Gene: RcHm_v2.0_Chr3g0484331

General Information

Structural Information

Species Rosa chinensis
Gene Identifier RcHm_v2.0_Chr3g0484331
Transcript Identifier RcHm_v2.0_Chr3g0484331
Gene Type Coding gene
Location RcHm_v2.0_Chr3 : 30712970-30716552 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003639
#Genes/#Species 188/99
Phylogenetic origin

ID ORTHO05D004246
#Genes/#Species 186/99
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009560	ISO	PLAZA Integrative Orthology	embryo sac egg cell differentiation	AT2G41500
GO:0007267	ISO	PLAZA Integrative Orthology	cell-cell signaling	AT2G41500
GO:0009553	ISO	PLAZA Integrative Orthology	embryo sac development	AT2G41500
GO:0001709	ISO	PLAZA Integrative Orthology	cell fate determination	AT2G41500

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016607	ISO	PLAZA Integrative Orthology	nuclear speck	AT2G41500

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036285	PRP4-like superfamily
IPR001680	WD40 repeat
IPR020472	G-protein beta WD-40 repeat
IPR001632	G-protein, beta subunit
IPR015943	WD40/YVTN repeat-like-containing domain superfamily
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like
IPR036322	WD40-repeat-containing domain superfamily

Mapman id	Description
16.2.1.3.2	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).protein factor (PRPF4)