Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_4.g30344 Utricularia gibba HOM05D000822 ORTHO05D018169 1.0e-193 679.9 331 100.0
unitig_748.g8226 Utricularia gibba HOM05D000822 ORTHO05D018169 2.9e-193 678.3 331 99.7
MSTRG.11622 Avicennia marina HOM05D000822 ORTHO05D004949 4.2e-115 418.7 323 63.5
Migut.A00048 Erythranthe guttata HOM05D000822 ORTHO05D004949 8.1e-111 404.4 330 60.3
Peaxi162Scf00073g01420 Petunia axillaris HOM05D000822 ORTHO05D004949 9.0e-110 401.0 325 57.5
SalBow4G2024 Salvia bowleyana HOM05D000822 ORTHO05D004949 6.5e-108 394.8 319 58.6
Lj8A715T56 Lonicera japonica HOM05D000822 ORTHO05D004949 1.5e-104 383.6 327 57.8
vmacro11165 Vaccinium macrocarpon HOM05D000822 ORTHO05D004949 2.5e-104 382.9 327 58.1
CSS0022636 Camellia sinensis var. sinensis HOM05D000822 ORTHO05D004949 3.3e-104 382.5 330 57.9
SGA_v2.0_scaffold64G21918 Striga asiatica HOM05D000822 ORTHO05D004949 5.7e-104 381.7 314 57.6
PGSC0003DMG400023601 Solanum tuberosum HOM05D000822 ORTHO05D004949 7.4e-104 381.3 325 55.7
Lj8A695T68 Lonicera japonica HOM05D000822 ORTHO05D004949 1.6e-103 380.2 327 57.8
Nitab4.5_0005011g0040 Nicotiana tabacum HOM05D000822 ORTHO05D004949 1.1e-102 377.5 325 55.4
Solyc04g014870.3 Solanum lycopersicum HOM05D000822 ORTHO05D004949 4.1e-102 375.6 325 55.4
Rhsim02G0199900 Rhododendron simsii HOM05D000822 ORTHO05D004949 1.5e-101 373.6 313 58.1
CAN.G1263.25 Capsicum annuum HOM05D000822 ORTHO05D004949 2.0e-101 373.2 325 55.1
Lj7A721T54 Lonicera japonica HOM05D000822 ORTHO05D004949 2.6e-101 372.9 323 55.1
Actinidia25858 Actinidia chinensis HOM05D000822 ORTHO05D004949 4.5e-101 372.1 322 55.9
Rhsim03G0035600 Rhododendron simsii HOM05D000822 ORTHO05D004949 7.6e-101 371.3 313 57.2
CSS0023602 Camellia sinensis var. sinensis HOM05D000822 ORTHO05D004949 1.0e-100 370.9 313 58.8
vmacro14477 Vaccinium macrocarpon HOM05D000822 ORTHO05D004949 1.3e-100 370.5 304 58.9
Sopen04g007000 Solanum pennellii HOM05D000822 ORTHO05D004949 1.7e-100 370.2 325 54.5
vmacro11160 Vaccinium macrocarpon HOM05D000822 ORTHO05D004949 2.2e-100 369.8 313 58.1
Sabra06G0198000 Salix brachista HOM05D000822 ORTHO05D004949 7.7e-93 344.7 324 51.9
Duzib168G0655 Durio zibethinus HOM05D000822 ORTHO05D004949 1.0e-92 344.4 324 52.8
Haze_21526 Corylus avellana HOM05D000822 ORTHO05D004949 1.3e-92 344.0 296 54.1
Potri.006G253500 Populus trichocarpa HOM05D000822 ORTHO05D004949 1.7e-92 343.6 316 52.2
Potri.018G028100 Populus trichocarpa HOM05D000822 ORTHO05D004949 5.0e-92 342.0 317 52.7
Prupe.1G480300 Prunus persica HOM05D000822 ORTHO05D004949 5.0e-92 342.0 324 52.5
Thecc.09G026000 Theobroma cacao HOM05D000822 ORTHO05D004949 5.0e-92 342.0 318 53.1
Actinidia22350 Actinidia chinensis HOM05D000822 ORTHO05D004949 1.1e-91 340.9 288 57.6
Cfa013155 Carpinus fangiana HOM05D000822 ORTHO05D004949 2.5e-91 339.7 288 54.9
Lsat_1_v5_gn_1_44761 Lactuca sativa HOM05D000822 ORTHO05D004949 2.5e-91 339.7 325 51.1
TAR645G0002 Trochodendron aralioides HOM05D000822 ORTHO05D004949 3.2e-91 339.3 314 54.5
HanXRQChr03g0088731 Helianthus annuus HOM05D000822 ORTHO05D004949 7.2e-91 338.2 329 51.1
TAR383G0596 Trochodendron aralioides HOM05D000822 ORTHO05D004949 1.2e-90 337.4 324 51.2
EL10Ac2g04235 Beta vulgaris HOM05D000822 ORTHO05D004949 2.7e-90 336.3 332 51.5
COL.COLO4_18849 Corchorus olitorius HOM05D000822 ORTHO05D004949 2.7e-90 336.3 316 54.1
Gohir.D05G056700 Gossypium hirsutum HOM05D000822 ORTHO05D004949 2.7e-90 336.3 314 52.9
Sc23g0006810 Simmondsia chinensis HOM05D000822 ORTHO05D004949 7.9e-90 334.7 307 54.7
Sc23g0006820 Simmondsia chinensis HOM05D000822 ORTHO05D004949 1.0e-89 334.3 317 53.3
Gorai.009G057700 Gossypium raimondii HOM05D000822 ORTHO05D004949 2.3e-89 333.2 313 52.7
Manes.16G121400 Manihot esculenta HOM05D000822 ORTHO05D004949 3.0e-89 332.8 316 52.5
TWI34G0044 Tripterygium wilfordii HOM05D000822 ORTHO05D004949 3.9e-89 332.4 314 53.8
Sabra18G0030300 Salix brachista HOM05D000822 ORTHO05D004949 5.1e-89 332.0 324 50.0
PGSC0003DMG400030858 Solanum tuberosum HOM05D000822 ORTHO05D004949 8.8e-89 331.3 313 53.0
AUR62031504 Chenopodium quinoa HOM05D000822 ORTHO05D004949 1.1e-88 330.9 325 51.4
Ah.16g104370 Amaranthus hybridus HOM05D000822 ORTHO05D004949 1.5e-88 330.5 299 53.8
PGR044G1864 Punica granatum HOM05D000822 ORTHO05D004949 3.3e-88 329.3 296 54.7
Sopen08g024460 Solanum pennellii HOM05D000822 ORTHO05D004949 3.3e-88 329.3 313 52.7
TWI18G0740 Tripterygium wilfordii HOM05D000822 ORTHO05D004949 4.3e-88 328.9 328 51.2
RcHm_v2.0_Chr4g0412141 Rosa chinensis HOM05D000822 ORTHO05D004949 5.7e-88 328.6 324 50.6
MBI01_g15672_MAGBIO Magnolia biondii HOM05D000822 ORTHO05D004949 9.7e-88 327.8 315 51.1
DCAR_003090 Daucus carota HOM05D000822 ORTHO05D004949 1.3e-87 327.4 315 51.7
Eucgr.C02780 Eucalyptus grandis HOM05D000822 ORTHO05D004949 1.3e-87 327.4 306 51.0
vmacro23460 Vaccinium macrocarpon HOM05D000822 ORTHO05D004949 1.3e-87 327.4 304 54.9
Gohir.A05G054300 Gossypium hirsutum HOM05D000822 ORTHO05D004949 1.7e-87 327.0 318 52.2
Solyc08g075820.4 Solanum lycopersicum HOM05D000822 ORTHO05D004949 2.8e-87 326.2 313 52.4
AUR62012402 Chenopodium quinoa HOM05D000822 ORTHO05D004949 6.3e-87 325.1 325 51.1
DCAR_031550 Daucus carota HOM05D000822 ORTHO05D004949 6.3e-87 325.1 324 51.2
Glyma.06G068900 Glycine max HOM05D000822 ORTHO05D004949 6.3e-87 325.1 314 50.6
Nn2g12036 Nelumbo nucifera HOM05D000822 ORTHO05D004949 6.3e-87 325.1 314 49.7
VMungo1309G0438 Vigna mungo HOM05D000822 ORTHO05D004949 1.5e-85 320.5 314 49.0
Phvul.009G093700 Phaseolus vulgaris HOM05D000822 ORTHO05D004949 3.4e-85 319.3 324 48.5
Hund04534 Selenicereus undatus HOM05D000822 ORTHO05D004949 3.4e-85 319.3 314 51.0
QL02p021874 Quercus lobata HOM05D000822 ORTHO05D004949 5.9e-85 318.5 325 49.2
ECA248G3419 Erigeron canadensis HOM05D000822 ORTHO05D004949 1.0e-84 317.8 312 50.3
MELO3C011257.2 Cucumis melo HOM05D000315 ORTHO05D004949 2.9e-84 316.2 314 50.3
Glyma.04G067300 Glycine max HOM05D000822 ORTHO05D004949 2.9e-84 316.2 314 49.7
Sed0009705 Sechium edule HOM05D000822 ORTHO05D004949 6.5e-84 315.1 324 49.7
AL5G29290 Arabidopsis lyrata HOM05D000822 ORTHO05D004949 1.4e-83 313.9 296 51.7
ClCG08G013320 Citrullus lanatus HOM05D000822 ORTHO05D004949 1.9e-83 313.5 314 50.6
Aa31LG4G18010 Aethionema arabicum HOM05D000822 ORTHO05D004949 4.2e-83 312.4 288 51.4
CiPaw.07G222400 Carya illinoinensis HOM05D000822 ORTHO05D004949 5.5e-83 312.0 319 48.3
CsaV3_2G032040 Cucumis sativus L. HOM05D000822 ORTHO05D004949 5.5e-83 312.0 314 49.7
MD15G1124800 Malus domestica HOM05D000822 ORTHO05D004949 7.2e-83 311.6 324 48.5
PSO455G0184 Papaver somniferum HOM05D000822 ORTHO05D004949 1.2e-82 310.8 330 46.4
BcaB05g23125 Brassica carinata HOM05D000822 ORTHO05D004949 2.1e-82 310.1 296 51.0
CANSAT21G1716 Cannabis sativa HOM05D000822 ORTHO05D004949 2.7e-82 309.7 330 47.3
FAN15G3685 Fragaria x ananassa HOM05D000822 ORTHO05D004949 2.7e-82 309.7 324 48.5
FAN20G0430 Fragaria x ananassa HOM05D000822 ORTHO05D004949 2.7e-82 309.7 324 48.5
Carub.0005s1583 Capsella rubella HOM05D000822 ORTHO05D004949 7.9e-82 308.1 296 51.0
FvH4_2g29170 Fragaria vesca HOM05D000822 ORTHO05D004949 7.9e-82 308.1 313 49.5
FAN24G1467 Fragaria x ananassa HOM05D000822 ORTHO05D004949 7.9e-82 308.1 313 49.5
Aqoxy7G03700 Aquilegia oxysepala HOM05D000822 ORTHO05D004949 1.0e-81 307.8 313 47.0
Lj1g0024027 Lotus japonicus HOM05D000822 ORTHO05D004949 1.4e-81 307.4 309 49.2
BcaC02g09911 Brassica carinata HOM05D000822 ORTHO05D004949 3.9e-81 305.8 296 50.3
C04p35280 Brassica napus HOM05D000822 ORTHO05D004949 3.9e-81 305.8 296 50.3
BolC4t25082H Brassica oleracea HOM05D000822 ORTHO05D004949 3.9e-81 305.8 296 50.3
Sp5g12590 Schrenkiella parvula HOM05D000822 ORTHO05D004949 5.1e-81 305.4 296 50.0
A01p24710 Brassica napus HOM05D000822 ORTHO05D004949 6.7e-81 305.1 296 50.3
BraA01t02383Z Brassica rapa HOM05D000822 ORTHO05D004949 6.7e-81 305.1 296 50.3
BcaC09g49954 Brassica carinata HOM05D000822 ORTHO05D004949 8.8e-81 304.7 296 50.3
C01p30830 Brassica napus HOM05D000822 ORTHO05D004949 8.8e-81 304.7 296 50.3
BolC1t03015H Brassica oleracea HOM05D000822 ORTHO05D004949 8.8e-81 304.7 296 50.3
CARHR158500 Cardamine hirsuta HOM05D000822 ORTHO05D004949 8.8e-81 304.7 296 50.0
THA.LOC104807527 Tarenaya hassleriana HOM05D000822 ORTHO05D004949 8.8e-81 304.7 296 50.7
Lalb_Chr23g0268561 Lupinus albus HOM05D000822 ORTHO05D004949 2.6e-80 303.1 296 50.3
ECA233G2786 Erigeron canadensis HOM05D000822 ORTHO05D004949 4.4e-80 302.4 316 47.5
THA.LOC104807524 Tarenaya hassleriana HOM05D000822 ORTHO05D004949 5.7e-80 302.0 296 50.7
HanXRQChr06g0181241 Helianthus annuus HOM05D000822 ORTHO05D004949 9.7e-80 301.2 300 50.3
AT3G49500 Arabidopsis thaliana HOM05D000822 ORTHO05D004949 2.2e-79 300.1 296 49.7
Thhalv10010107m.g Eutrema salsugineum HOM05D000822 ORTHO05D004949 2.8e-79 299.7 296 50.0
Ca_15730_v3 Cicer arietinum L. HOM05D000822 ORTHO05D004949 3.7e-79 299.3 314 48.7
arahy.Tifrunner.gnm1.ann1.CJD9B0 Arachis hypogaea HOM05D000822 ORTHO05D004949 6.3e-79 298.5 324 47.5
TPR.G3138 Trifolium pratense HOM05D000822 ORTHO05D004949 1.1e-78 297.7 309 49.8
arahy.Tifrunner.gnm1.ann1.W9XA7T Arachis hypogaea HOM05D000822 ORTHO05D004949 1.4e-78 297.4 324 47.5
CAN.G1427.13 Capsicum annuum HOM05D000822 ORTHO05D004949 4.1e-78 295.8 325 45.5
Eucgr.C02782 Eucalyptus grandis HOM05D000822 ORTHO05D004949 9.1e-78 294.7 306 49.0
Medtr3g107390 Medicago truncatula HOM05D000822 ORTHO05D004949 9.1e-78 294.7 291 50.9
Nn8g39460 Nelumbo nucifera HOM05D000822 ORTHO05D004949 6.5e-76 288.5 281 52.3
Psat0s2233g0200 Pisum sativum HOM05D000822 ORTHO05D004949 8.5e-76 288.1 308 47.4
Dinv30147 Davidia involucrata HOM05D000822 ORTHO05D004949 1.7e-71 273.9 239 57.7
CDE04G0917 Ceratophyllum demersum HOM05D000822 ORTHO05D004949 5.3e-70 268.9 298 43.3
Os01g0527600 Oryza sativa ssp. japonica HOM05D000822 ORTHO05D004949 2.9e-68 263.1 298 45.3
ATR1120G112 Amborella trichopoda HOM05D000822 ORTHO05D004949 3.2e-67 259.6 328 41.8
CSS0029415 Camellia sinensis var. sinensis HOM05D000822 ORTHO05D004949 1.6e-66 257.3 227 56.4
Zm00001eb132680 Zea mays HOM05D000822 ORTHO05D004949 2.7e-66 256.5 315 43.8
SEGI_34001 Sequoiadendron giganteum HOM05D000822 ORTHO05D004949 1.4e-65 254.2 286 45.5
HPP92_007973 Vanilla planifolia HOM05D000822 ORTHO05D004949 2.3e-65 253.4 303 41.9
SEGI_33211 Sequoiadendron giganteum HOM05D000822 ORTHO05D004949 7.5e-64 248.4 286 43.4
ATR1120G049 Amborella trichopoda HOM05D000822 ORTHO05D004949 4.8e-63 245.7 299 41.5
Eucgr.C02779 Eucalyptus grandis HOM05D000822 ORTHO05D004949 1.4e-62 244.2 288 44.1
SEGI_40615 Sequoiadendron giganteum HOM05D000822 ORTHO05D004949 4.5e-61 239.2 290 42.4
Dinv18248 Davidia involucrata HOM05D000822 ORTHO05D004949 1.9e-59 233.8 204 58.8
SEGI_01501 Sequoiadendron giganteum HOM05D000822 ORTHO05D004949 1.6e-58 230.7 304 42.4
SEGI_30307 Sequoiadendron giganteum HOM05D000822 ORTHO05D004949 1.6e-58 230.7 304 42.4
FAN27G2931 Fragaria x ananassa HOM05D000822 ORTHO05D004949 3.6e-50 203.0 204 51.0
Zm00001eb389110 Zea mays HOM05D000822 ORTHO05D004949 4.0e-41 172.9 322 34.8
Oeu057301.1 Olea europaea HOM05D000822 ORTHO05D004949 1.3e-36 157.9 307 33.9
Cc08_g00760 Coffea canephora HOM05D000822 ORTHO05D004949 9.5e-35 151.8 323 33.4
Atru.chr7.2415 Acer truncatum HOM05D000822 ORTHO05D018169 8.1e-34 148.7 146 50.0
Cpa.g.sc117.8 Carica papaya HOM05D000822 ORTHO05D004949 9.2e-30 135.2 108 58.3
Zm00001eb389620 Zea mays HOM05D000822 ORTHO05D051652 7.8e-29 132.1 170 41.8
GSVIVG01035851001 Vitis vinifera HOM05D000822 ORTHO05D004949 2.3e-28 130.6 107 60.7
AagrBONN_evm.TU.Sc2ySwM_368.304 Anthoceros agrestis HOM05D000822 ORTHO05D004949 2.1e-26 124.0 302 28.8
HanXRQChr01g0030811 Helianthus annuus HOM05D000822 ORTHO05D018169 7.6e-24 115.5 123 43.1
RcHm_v2.0_Chr6g0298021 Rosa chinensis HOM05D000822 ORTHO05D004949 6.4e-23 112.5 170 40.0
Pp3c19_17100 Physcomitrium patens HOM05D000822 ORTHO05D004949 1.9e-22 110.9 288 28.5
AT2G05370 Arabidopsis thaliana HOM05D000822 ORTHO05D018169 6.6e-20 102.4 142 38.7
RcHm_v2.0_Chr7g0220451 Rosa chinensis HOM05D000822 ORTHO05D018169 4.3e-19 99.8 150 36.0
Mapoly0151s0009 Marchantia polymorpha HOM05D000822 ORTHO05D004949 6.9e-17 92.4 288 26.7
FAN27G3339 Fragaria x ananassa HOM05D000822 ORTHO05D018169 7.6e-16 89.0 96 44.8
Zm00001eb389130 Zea mays HOM05D000822 ORTHO05D051652 9.9e-16 88.6 106 42.5
SalBow7G3435 Salvia bowleyana HOM05D000399 ORTHO05D000304 4.2e-14 83.2 55 67.3
CBR_g18917 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-06 56.2 99 32.3


User provided reference genes

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