Gene: PGR044G1864

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR044G1864
  • Transcript Identifier PGR044G1864.02
  • Gene Type Coding gene
  • Location NC_045134.1 : 7873120-7877629 : positive

Gene Family Information

  • ID HOM05D000822
  • #Genes/#Species 723/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031375059.1
  • name LOC116189514
  • name XM_031519199.1
  • id gene-LOC116189514
  • uniprot A0A218XNZ0

Descriptions

  • product RNA-dependent RNA polymerase 6, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090065
ISO
PLAZA Integrative Orthologyregulation of production of siRNA involved in RNA interference Solyc04g014870.3
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT3G49500
GO:0016246
ISO
PLAZA Integrative OrthologyRNA interference AT3G49500
GO:0030422
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in RNA interference AT3G49500
GO:0016441
ISO
PLAZA Integrative Orthologyposttranscriptional gene silencing AT3G49500
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT3G49500
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT3G49500
GO:0048544
ISO
PLAZA Integrative Orthologyrecognition of pollen AT3G49500
GO:0048467
ISO
PLAZA Integrative Orthologygynoecium development AT3G49500
GO:0009616
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immune response AT3G49500
GO:0048440
ISO
PLAZA Integrative Orthologycarpel development AT3G49500
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT3G49500
GO:0010492
ISO
PLAZA Integrative Orthologymaintenance of shoot apical meristem identity Os01g0527600
GO:0031047
IEA
GOA Databasegene silencing by RNA
GO:0001172
IEA
GOA Databasetranscription, RNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0003968
IEA
GOA DatabaseRNA-directed 5'-3' RNA polymerase activity
GO:0003968
IEA
InterProRNA-directed 5'-3' RNA polymerase activity
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G49500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR007855 RNA-dependent RNA polymerase, eukaryotic-type
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.9.1.1 RNA processing.mRNA silencing.transacting siRNA pathway.ssRNA polymerase (RDR6)