Gene: CSS0023602
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0023602
- Transcript Identifier CSS0023602.1
- Gene Type Coding gene
- Location Contig1186 : 222030-227069 : positive
Gene Family Information
- ID HOM05D000822
- #Genes/#Species 723/96
- Phylogenetic origin
- ID ORTHO05D004949
- #Genes/#Species 167/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0023602.1
Descriptions
- Description SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0048467 | ISO | PLAZA Integrative Orthology | gynoecium development | AT3G49500 |
GO:0010267 | ISO | PLAZA Integrative Orthology | production of ta-siRNAs involved in RNA interference | AT3G49500 |
GO:0016246 | ISO | PLAZA Integrative Orthology | RNA interference | AT3G49500 |
GO:0030422 | ISO | PLAZA Integrative Orthology | production of siRNA involved in RNA interference | AT3G49500 |
GO:0016441 | ISO | PLAZA Integrative Orthology | posttranscriptional gene silencing | AT3G49500 |
GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT3G49500 |
GO:0031047 | ISO | PLAZA Integrative Orthology | gene silencing by RNA | Solyc08g075820.4 |
GO:0048366 | ISO | PLAZA Integrative Orthology | leaf development | AT3G49500 |
GO:0048544 | ISO | PLAZA Integrative Orthology | recognition of pollen | AT3G49500 |
GO:0009616 | ISO | PLAZA Integrative Orthology | RNAi-mediated antiviral immune response | AT3G49500 |
GO:0048440 | ISO | PLAZA Integrative Orthology | carpel development | AT3G49500 |
GO:0090065 | ISO | PLAZA Integrative Orthology | regulation of production of siRNA involved in RNA interference | Solyc04g014870.3 |
GO:0035196 | ISO | PLAZA Integrative Orthology | production of miRNAs involved in gene silencing by miRNA | AT3G49500 |
GO:0010492 | ISO | PLAZA Integrative Orthology | maintenance of shoot apical meristem identity | Os01g0527600 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003968 | IEA | InterPro | RNA-directed 5'-3' RNA polymerase activity | |
GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G49500 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
16.9.1.1 | RNA processing.mRNA silencing.transacting siRNA pathway.ssRNA polymerase (RDR6) |