.8
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 2.5e-98 364.0 760 34.5
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 7.4e-98 362.5 755 35.1
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 9.6e-98 362.1 763 34.9
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 9.6e-98 362.1 739 36.7
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 3.7e-97 360.1 684 37.6
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 9.0e-96 355.5 758 35.2
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 3.4e-95 353.6 700 36.4
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 1.7e-94 351.3 764 34.4
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 4.9e-94 349.7 773 34.0
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 8.4e-94 349.0 896 32.4
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 7.1e-93 345.9 748 34.5
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 9.3e-93 345.5 717 36.4
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 2.7e-92 344.0 708 36.0
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 7.9e-92 342.4 710 35.8
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.5e-90 338.2 630 37.0
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 3.3e-90 337.0 747 32.8
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 8.4e-86 322.4 749 34.2
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 6.7e-83 312.8 653 34.9
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 5.7e-82 309.7 744 33.9
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 6.9e-80 302.8 744 33.6
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 6.9e-80 302.8 748 31.7
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 3.3e-74 283.9 739 32.5
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 3.7e-73 280.4 745 31.0
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 5.9e-71 273.1 749 31.0
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 1.1e-69 268.9 762 30.4
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 1.4e-69 268.5 738 29.3
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 1.4e-69 268.5 530 35.8
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 1.4e-67 261.9 543 35.5
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 3.9e-67 260.4 744 31.5
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.5e-66 258.5 750 28.7
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 4.4e-66 256.9 623 32.7
Psat5g213680 Pisum sativum HOM05D004944 ORTHO05D005989 7.4e-66 256.1 540 35.4
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 2.8e-65 254.2 525 33.9
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 4.1e-64 250.4 540 35.0
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 7.0e-64 249.6 724 30.2
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 1.7e-62 245.0 707 30.7
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 2.9e-62 244.2 630 31.6
Peaxi162Scf00309g00015 Petunia axillaris HOM05D004944 ORTHO05D005989 8.0e-60 236.1 608 31.6
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 4.2e-53 213.8 749 27.0
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 1.6e-52 211.8 575 31.0
Sc10g0004230 Simmondsia chinensis HOM05D004944 ORTHO05D005989 2.6e-50 204.5 540 32.6
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 1.1e-48 199.1 767 27.2
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 2.4e-48 198.0 142 64.8
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 9.1e-48 196.1 698 29.1
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.6e-47 195.3 150 64.7
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 3.8e-46 190.7 164 58.5
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 6.5e-46 189.9 142 62.0
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 4.2e-45 187.2 753 26.0
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 2.1e-44 184.9 749 24.7
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 1.8e-43 181.8 142 63.4
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 1.5e-42 178.7 141 58.9
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 3.4e-42 177.6 144 62.5
vmacro13722 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 1.2e-39 169.1 456 31.4
Ca_04546_v3 Cicer arietinum L. HOM05D004944 ORTHO05D005989 9.5e-37 159.5 495 27.1
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 3.6e-36 157.5 165 52.1
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 3.6e-36 157.5 621 26.6
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 6.1e-36 156.8 141 56.0
FAN10G4268 Fragaria x ananassa HOM05D004944 ORTHO05D005989 4.0e-35 154.1 328 34.8
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 2.2e-33 148.3 109 66.1
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 3.7e-33 147.5 272 37.1
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 9.2e-32 142.9 150 51.3
Lj9A645G78 Lonicera japonica HOM05D004944 ORTHO05D005989 4.6e-31 140.6 331 32.6
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 5.2e-27 127.1 142 50.0
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 8.9e-27 126.3 147 46.9
Lj9A645G77 Lonicera japonica HOM05D004944 ORTHO05D005989 1.7e-25 122.1 146 43.8
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 2.1e-20 105.1 271 28.8
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 1.1e-19 102.8 300 26.3
FAN01G1245 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.3e-19 101.7 147 42.9
CSS0031841 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 7.1e-16 90.1 218 33.5
RcHm_v2.0_Chr4g0391951 Rosa chinensis HOM05D004944 ORTHO05D005989 5.1e-14 84.0 86 46.5
Lalb_Chr04g0263911 Lupinus albus HOM05D004944 ORTHO05D005989 1.5e-13 82.4 60 53.3
Psat5g213600 Pisum sativum HOM05D004944 ORTHO05D005989 1.9e-13 82.0 136 33.8
ATR0721G017 Amborella trichopoda HOM05D004944 ORTHO05D005989 4.3e-13 80.9 257 28.8
Prupe.2G099800 Prunus persica HOM05D004944 ORTHO05D005989 5.8e-10 70.5 57 57.9
SHI03974 Sapria himalayana HOM05D004944 ORTHO05D005989 7.6e-10 70.1 141 36.9
SHI03965 Sapria himalayana HOM05D004944 ORTHO05D005989 6.4e-09 67.0 60 51.7
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 1.4e-08 65.9 49 59.2


User provided reference genes

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