Gene: ClCG08G008940

General Information

Structural Information

  • Species Citrullus lanatus
  • Gene Identifier ClCG08G008940
  • Transcript Identifier ClCG08G008940.1
  • Gene Type Coding gene
  • Location CG_Chr08 : 21473022-21477897 : negative

Gene Family Information

  • ID HOM05D003639
  • #Genes/#Species 188/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid ClCG08G008940.1
  • name maker-CGscf_0026-augustus-gene-0.457
  • name maker-CGscf_0026-augustus-gene-0.457-mRNA-1

Descriptions

  • Description U4/U6 small nuclear ribonucleoprotein Prp4, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009560
ISO
PLAZA Integrative Orthologyembryo sac egg cell differentiation AT2G41500
GO:0007267
ISO
PLAZA Integrative Orthologycell-cell signaling AT2G41500
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT2G41500
GO:0001709
ISO
PLAZA Integrative Orthologycell fate determination AT2G41500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT2G41500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014906 Pre-mRNA processing factor 4 (PRP4)-like
IPR020472 G-protein beta WD-40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
IPR036285 PRP4-like superfamily
Mapman id Description
16.2.1.3.2 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).protein factor (PRPF4)