Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16292 Utricularia gibba HOM05D003639 ORTHO05D004246 2.2e-190 669.5 534 100.0
unitig_44.g31550 Utricularia gibba HOM05D003639 ORTHO05D004246 6.0e-172 608.2 574 78.7
PGSC0003DMG400012703 Solanum tuberosum HOM05D003639 ORTHO05D004246 1.6e-116 424.1 481 79.8
Solyc04g016510.3 Solanum lycopersicum HOM05D003639 ORTHO05D004246 4.4e-114 416.0 582 68.9
Sopen04g008580 Solanum pennellii HOM05D003639 ORTHO05D004246 7.4e-114 415.2 582 68.7
Peaxi162Scf00130g00929 Petunia axillaris HOM05D003639 ORTHO05D004246 7.0e-112 408.7 479 79.3
Cpa.g.sc120.6 Carica papaya HOM05D003639 ORTHO05D004246 5.3e-104 382.5 540 67.2
SGA_v2.0_scaffold296G47577 Striga asiatica HOM05D003639 ORTHO05D004246 3.5e-103 379.8 472 76.7
MSTRG.6401 Avicennia marina HOM05D003639 ORTHO05D004246 2.2e-102 377.1 300 78.3
CAN.G1237.4 Capsicum annuum HOM05D003639 ORTHO05D004246 5.0e-102 375.9 581 66.1
Nitab4.5_0001618g0260 Nicotiana tabacum HOM05D003639 ORTHO05D004246 8.5e-102 375.2 474 76.4
CSS0048368 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 4.2e-101 372.9 479 72.0
SalBow6G0945 Salvia bowleyana HOM05D003639 ORTHO05D004246 3.6e-100 369.8 574 67.4
Nitab4.5_0000826g0140 Nicotiana tabacum HOM05D003639 ORTHO05D004246 4.7e-100 369.4 483 75.2
Oeu023136.1 Olea europaea HOM05D003639 ORTHO05D004246 3.4e-98 363.2 301 76.4
SGA_v2.0_scaffold69G23129 Striga asiatica HOM05D003639 ORTHO05D004246 3.4e-98 363.2 470 58.3
Actinidia39194 Actinidia chinensis HOM05D003639 ORTHO05D004246 9.8e-98 361.7 466 74.9
Hma1.2p1_0338F.1_g129500 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 1.8e-96 357.5 456 75.4
Medtr3g045130 Medicago truncatula HOM05D003639 ORTHO05D004246 2.4e-96 357.1 434 69.1
Hma1.2p1_2162F.1_g315680 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 3.1e-96 356.7 580 65.2
CSS0037940 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 1.2e-95 354.8 479 53.9
Rhsim03G0032000 Rhododendron simsii HOM05D003639 ORTHO05D004246 1.6e-95 354.4 297 74.7
arahy.Tifrunner.gnm1.ann1.6W6BYV Arachis hypogaea HOM05D003639 ORTHO05D004246 3.5e-95 353.2 466 76.0
COL.COLO4_24957 Corchorus olitorius HOM05D003639 ORTHO05D004246 3.5e-95 353.2 436 75.7
TAR369G0628 Trochodendron aralioides HOM05D003639 ORTHO05D004246 3.5e-95 353.2 307 74.3
Migut.J01707 Erythranthe guttata HOM05D003639 ORTHO05D004246 4.5e-95 352.8 406 61.6
VMungo0720G2842 Vigna mungo HOM05D003639 ORTHO05D004246 4.5e-95 352.8 475 74.1
arahy.Tifrunner.gnm1.ann1.Y8CJQK Arachis hypogaea HOM05D003639 ORTHO05D004246 1.7e-94 350.9 466 75.5
ClCG08G008940 Citrullus lanatus HOM05D003639 ORTHO05D004246 1.7e-94 350.9 480 69.8
Phvul.007G249600 Phaseolus vulgaris HOM05D003639 ORTHO05D004246 3.8e-94 349.7 468 72.9
PGR004G0521 Punica granatum HOM05D003639 ORTHO05D004246 3.8e-94 349.7 473 68.1
Prupe.7G050300 Prunus persica HOM05D003639 ORTHO05D004246 2.5e-93 347.1 477 71.9
Gohir.D12G015400 Gossypium hirsutum HOM05D003639 ORTHO05D004246 2.8e-92 343.6 305 76.7
Lsat_1_v5_gn_4_41600 Lactuca sativa HOM05D003639 ORTHO05D004246 3.6e-92 343.2 475 71.6
MELO3C026433.2 Cucumis melo HOM05D003639 ORTHO05D004246 1.4e-91 341.3 571 60.8
Glyma.10G000800 Glycine max HOM05D003639 ORTHO05D004246 1.4e-91 341.3 466 74.7
Aqoxy3G00063 Aquilegia oxysepala HOM05D003639 ORTHO05D004246 2.3e-91 340.5 479 72.2
Glyma.02G190600 Glycine max HOM05D003639 ORTHO05D004246 2.3e-91 340.5 400 60.5
TWI74G0834 Tripterygium wilfordii HOM05D003639 ORTHO05D004246 2.3e-91 340.5 304 72.0
Haze_19749 Corylus avellana HOM05D003639 ORTHO05D004246 4.0e-91 339.7 308 62.3
CsaV3_6G036200 Cucumis sativus L. HOM05D003639 ORTHO05D004246 4.0e-91 339.7 541 63.0
AUR62024528 Chenopodium quinoa HOM05D003639 ORTHO05D004246 6.8e-91 339.0 524 65.5
Ca_25791_v3 Cicer arietinum L. HOM05D003639 ORTHO05D004246 8.9e-91 338.6 306 71.6
Lalb_Chr21g0305241 Lupinus albus HOM05D003639 ORTHO05D004246 1.2e-90 338.2 294 73.5
Hund19126 Selenicereus undatus HOM05D003639 ORTHO05D004246 3.4e-90 336.7 475 72.6
ECA234G2577 Erigeron canadensis HOM05D003639 ORTHO05D004246 7.5e-90 335.5 470 71.5
Nn7g37752 Nelumbo nucifera HOM05D003639 ORTHO05D004246 7.5e-90 335.5 479 72.2
Gorai.008G015500 Gossypium raimondii HOM05D003639 ORTHO05D004246 1.7e-89 334.3 386 63.2
Peaxi162Scf00177g10117 Petunia axillaris HOM05D003639 ORTHO05D004246 2.8e-89 333.6 260 70.0
Gohir.A12G015000 Gossypium hirsutum HOM05D003639 ORTHO05D004246 4.9e-89 332.8 392 63.3
CANSAT80G2101 Cannabis sativa HOM05D003639 ORTHO05D004246 8.3e-89 332.0 308 74.4
Psat6g009840 Pisum sativum HOM05D003639 ORTHO05D004246 8.3e-89 332.0 306 70.6
Dinv30299 Davidia involucrata HOM05D003639 ORTHO05D004246 1.1e-88 331.6 575 65.0
Duzib132G0222 Durio zibethinus HOM05D003639 ORTHO05D004246 1.1e-88 331.6 401 58.6
TPR.G10246 Trifolium pratense HOM05D003639 ORTHO05D004246 1.1e-88 331.6 302 71.9
Lj5g0008946 Lotus japonicus HOM05D003639 ORTHO05D004246 1.8e-88 330.9 396 58.6
Thecc.02G139000 Theobroma cacao HOM05D003639 ORTHO05D004246 2.4e-88 330.5 401 58.4
AUR62026120 Chenopodium quinoa HOM05D003639 ORTHO05D004246 3.1e-88 330.1 300 70.7
THA.LOC104824426 Tarenaya hassleriana HOM05D003639 ORTHO05D004246 3.1e-88 330.1 486 66.9
Duzib248G1450 Durio zibethinus HOM05D003639 ORTHO05D004246 4.1e-88 329.7 402 59.0
MD12G1086300 Malus domestica HOM05D003639 ORTHO05D004246 7.0e-88 328.9 477 71.3
TPR.G1512 Trifolium pratense HOM05D003639 ORTHO05D004246 9.2e-88 328.6 306 70.9
Manes.09G015900 Manihot esculenta HOM05D003639 ORTHO05D004246 1.6e-87 327.8 299 71.6
DCAR_014011 Daucus carota HOM05D003639 ORTHO05D004246 5.9e-87 325.9 299 69.9
Sc19g0008460 Simmondsia chinensis HOM05D003639 ORTHO05D004246 5.9e-87 325.9 480 71.0
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 1.3e-86 324.7 473 70.8
EL10Ac3g07157 Beta vulgaris HOM05D003639 ORTHO05D004246 2.3e-86 323.9 297 70.0
A04p31660 Brassica napus HOM05D003639 ORTHO05D004246 1.9e-85 320.9 442 70.4
C04p69090 Brassica napus HOM05D003639 ORTHO05D004246 1.9e-85 320.9 442 70.4
BolC4t28406H Brassica oleracea HOM05D003639 ORTHO05D004246 1.9e-85 320.9 442 70.4
BraA04t18624Z Brassica rapa HOM05D003639 ORTHO05D004246 1.9e-85 320.9 442 70.4
CANSAT80G0359 Cannabis sativa HOM05D003639 ORTHO05D004246 2.5e-85 320.5 308 73.4
QL07p005224 Quercus lobata HOM05D003639 ORTHO05D004246 3.6e-84 316.6 410 55.1
Hma1.2p1_1333F.1_g276240 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 1.4e-83 314.7 456 72.1
Carub.0004s0611 Capsella rubella HOM05D003639 ORTHO05D004246 1.8e-83 314.3 442 69.2
Ah.13g076790 Amaranthus hybridus HOM05D003639 ORTHO05D004246 4.0e-83 313.2 586 47.8
Thhalv10000860m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 5.2e-83 312.8 472 65.5
CARHR136620 Cardamine hirsuta HOM05D003639 ORTHO05D004246 1.2e-82 311.6 442 69.5
AT2G41500 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 5.8e-82 309.3 442 68.8
Ciclev10006458m.g Citrus clementina HOM05D003639 ORTHO05D004246 9.8e-82 308.5 408 56.9
AL4G39590 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 1.3e-81 308.1 442 68.1
HPP92_010189 Vanilla planifolia HOM05D003639 ORTHO05D004246 1.3e-81 308.1 480 66.0
Sed0002463 Sechium edule HOM05D003639 ORTHO05D004246 1.7e-81 307.8 445 72.6
Eucgr.A02297 Eucalyptus grandis HOM05D003639 ORTHO05D004246 2.2e-81 307.4 302 68.5
Thhalv10016457m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 2.2e-81 307.4 478 64.4
Sp4g23770 Schrenkiella parvula HOM05D003639 ORTHO05D004246 2.2e-81 307.4 442 68.3
CiPaw.09G042100 Carya illinoinensis HOM05D003639 ORTHO05D004246 2.4e-80 303.9 573 61.1
HPP92_010210 Vanilla planifolia HOM05D000527 ORTHO05D000559 3.2e-80 303.5 481 65.5
CDE04G0356 Ceratophyllum demersum HOM05D003639 ORTHO05D004246 1.2e-79 301.6 471 67.5
A05p02320 Brassica napus HOM05D003639 ORTHO05D004246 1.6e-79 301.2 474 64.3
C04p02760 Brassica napus HOM05D003639 ORTHO05D004246 2.7e-79 300.4 476 64.3
BolC4t21916H Brassica oleracea HOM05D003639 ORTHO05D004246 6.0e-79 299.3 442 67.6
SEGI_17823 Sequoiadendron giganteum HOM05D003639 ORTHO05D004246 1.7e-78 297.7 311 64.0
Potri.006G045800 Populus trichocarpa HOM05D003639 ORTHO05D004246 2.3e-78 297.4 404 56.7
BraA05t19227Z Brassica rapa HOM05D003639 ORTHO05D004246 5.0e-78 296.2 474 63.7
Medtr5g022690 Medicago truncatula HOM05D003639 ORTHO05D004246 8.6e-78 295.4 312 60.3
PSO832G3057 Papaver somniferum HOM05D003639 ORTHO05D004246 8.6e-78 295.4 266 62.0
Aa31LG1G23520 Aethionema arabicum HOM05D003639 ORTHO05D004246 9.5e-77 292.0 304 64.5
PSO063G3048 Papaver somniferum HOM05D003639 ORTHO05D004246 9.5e-77 292.0 255 63.9
ATR0665G145 Amborella trichopoda HOM05D003639 ORTHO05D004246 2.3e-75 287.3 324 60.8
FAN02G3905 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.4e-74 283.5 505 63.6
FAN09G0054 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.7e-73 280.0 469 69.1
Lj4C34T1 Lonicera japonica HOM05D003639 ORTHO05D004246 6.4e-73 279.3 320 56.2
FAN14G4828 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.2e-72 276.9 503 65.8
FvH4_6g24750 Fragaria vesca HOM05D003639 ORTHO05D004246 4.6e-71 273.1 288 57.3
FAN05G0107 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.5e-69 268.1 251 61.0
Os03g0355200 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 9.5e-69 265.4 293 61.8
Os03g0355400 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 9.5e-69 265.4 293 61.8
BcaC02g12784 Brassica carinata HOM05D003639 ORTHO05D004246 2.1e-68 264.2 476 61.8
Atru.chr1.1191 Acer truncatum HOM05D003639 ORTHO05D004246 6.8e-67 259.2 282 57.1
TAR065G0005 Trochodendron aralioides HOM05D003639 ORTHO05D004246 9.9e-66 255.4 372 56.5
BcaNung06794 Brassica carinata HOM05D003639 ORTHO05D004246 2.2e-65 254.2 300 59.7
Mapoly0061s0123 Marchantia polymorpha HOM05D003639 ORTHO05D004246 2.2e-65 254.2 468 58.3
RcHm_v2.0_Chr3g0484331 Rosa chinensis HOM05D003639 ORTHO05D004246 1.1e-64 251.9 232 60.8
AagrBONN_evm.TU.Sc2ySwM_117.1154 Anthoceros agrestis HOM05D003639 ORTHO05D004246 3.5e-63 246.9 452 56.0
Cc06_g18350 Coffea canephora HOM05D003639 ORTHO05D004246 6.6e-62 242.7 386 75.9
Pp3c9_11970 Physcomitrium patens HOM05D003639 ORTHO05D004246 1.5e-61 241.5 371 44.5
GSVIVG01033551001 Vitis vinifera HOM05D003639 ORTHO05D004246 4.3e-61 240.0 386 74.6
CBR_g723 Chara braunii HOM05D003639 ORTHO05D004246 1.2e-58 231.9 221 57.0
Potri.016G042250 Populus trichocarpa HOM05D003639 ORTHO05D004246 3.4e-58 230.3 564 35.1
Zm00001eb017050 Zea mays HOM05D003639 ORTHO05D004246 6.4e-57 226.1 191 62.8
Sabra06G0031300 Salix brachista HOM05D003639 ORTHO05D004246 5.6e-53 213.0 308 55.8
VMungo0540G1675 Vigna mungo HOM05D003639 ORTHO05D004246 1.6e-52 211.5 184 59.8
SMO356G0612 Selaginella moellendorffii HOM05D003639 ORTHO05D004246 9.0e-51 205.7 228 51.8
MD14G1080500 Malus domestica HOM05D003639 ORTHO05D004246 1.2e-50 205.3 194 56.2
Mapoly0014s0154 Marchantia polymorpha HOM05D003639 ORTHO05D004246 1.5e-50 204.9 265 47.2
Psat6g118240 Pisum sativum HOM05D003639 ORTHO05D004246 7.1e-48 196.1 254 60.2
Sed0000547 Sechium edule HOM05D003639 ORTHO05D004246 1.2e-47 195.3 157 66.2
MELO3C019779.2 Cucumis melo HOM05D003639 ORTHO05D004246 5.1e-46 189.9 373 46.1
FAN19G1783 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.6e-42 177.6 158 65.2
FAN10G2664 Fragaria x ananassa HOM05D003639 ORTHO05D004246 7.6e-42 176.0 194 57.2
FAN14G5922 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.9e-42 175.6 194 57.2
FAN17G3014 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.9e-42 175.6 194 57.2
FAN24G0290 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.3e-41 175.3 194 57.2
FAN13G2401 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.2e-41 174.5 171 60.8
FAN03G0195 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.9e-41 174.1 194 56.7
FAN23G2202 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.9e-41 174.1 194 56.7
FAN07G1748 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.8e-41 173.7 194 56.7
FAN01G0512 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.1e-40 172.2 194 56.7
FAN06G0994 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.1e-40 172.2 194 56.2
FAN28G1931 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.4e-40 169.9 194 55.7
FAN22G1757 Fragaria x ananassa HOM05D003639 ORTHO05D004246 7.1e-40 169.5 194 55.7
FAN09G4382 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.1e-39 167.9 155 63.9
FAN27G3180 Fragaria x ananassa HOM05D003639 ORTHO05D004246 7.9e-39 166.0 194 55.2
BcaB06g29187 Brassica carinata HOM05D003639 ORTHO05D004246 1.5e-37 161.8 187 63.1
BcaNung04072 Brassica carinata HOM05D003639 ORTHO05D004246 1.8e-35 154.8 158 53.2
FAN16G0989 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.8e-35 154.8 194 53.1
vmacro21947 Vaccinium macrocarpon HOM05D003639 ORTHO05D004246 3.8e-33 147.1 298 41.9
MCO12G002 Micromonas commoda HOM05D003639 ORTHO05D004246 1.9e-32 144.8 438 47.9
RcHm_v2.0_Chr3g0484501 Rosa chinensis HOM05D003639 ORTHO05D004246 1.9e-32 144.8 262 36.6
BolC5t34692H Brassica oleracea HOM05D003639 ORTHO05D004246 2.7e-31 141.0 149 57.0
Medtr0012s0110 Medicago truncatula HOM05D003639 ORTHO05D004246 2.5e-29 134.4 185 50.3
FAN25G1774 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.7e-29 133.3 194 48.5
FAN17G0086 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.1e-27 129.0 157 54.8
AT2G05720 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 4.0e-27 127.1 327 37.9
Atru.chr6.1378 Acer truncatum HOM05D003639 ORTHO05D004246 1.0e-25 122.5 189 46.6
Atru.chr6.1379 Acer truncatum HOM05D003639 ORTHO05D004246 6.5e-25 119.8 77 74.0
RcHm_v2.0_Chr3g0484401 Rosa chinensis HOM05D003639 ORTHO05D004246 5.5e-24 116.7 106 58.5
AL3G43260 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 2.3e-22 111.3 264 60.2
Cfa024100 Carpinus fangiana HOM05D003639 ORTHO05D004246 7.7e-18 96.3 234 31.6
Psat4g106880 Pisum sativum HOM05D003639 ORTHO05D004246 1.4e-16 92.0 117 50.4
Cre16.g662800 Chlamydomonas reinhardtii HOM05D003639 ORTHO05D004246 4.6e-15 87.0 127 40.2
COL.COLO4_13929 Corchorus olitorius HOM05D003639 ORTHO05D004246 6.1e-15 86.7 51 70.6
PRCOL_00003365 Prasinoderma coloniale HOM05D003639 ORTHO05D004246 6.1e-15 86.7 190 38.4
MELO3C019777.2 Cucumis melo HOM05D003639 ORTHO05D004246 1.7e-12 78.6 137 42.3
QL04p089213 Quercus lobata HOM05D003639 ORTHO05D004246 4.8e-12 77.0 202 36.1
Atru.chr6.1380 Acer truncatum HOM05D003639 ORTHO05D004246 1.1e-11 75.9 236 54.2
Atru.chr1.1192 Acer truncatum HOM05D003639 ORTHO05D004246 1.2e-10 72.4 235 74.0
TPR.G1899 Trifolium pratense HOM05D003639 ORTHO05D004246 5.9e-10 70.1 37 78.4


User provided reference genes

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