Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25620 Utricularia gibba HOM05D001988 ORTHO05D004985 0.0e+00 1325.5 651 100.0
MSTRG.27418 Avicennia marina HOM05D001988 ORTHO05D004985 6.2e-187 658.3 683 51.7
SGA_v2.0_scaffold58G20462 Striga asiatica HOM05D001988 ORTHO05D004985 1.3e-176 624.0 643 51.9
Migut.F02100 Erythranthe guttata HOM05D001988 ORTHO05D004985 1.5e-169 600.5 675 47.6
SalBow1G3615 Salvia bowleyana HOM05D001988 ORTHO05D004985 7.3e-164 581.6 668 48.2
Nitab4.5_0000428g0180 Nicotiana tabacum HOM05D001988 ORTHO05D004985 3.4e-153 546.2 683 44.8
Nitab4.5_0007649g0010 Nicotiana tabacum HOM05D001988 ORTHO05D004985 3.5e-150 536.2 683 43.9
Actinidia19875 Actinidia chinensis HOM05D001988 ORTHO05D004985 2.1e-147 526.9 683 43.5
Cc09_g03970 Coffea canephora HOM05D001988 ORTHO05D004985 1.7e-144 517.3 663 44.3
Peaxi162Scf00217g00713 Petunia axillaris HOM05D001988 ORTHO05D004985 1.4e-143 514.2 678 43.2
PGSC0003DMG401018705 Solanum tuberosum HOM05D001988 ORTHO05D004985 5.5e-143 512.3 673 43.8
Solyc11g071540.2 Solanum lycopersicum HOM05D001988 ORTHO05D004985 1.6e-142 510.8 672 43.9
Sopen11g029230 Solanum pennellii HOM05D001988 ORTHO05D004985 6.0e-142 508.8 672 43.6
CAN.G439.30 Capsicum annuum HOM05D001988 ORTHO05D004985 7.9e-142 508.4 657 44.1
Migut.I00421 Erythranthe guttata HOM05D001988 ORTHO05D004985 1.1e-140 504.6 641 44.1
Lj8A318G47 Lonicera japonica HOM05D001988 ORTHO05D004985 1.5e-137 494.2 638 43.4
GSVIVG01019982001 Vitis vinifera HOM05D001988 ORTHO05D004985 6.5e-136 488.8 640 42.3
Eucgr.B03445 Eucalyptus grandis HOM05D001988 ORTHO05D004985 8.4e-136 488.4 700 40.1
Rhsim12G0063800 Rhododendron simsii HOM05D001988 ORTHO05D004985 2.5e-135 486.9 682 40.9
CSS0030030 Camellia sinensis var. sinensis HOM05D001988 ORTHO05D004985 6.7e-133 478.8 683 40.3
Cpa.g.sc128.24 Carica papaya HOM05D001988 ORTHO05D004985 3.3e-132 476.5 683 40.4
Glyma.11G111300 Glycine max HOM05D001988 ORTHO05D004985 3.3e-132 476.5 688 40.8
Phvul.011G039300 Phaseolus vulgaris HOM05D001988 ORTHO05D004985 5.7e-132 475.7 692 40.9
PGR102G2417 Punica granatum HOM05D001988 ORTHO05D004985 9.7e-132 474.9 657 41.7
vmacro01260 Vaccinium macrocarpon HOM05D001988 ORTHO05D004985 9.7e-132 474.9 683 40.1
HanXRQChr09g0255131 Helianthus annuus HOM05D001988 ORTHO05D004985 1.6e-131 474.2 645 41.7
Cfa008981 Carpinus fangiana HOM05D001988 ORTHO05D004985 2.8e-131 473.4 693 40.7
QL03p064038 Quercus lobata HOM05D001988 ORTHO05D004985 2.4e-130 470.3 691 39.4
Lsat_1_v5_gn_5_156781 Lactuca sativa HOM05D001988 ORTHO05D004985 4.1e-130 469.5 646 42.0
QL03p063402 Quercus lobata HOM05D001988 ORTHO05D004985 4.1e-130 469.5 691 39.8
Lsat_1_v5_gn_8_100701 Lactuca sativa HOM05D001988 ORTHO05D004985 3.4e-129 466.5 652 42.0
Sopen09g001990 Solanum pennellii HOM05D001988 ORTHO05D004985 3.4e-129 466.5 663 41.0
HanXRQChr05g0145521 Helianthus annuus HOM05D001988 ORTHO05D004985 1.0e-128 464.9 647 41.4
Solyc09g007120.4 Solanum lycopersicum HOM05D001988 ORTHO05D004985 1.0e-128 464.9 663 40.7
Lj3g0010541 Lotus japonicus HOM05D001988 ORTHO05D004985 1.7e-128 464.2 669 40.4
Prupe.1G174900 Prunus persica HOM05D001988 ORTHO05D004985 5.0e-128 462.6 686 40.2
Ciclev10030768m.g Citrus clementina HOM05D001988 ORTHO05D004985 2.5e-127 460.3 717 38.4
VMungo1127G0715 Vigna mungo HOM05D001988 ORTHO05D004985 9.3e-127 458.4 688 40.0
CANSAT54G1389 Cannabis sativa HOM05D001988 ORTHO05D004985 4.6e-126 456.1 719 38.8
Manes.01G185700 Manihot esculenta HOM05D001988 ORTHO05D004985 2.3e-125 453.8 702 39.3
Lalb_Chr14g0368981 Lupinus albus HOM05D001988 ORTHO05D004985 6.7e-125 452.2 695 39.7
Gohir.D05G304800 Gossypium hirsutum HOM05D001988 ORTHO05D004985 2.8e-123 446.8 672 39.7
Medtr4g057650 Medicago truncatula HOM05D001988 ORTHO05D004985 2.8e-123 446.8 651 39.0
Gorai.009G324500 Gossypium raimondii HOM05D001988 ORTHO05D004985 3.7e-123 446.4 672 39.7
ECA248G0899 Erigeron canadensis HOM05D001988 ORTHO05D004985 6.3e-123 445.7 670 39.1
Sabra10G0129300 Salix brachista HOM05D001988 ORTHO05D004985 1.1e-122 444.9 687 39.0
MD04G1025400 Malus domestica HOM05D001988 ORTHO05D004985 2.4e-122 443.7 673 39.4
Thecc.02G346500 Theobroma cacao HOM05D001988 ORTHO05D004985 3.1e-122 443.4 694 39.0
vmacro01166 Vaccinium macrocarpon HOM05D001988 ORTHO05D004985 4.1e-122 443.0 689 39.2
CiPaw.05G135300 Carya illinoinensis HOM05D001988 ORTHO05D004985 1.2e-121 441.4 560 42.5
Ca_20931_v3 Cicer arietinum L. HOM05D001988 ORTHO05D004985 1.3e-120 438.0 682 39.0
Psat7g139200 Pisum sativum HOM05D001988 ORTHO05D004985 1.3e-120 438.0 655 40.0
ECA234G0637 Erigeron canadensis HOM05D001988 ORTHO05D004985 3.8e-120 436.4 641 39.0
ClCG11G010950 Citrullus lanatus HOM05D001988 ORTHO05D004985 7.2e-119 432.2 681 38.8
Lsat_1_v5_gn_4_55321 Lactuca sativa HOM05D001988 ORTHO05D004985 9.4e-119 431.8 636 40.9
TPR.G27077 Trifolium pratense HOM05D001988 ORTHO05D004985 1.6e-118 431.0 654 39.0
Duzib251G0871 Durio zibethinus HOM05D001988 ORTHO05D004985 7.9e-118 428.7 675 38.8
FAN21G2649 Fragaria x ananassa HOM05D001988 ORTHO05D004985 1.4e-117 427.9 691 38.8
Gohir.A05G183600 Gossypium hirsutum HOM05D001988 ORTHO05D004985 2.3e-117 427.2 673 38.9
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 3.0e-117 426.8 679 39.0
FvH4_3g26291 Fragaria vesca HOM05D001988 ORTHO05D004985 6.7e-117 425.6 679 38.9
Sed0003814 Sechium edule HOM05D001988 ORTHO05D004985 1.5e-116 424.5 702 36.3
arahy.Tifrunner.gnm1.ann1.41IR6N Arachis hypogaea HOM05D001988 ORTHO05D004985 2.0e-116 424.1 701 37.8
Haze_12013 Corylus avellana HOM05D001988 ORTHO05D004985 2.0e-116 424.1 806 34.0
Medtr4g071660 Medicago truncatula HOM05D001988 ORTHO05D004985 2.0e-116 424.1 632 38.3
arahy.Tifrunner.gnm1.ann1.8UN484 Arachis hypogaea HOM05D001988 ORTHO05D004985 2.6e-116 423.7 701 37.7
AUR62005788 Chenopodium quinoa HOM05D001988 ORTHO05D004985 2.6e-116 423.7 702 37.6
Hund05880 Selenicereus undatus HOM05D001988 ORTHO05D004985 7.4e-116 422.2 694 37.8
EL10Ac6g13205 Beta vulgaris HOM05D001988 ORTHO05D004985 9.7e-116 421.8 665 37.4
MELO3C008752.2 Cucumis melo HOM05D001988 ORTHO05D004985 1.3e-115 421.4 712 36.1
arahy.Tifrunner.gnm1.ann1.AY0VQT Arachis hypogaea HOM05D001988 ORTHO05D004985 1.1e-114 418.3 701 37.7
TWI53G0339 Tripterygium wilfordii HOM05D001988 ORTHO05D004985 3.1e-114 416.8 671 38.5
FAN25G3604 Fragaria x ananassa HOM05D001988 ORTHO05D006298 6.9e-114 415.6 691 38.2
Nn4g23157 Nelumbo nucifera HOM05D001988 ORTHO05D004985 1.3e-112 411.4 709 37.5
THA.LOC104805159 Tarenaya hassleriana HOM05D001988 ORTHO05D004985 2.9e-112 410.2 657 38.2
EL10Ac9g22126 Beta vulgaris HOM05D001988 ORTHO05D004985 8.5e-112 408.7 707 35.8
Aa31LG2G7390 Aethionema arabicum HOM05D001988 ORTHO05D004985 4.7e-110 402.9 676 37.0
Dinv16646 Davidia involucrata HOM05D001988 ORTHO05D004985 1.0e-109 401.7 450 46.7
Oeu037938.2 Olea europaea HOM05D001988 ORTHO05D004985 3.9e-109 399.8 477 46.3
CsaV3_2G009530 Cucumis sativus L. HOM05D001988 ORTHO05D004985 9.7e-108 395.2 589 38.9
SHI13475 Sapria himalayana HOM05D001988 ORTHO05D004985 1.3e-107 394.8 652 35.4
FAN25G3456 Fragaria x ananassa HOM05D001988 ORTHO05D004985 6.3e-107 392.5 674 37.7
AUR62028773 Chenopodium quinoa HOM05D001988 ORTHO05D004985 1.6e-105 387.9 590 38.6
AT2G02955 Arabidopsis thaliana HOM05D001988 ORTHO05D004985 2.2e-104 384.0 646 35.9
TPR.G16225 Trifolium pratense HOM05D001988 ORTHO05D004985 2.5e-103 380.6 645 37.1
Carub.0005s0183 Capsella rubella HOM05D001988 ORTHO05D004985 5.5e-103 379.4 669 36.8
Sc11g0001930 Simmondsia chinensis HOM05D001988 ORTHO05D004985 5.5e-103 379.4 674 35.8
DCAR_007151 Daucus carota HOM05D001988 ORTHO05D004985 9.4e-103 378.6 646 36.8
Aqoxy1G01101 Aquilegia oxysepala HOM05D001988 ORTHO05D004985 1.2e-102 378.3 694 33.7
Ah.05g179340 Amaranthus hybridus HOM05D001988 ORTHO05D004985 8.0e-102 375.6 663 35.4
AL5G12570 Arabidopsis lyrata HOM05D001988 ORTHO05D004985 3.0e-101 373.6 676 34.8
Thhalv10027666m.g Eutrema salsugineum HOM05D001988 ORTHO05D004985 4.8e-99 366.3 661 35.6
Hma1.2p1_0265F.1_g106750 Hydrangea macrophylla HOM05D001988 ORTHO05D004985 8.2e-99 365.5 396 48.5
TAR629G1399 Trochodendron aralioides HOM05D001988 ORTHO05D004985 9.1e-98 362.1 502 44.0
HPP92_021577 Vanilla planifolia HOM05D001988 ORTHO05D004985 1.5e-95 354.8 681 33.2
AL6G52060 Arabidopsis lyrata HOM05D001988 ORTHO05D004985 9.4e-95 352.1 636 36.0
A09p68050 Brassica napus HOM05D001988 ORTHO05D004985 1.2e-94 351.7 652 34.2
Sp7g05500 Schrenkiella parvula HOM05D001988 ORTHO05D004985 1.2e-94 351.7 663 35.0
BolC8t52776H Brassica oleracea HOM05D001988 ORTHO05D004985 4.7e-94 349.7 647 34.9
PSO063G4641 Papaver somniferum HOM05D001988 ORTHO05D004985 4.7e-94 349.7 633 34.9
C08p52490 Brassica napus HOM05D001988 ORTHO05D004985 8.0e-94 349.0 650 34.6
PSO017G3571 Papaver somniferum HOM05D001988 ORTHO05D004985 1.8e-93 347.8 634 35.5
BraA09t42140Z Brassica rapa HOM05D001988 ORTHO05D004985 4.0e-93 346.7 654 34.3
CDE07G0941 Ceratophyllum demersum HOM05D001988 ORTHO05D004985 6.8e-93 345.9 570 36.0
Medtr5g067430 Medicago truncatula HOM05D001988 ORTHO05D004985 6.8e-93 345.9 641 36.0
BcaC07g42212 Brassica carinata HOM05D001988 ORTHO05D004985 1.5e-92 344.7 647 34.2
RcHm_v2.0_Chr5g0048641 Rosa chinensis HOM05D001988 ORTHO05D004985 2.8e-91 340.5 524 40.1
Eucgr.B03444 Eucalyptus grandis HOM05D001988 ORTHO05D004985 5.4e-90 336.3 459 41.8
RcHm_v2.0_Chr7g0220021 Rosa chinensis HOM05D001988 ORTHO05D004985 7.0e-90 335.9 509 39.9
Zm00001eb284870 Zea mays HOM05D001988 ORTHO05D004985 1.6e-86 324.7 650 33.1
Carub.0006s3640 Capsella rubella HOM05D001988 ORTHO05D004985 4.9e-83 313.2 535 34.8
Oeu007681.1 Olea europaea HOM05D001988 ORTHO05D004985 1.8e-77 294.7 292 50.0
SEGI_17598 Sequoiadendron giganteum HOM05D001988 ORTHO05D004985 2.6e-76 290.8 711 29.4
MBI19_g09828_MAGBIO Magnolia biondii HOM05D001988 ORTHO05D004985 2.4e-74 284.3 509 35.8
CARHR145370 Cardamine hirsuta HOM05D001988 ORTHO05D004985 1.6e-73 281.6 445 37.1
AUR62008859 Chenopodium quinoa HOM05D001988 ORTHO05D004985 1.6e-73 281.6 301 46.2
SEGI_28471 Sequoiadendron giganteum HOM05D001988 ORTHO05D004985 2.7e-73 280.8 695 28.8
Potri.010G169500 Populus trichocarpa HOM05D001988 ORTHO05D004985 8.9e-69 265.8 376 41.8
Thhalv10004418m.g Eutrema salsugineum HOM05D001988 ORTHO05D004985 5.4e-66 256.5 335 41.2
Pp3c9_8400 Physcomitrium patens HOM05D001988 ORTHO05D004985 1.4e-61 241.9 686 27.4
Hund25598 Selenicereus undatus HOM05D001988 ORTHO05D004985 8.9e-61 239.2 520 32.5
arahy.Tifrunner.gnm1.ann1.N3HM5N Arachis hypogaea HOM05D001988 ORTHO05D004985 1.2e-57 228.8 377 36.1
Mapoly0075s0087 Marchantia polymorpha HOM05D001988 ORTHO05D004985 1.1e-50 205.7 814 24.8
PGSC0003DMG400002020 Solanum tuberosum HOM05D001988 ORTHO05D004985 1.7e-48 198.4 168 56.0
ATR0782G208 Amborella trichopoda HOM05D001988 ORTHO05D004985 8.7e-48 196.1 378 34.4
Atru.chr11.1785 Acer truncatum HOM05D001988 ORTHO05D004985 4.3e-47 193.7 349 35.2
AagrBONN_evm.TU.Sc2ySwM_362.1334 Anthoceros agrestis HOM05D001988 ORTHO05D004985 2.9e-43 181.0 602 25.4
COL.COLO4_23013 Corchorus olitorius HOM05D001988 ORTHO05D004985 4.9e-43 180.3 662 29.5
Atru.chr11.1786 Acer truncatum HOM05D001988 ORTHO05D004985 3.6e-38 164.1 141 49.6
Hund25529 Selenicereus undatus HOM05D001988 ORTHO05D004985 4.5e-36 157.1 257 35.0
Peaxi162Scf00342g00711 Petunia axillaris HOM05D001988 ORTHO05D004985 1.5e-31 142.1 471 29.9
Medtr4g071850 Medicago truncatula HOM05D001988 ORTHO05D004985 2.1e-30 138.3 202 38.1
Actinidia31897 Actinidia chinensis HOM05D001988 ORTHO05D004985 1.1e-29 136.0 234 35.5
Aqoxy5G02833 Aquilegia oxysepala HOM05D001988 ORTHO05D004985 1.2e-28 132.5 233 32.6
AagrBONN_evm.TU.Sc2ySwM_362.1335 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.5e-26 124.8 559 23.3
Aqoxy5G02832 Aquilegia oxysepala HOM05D001988 ORTHO05D004985 2.5e-26 124.8 264 31.4
PSO513G0179 Papaver somniferum HOM05D001988 ORTHO05D004985 1.0e-24 119.4 439 24.4
SMO239G0039 Selaginella moellendorffii HOM05D001988 ORTHO05D004985 3.9e-24 117.5 147 43.5
CARHR212720 Cardamine hirsuta HOM05D001988 ORTHO05D004985 2.0e-20 105.1 291 28.5
RcHm_v2.0_Chr7g0220011 Rosa chinensis HOM05D001988 ORTHO05D004985 4.5e-20 104.0 81 64.2
RcHm_v2.0_Chr5g0048631 Rosa chinensis HOM05D001988 ORTHO05D004985 7.6e-20 103.2 81 64.2
CARHR145380 Cardamine hirsuta HOM05D001988 ORTHO05D004985 4.9e-19 100.5 191 33.0
Aqoxy5G02834 Aquilegia oxysepala HOM05D001988 ORTHO05D004985 6.0e-17 93.6 91 49.5
Peaxi162Scf00342g00712 Petunia axillaris HOM05D001988 ORTHO05D004985 2.8e-14 84.7 164 36.6
AagrBONN_evm.TU.Sc2ySwM_117.2968 Anthoceros agrestis HOM05D001988 ORTHO05D004985 8.2e-14 83.2 203 27.6
AT1G42615 Arabidopsis thaliana HOM05D001988 ORTHO05D004985 5.9e-12 77.0 149 30.9
CDE06G2098 Ceratophyllum demersum HOM05D001988 ORTHO05D004985 5.5e-10 70.5 97 35.1
AagrBONN_evm.TU.Sc2ySwM_369.75 Anthoceros agrestis HOM05D001988 ORTHO05D004985 2.1e-09 68.6 321 23.7
CARHR289080 Cardamine hirsuta HOM05D001988 ORTHO05D004985 4.3e-07 60.8 64 51.6
AL7G47160 Arabidopsis lyrata HOM05D001988 ORTHO05D004985 2.2e-06 58.5 123 33.3
MCO03G550 Micromonas commoda HOM05D001988 ORTHO05D004985 4.8e-06 57.4 153 27.5


User provided reference genes

Program Settings