Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_26.g10338 Utricularia gibba HOM05D003353 ORTHO05D003751 0.0e+00 2285.8 1140 100.0
Migut.L01407 Erythranthe guttata HOM05D003353 ORTHO05D003751 3.7e-304 1048.5 1603 41.1
MSTRG.7892 Avicennia marina HOM05D003353 ORTHO05D003751 5.9e-302 1041.2 1707 39.9
SGA_v2.0_scaffold165G38252 Striga asiatica HOM05D003353 ORTHO05D003751 7.7e-294 1014.2 1595 40.8
Oeu056394.4 Olea europaea HOM05D003353 ORTHO05D003751 1.1e-239 834.3 1464 37.8
Cc11_g14600 Coffea canephora HOM05D003353 ORTHO05D003751 6.7e-213 745.3 1501 34.8
Oeu003445.1 Olea europaea HOM05D003353 ORTHO05D003751 8.5e-208 728.4 1176 40.0
CAN.G1420.2 Capsicum annuum HOM05D003353 ORTHO05D003751 7.4e-204 715.3 1427 34.3
Nitab4.5_0002579g0080 Nicotiana tabacum HOM05D003353 ORTHO05D003751 1.0e-200 704.9 1516 33.6
Nitab4.5_0000113g0210 Nicotiana tabacum HOM05D003353 ORTHO05D003751 8.0e-198 695.3 1544 33.1
Dinv15308 Davidia involucrata HOM05D003353 ORTHO05D003751 3.0e-197 693.3 1619 32.4
Peaxi162Scf00338g00002 Petunia axillaris HOM05D003353 ORTHO05D003751 2.0e-196 690.6 1522 32.9
DCAR_031098 Daucus carota HOM05D003353 ORTHO05D003751 7.4e-196 688.7 1503 32.9
Sopen05g001650 Solanum pennellii HOM05D003353 ORTHO05D003751 2.8e-195 686.8 1482 32.5
Rhsim12G0121100 Rhododendron simsii HOM05D003353 ORTHO05D003751 2.6e-193 680.2 1485 33.2
Dinv24865 Davidia involucrata HOM05D003353 ORTHO05D003751 1.9e-191 674.1 1619 31.5
vmacro16257 Vaccinium macrocarpon HOM05D003353 ORTHO05D003751 1.2e-188 664.8 1437 33.3
Manes.12G029600 Manihot esculenta HOM05D003353 ORTHO05D003751 3.8e-184 649.8 1536 31.8
Lj6C805G5 Lonicera japonica HOM05D003353 ORTHO05D003751 8.5e-184 648.7 1391 33.1
TAR371G0580 Trochodendron aralioides HOM05D003353 ORTHO05D003751 2.8e-179 633.6 1656 30.7
TAR629G0276 Trochodendron aralioides HOM05D003353 ORTHO05D003751 6.3e-179 632.5 1658 30.3
Nn3g16906 Nelumbo nucifera HOM05D003353 ORTHO05D003751 3.8e-176 623.2 1654 29.5
Lj7A591T75 Lonicera japonica HOM05D003353 ORTHO05D003751 6.6e-176 622.5 1426 32.7
Atru.chr6.2192 Acer truncatum HOM05D003353 ORTHO05D003751 2.5e-175 620.5 1820 29.3
HanXRQChr12g0368561 Helianthus annuus HOM05D003353 ORTHO05D003751 1.8e-173 614.4 1533 31.8
Nn4g22812 Nelumbo nucifera HOM05D003353 ORTHO05D003751 9.8e-172 608.6 1649 29.7
QL02p076799 Quercus lobata HOM05D003353 ORTHO05D003751 8.3e-171 605.5 1604 29.7
Haze_14661 Corylus avellana HOM05D003353 ORTHO05D003751 5.4e-170 602.8 1615 30.0
Thecc.04G008000 Theobroma cacao HOM05D003353 ORTHO05D003751 1.6e-169 601.3 1598 30.0
Lsat_1_v5_gn_8_157680 Lactuca sativa HOM05D003353 ORTHO05D003751 2.7e-169 600.5 1491 31.0
Manes.15G182800 Manihot esculenta HOM05D003353 ORTHO05D003751 1.5e-167 594.7 1610 29.6
Prupe.3G283100 Prunus persica HOM05D003353 ORTHO05D003751 3.3e-167 593.6 1766 29.3
Lalb_Chr21g0319411 Lupinus albus HOM05D003353 ORTHO05D003751 1.8e-165 587.8 1724 29.0
ECA233G2073 Erigeron canadensis HOM05D003353 ORTHO05D003751 3.1e-165 587.0 1539 30.6
Cfa007435 Carpinus fangiana HOM05D003353 ORTHO05D003751 1.2e-164 585.1 1622 29.7
FAN02G2799 Fragaria x ananassa HOM05D003353 ORTHO05D003751 1.2e-164 585.1 1525 30.3
FvH4_6g50560 Fragaria vesca HOM05D003353 ORTHO05D003751 1.5e-164 584.7 1528 29.9
FAN09G4608 Fragaria x ananassa HOM05D003353 ORTHO05D003751 2.0e-164 584.3 1526 30.3
Gorai.006G029600 Gossypium raimondii HOM05D003353 ORTHO05D003751 2.6e-164 583.9 1579 29.7
Gohir.A09G026000 Gossypium hirsutum HOM05D003353 ORTHO05D003751 4.4e-164 583.2 1588 30.0
Glyma.13G170000 Glycine max HOM05D003353 ORTHO05D003751 9.8e-164 582.0 1723 28.4
Sed0022584 Sechium edule HOM05D003353 ORTHO05D003751 9.8e-164 582.0 1576 29.5
Gohir.D09G025300 Gossypium hirsutum HOM05D003353 ORTHO05D003751 1.3e-163 581.6 1579 29.5
Ciclev10030471m.g Citrus clementina HOM05D003353 ORTHO05D003751 1.7e-163 581.3 1721 29.4
FAN14G4206 Fragaria x ananassa HOM05D003353 ORTHO05D003751 1.7e-163 581.3 1528 29.7
Actinidia15041 Actinidia chinensis HOM05D003353 ORTHO05D003751 4.9e-163 579.7 950 37.7
COL.COLO4_28936 Corchorus olitorius HOM05D003353 ORTHO05D003751 8.3e-163 578.9 1561 29.7
CiPaw.03G037100 Carya illinoinensis HOM05D003353 ORTHO05D003751 2.4e-162 577.4 1607 29.0
TWI12G0214 Tripterygium wilfordii HOM05D003353 ORTHO05D003751 2.4e-162 577.4 1595 29.2
Glyma.19G010200 Glycine max HOM05D003353 ORTHO05D003751 7.0e-162 575.9 1758 28.6
MD17G1035500 Malus domestica HOM05D003353 ORTHO05D003751 1.2e-161 575.1 1654 30.4
THA.LOC104822384 Tarenaya hassleriana HOM05D003353 ORTHO05D003751 1.2e-161 575.1 1503 30.9
Atru.chr11.2012 Acer truncatum HOM05D003353 ORTHO05D003751 6.0e-161 572.8 1631 29.2
MD09G1035200 Malus domestica HOM05D003353 ORTHO05D003751 1.7e-160 571.2 1756 28.6
RcHm_v2.0_Chr2g0171081 Rosa chinensis HOM05D003353 ORTHO05D003751 1.7e-160 571.2 1557 29.9
Sabra17G0060500 Salix brachista HOM05D003353 ORTHO05D003751 2.3e-160 570.9 1723 28.4
VMungo0464G0152 Vigna mungo HOM05D003353 ORTHO05D003751 3.9e-160 570.1 1582 29.0
GSVIVG01032492001 Vitis vinifera HOM05D003353 ORTHO05D003751 1.9e-159 567.8 1456 30.6
CANSAT64G0328 Cannabis sativa HOM05D003353 ORTHO05D003751 2.5e-159 567.4 1572 29.1
TWI36G0997 Tripterygium wilfordii HOM05D003353 ORTHO05D003751 3.3e-159 567.0 1602 29.2
Phvul.004G017600 Phaseolus vulgaris HOM05D003353 ORTHO05D003751 4.3e-159 566.6 1733 28.0
CiPaw.04G024200 Carya illinoinensis HOM05D003353 ORTHO05D003751 7.3e-159 565.8 1586 29.5
GSVIVG01020232001 Vitis vinifera HOM05D003353 ORTHO05D003751 7.3e-159 565.8 1438 31.1
Lalb_Chr06g0176091 Lupinus albus HOM05D003353 ORTHO05D003751 9.5e-159 565.5 1551 29.7
CsaV3_3G042270 Cucumis sativus L. HOM05D003353 ORTHO05D003751 6.2e-158 562.8 1554 29.7
Lj2g0012220 Lotus japonicus HOM05D003353 ORTHO05D003751 1.8e-157 561.2 1602 28.0
Cfa009137 Carpinus fangiana HOM05D003353 ORTHO05D003751 3.7e-155 553.5 1718 28.5
QL03p061451 Quercus lobata HOM05D003353 ORTHO05D003751 3.7e-155 553.5 1658 29.0
AL3G10710 Arabidopsis lyrata HOM05D003353 ORTHO05D003751 1.1e-154 552.0 1717 27.8
Medtr6g007650 Medicago truncatula HOM05D003353 ORTHO05D003751 2.4e-154 550.8 1661 27.8
Hund12469 Selenicereus undatus HOM05D003353 ORTHO05D003751 2.4e-154 550.8 1597 27.8
Haze_12169 Corylus avellana HOM05D003353 ORTHO05D003751 7.1e-154 549.3 1776 28.0
Duzib147G1510 Durio zibethinus HOM05D003353 ORTHO05D003751 2.7e-153 547.4 1586 29.0
AT3G01460 Arabidopsis thaliana HOM05D003353 ORTHO05D003751 3.5e-153 547.0 1535 28.5
PGR142G1415 Punica granatum HOM05D003353 ORTHO05D003751 3.9e-152 543.5 1562 28.9
Psat1g059480 Pisum sativum HOM05D003353 ORTHO05D003751 1.1e-151 542.0 1617 28.3
ClCG10G014330 Citrullus lanatus HOM05D003353 ORTHO05D003751 4.3e-151 540.0 1552 28.9
TPR.G2281 Trifolium pratense HOM05D003353 ORTHO05D003751 4.3e-151 540.0 1566 28.6
Carub.0003s0064 Capsella rubella HOM05D003353 ORTHO05D003751 5.6e-151 539.7 1547 28.7
Aa31LG5G10560 Aethionema arabicum HOM05D003353 ORTHO05D003751 2.1e-150 537.7 1535 28.5
Thhalv10019872m.g Eutrema salsugineum HOM05D003353 ORTHO05D003751 3.6e-150 537.0 1531 28.2
EL10Ac2g03352 Beta vulgaris HOM05D003353 ORTHO05D003751 6.2e-150 536.2 1611 28.3
Eucgr.I01818 Eucalyptus grandis HOM05D003353 ORTHO05D003751 1.1e-149 535.4 1582 28.2
Sp3g00610 Schrenkiella parvula HOM05D003353 ORTHO05D003751 6.8e-149 532.7 1527 28.9
BcaB04g21418 Brassica carinata HOM05D003353 ORTHO05D003751 3.4e-148 530.4 1666 27.0
MELO3C009946.2 Cucumis melo HOM05D003353 ORTHO05D003751 2.9e-147 527.3 1699 28.5
Aqoxy3G02993 Aquilegia oxysepala HOM05D003353 ORTHO05D003751 8.4e-147 525.8 1471 29.4
PSO832G1186 Papaver somniferum HOM05D003353 ORTHO05D003751 2.7e-145 520.8 1610 28.6
BcaC09g47659 Brassica carinata HOM05D003353 ORTHO05D003751 7.8e-145 519.2 1690 27.2
A05p44550 Brassica napus HOM05D003353 ORTHO05D003751 7.8e-145 519.2 1521 28.3
BraA05t23202Z Brassica rapa HOM05D003353 ORTHO05D003751 7.8e-145 519.2 1521 28.3
Rhsim10G0023100 Rhododendron simsii HOM05D003353 ORTHO05D003751 2.3e-144 517.7 1354 30.2
AUR62042408 Chenopodium quinoa HOM05D003353 ORTHO05D003751 6.6e-144 516.2 1607 27.1
BolC5t35150H Brassica oleracea HOM05D003353 ORTHO05D003751 7.3e-143 512.7 1540 28.1
BolC1t05958H Brassica oleracea HOM05D003353 ORTHO05D003751 9.6e-143 512.3 1751 26.6
BraA01t04666Z Brassica rapa HOM05D003353 ORTHO05D003751 9.6e-143 512.3 1741 26.8
C09p75140 Brassica napus HOM05D003353 ORTHO05D003751 1.6e-142 511.5 1540 28.1
ATR0691G050 Amborella trichopoda HOM05D003353 ORTHO05D003751 2.4e-141 507.7 1667 27.1
BNapus_Darmor_BZH_scaffold_119p00030 Brassica napus HOM05D003353 ORTHO05D003751 4.9e-139 500.0 1399 28.3
BNapus_Darmor_BZH_scaffold_97p00400 Brassica napus HOM05D003353 ORTHO05D003751 4.9e-139 500.0 1399 28.3
AUR62032109 Chenopodium quinoa HOM05D003353 ORTHO05D003751 6.4e-139 499.6 1639 26.7
HanXRQChr17g0569791 Helianthus annuus HOM05D003353 ORTHO05D003751 1.1e-138 498.8 1307 29.5
CDE10G0339 Ceratophyllum demersum HOM05D003353 ORTHO05D003751 1.6e-137 495.0 1438 28.8
DCAR_007093 Daucus carota HOM05D003353 ORTHO05D003751 4.6e-137 493.4 950 35.2
PSO063G6215 Papaver somniferum HOM05D003353 ORTHO05D003751 6.0e-137 493.0 1510 28.0
Lsat_1_v5_gn_4_6960 Lactuca sativa HOM05D003353 ORTHO05D003751 1.2e-132 478.8 1167 30.2
DCAR_021679 Daucus carota HOM05D003353 ORTHO05D003751 1.3e-131 475.3 1474 27.5
Lalb_Chr02g0160231 Lupinus albus HOM05D003353 ORTHO05D003751 3.8e-131 473.8 1039 32.4
Ciclev10014026m.g Citrus clementina HOM05D003353 ORTHO05D003751 9.3e-130 469.2 1188 30.3
HPP92_008854 Vanilla planifolia HOM05D003353 ORTHO05D003751 3.5e-129 467.2 1067 31.7
ECA199G0007 Erigeron canadensis HOM05D003353 ORTHO05D003751 1.1e-127 462.2 1321 28.4
Actinidia06029 Actinidia chinensis HOM05D003353 ORTHO05D003751 5.6e-127 459.9 1134 32.1
CSS0024625 Camellia sinensis var. sinensis HOM05D003353 ORTHO05D003751 2.7e-121 441.0 971 32.5
Sc06g0001590 Simmondsia chinensis HOM05D003353 ORTHO05D003751 3.0e-120 437.6 1162 29.6
Zm00001eb206240 Zea mays HOM05D003353 ORTHO05D003751 3.7e-118 430.6 1296 28.1
SHI25551 Sapria himalayana HOM05D003353 ORTHO05D003751 4.9e-115 420.2 898 33.4
SEGI_35053 Sequoiadendron giganteum HOM05D003353 ORTHO05D003751 2.5e-114 417.9 1297 27.5
Ah.16g106640 Amaranthus hybridus HOM05D003353 ORTHO05D003751 7.1e-114 416.4 1197 28.1
arahy.Tifrunner.gnm1.ann1.S45US4 Arachis hypogaea HOM05D003353 ORTHO05D003751 1.9e-111 408.3 1488 26.2
Thhalv10022520m.g Eutrema salsugineum HOM05D003353 ORTHO05D003751 1.4e-109 402.1 917 31.5
Dinv35053 Davidia involucrata HOM05D003353 ORTHO05D003751 3.2e-106 391.0 836 34.1
Lsat_1_v5_gn_4_182161 Lactuca sativa HOM05D003353 ORTHO05D003751 2.0e-95 355.1 1057 29.3
Lsat_1_v5_gn_4_181301 Lactuca sativa HOM05D003353 ORTHO05D003751 3.3e-95 354.4 1052 29.8
CSS0024289 Camellia sinensis var. sinensis HOM05D003353 ORTHO05D003751 9.1e-93 346.3 727 33.8
Potri.017G072460 Populus trichocarpa HOM05D003353 ORTHO05D003751 8.5e-91 339.7 774 32.3
Actinidia13514 Actinidia chinensis HOM05D003353 ORTHO05D003751 1.3e-86 325.9 1269 26.0
CSS0016548 Camellia sinensis var. sinensis HOM05D003353 ORTHO05D003751 4.2e-74 284.3 598 34.4
Aqoxy3G00985 Aquilegia oxysepala HOM05D003353 ORTHO05D003751 4.7e-73 280.8 859 29.2
BNapus_Darmor_BZH_scaffold_133p00020 Brassica napus HOM05D003353 ORTHO05D003751 1.1e-69 269.6 972 26.4
vmacro05815 Vaccinium macrocarpon HOM05D003353 ORTHO05D003751 3.2e-66 258.1 511 34.4
ECA232G4683 Erigeron canadensis HOM05D003353 ORTHO05D003751 7.7e-60 236.9 707 29.7
Potri.017G072580 Populus trichocarpa HOM05D003353 ORTHO05D003751 1.7e-59 235.7 733 28.0
HanXRQChr09g0266041 Helianthus annuus HOM05D003353 ORTHO05D003751 3.8e-59 234.6 781 27.4
Nn4g22008 Nelumbo nucifera HOM05D003353 ORTHO05D003751 6.6e-59 233.8 734 28.5
CARHR075500 Cardamine hirsuta HOM05D003353 ORTHO05D003751 1.5e-58 232.6 620 29.2
Pp3c6_8120 Physcomitrium patens HOM05D003353 ORTHO05D003751 1.0e-56 226.5 357 38.9
Pp3c5_19640 Physcomitrium patens HOM05D003353 ORTHO05D003751 1.2e-55 223.0 357 38.7
AagrBONN_evm.TU.Sc2ySwM_228.4332 Anthoceros agrestis HOM05D003353 ORTHO05D003751 2.6e-55 221.9 387 37.0
Mapoly0064s0056 Marchantia polymorpha HOM05D003353 ORTHO05D003751 1.7e-54 219.2 364 36.8
Dinv35052 Davidia involucrata HOM05D003353 ORTHO05D003751 6.4e-54 217.2 580 29.3
Migut.H00131 Erythranthe guttata HOM05D003353 ORTHO05D003751 1.2e-52 213.0 736 29.6
Migut.H00129 Erythranthe guttata HOM05D003353 ORTHO05D003751 1.3e-51 209.5 706 30.0
Lsat_1_v5_gn_4_181221 Lactuca sativa HOM05D003353 ORTHO05D003751 1.1e-50 206.5 677 30.0
Migut.H00132 Erythranthe guttata HOM05D003353 ORTHO05D003751 1.5e-50 206.1 635 30.6
Pp3c2_35750 Physcomitrium patens HOM05D003353 ORTHO05D003751 2.3e-48 198.7 377 34.0
Pp3c1_860 Physcomitrium patens HOM05D003353 ORTHO05D003751 4.0e-48 198.0 367 34.9
CSS0032060 Camellia sinensis var. sinensis HOM05D003353 ORTHO05D003751 5.8e-47 194.1 572 28.8
Cpa.g.sc215.7 Carica papaya HOM05D003353 ORTHO05D003751 1.2e-41 176.4 546 27.5
TPR.G2296 Trifolium pratense HOM05D003353 ORTHO05D003751 4.9e-30 137.9 213 38.0
Actinidia15042 Actinidia chinensis HOM05D003353 ORTHO05D003751 6.4e-30 137.5 384 31.2
Cpa.g.sc215.4 Carica papaya HOM05D003353 ORTHO05D003751 2.4e-29 135.6 580 24.0
vmacro05816 Vaccinium macrocarpon HOM05D003353 ORTHO05D003751 5.6e-26 124.4 314 31.5
PSO732G0719 Papaver somniferum HOM05D001944 ORTHO05D002405 8.1e-25 120.6 69 78.3
Lalb_Chr14g0362821 Lupinus albus HOM05D003353 ORTHO05D003751 1.4e-24 119.8 111 55.0
Sc06g0000060 Simmondsia chinensis HOM05D003353 ORTHO05D003751 3.1e-24 118.6 586 23.0
Lalb_Chr14g0362801 Lupinus albus HOM05D003353 ORTHO05D003751 5.2e-24 117.9 99 58.6
Os02g0192400 Oryza sativa ssp. japonica HOM05D003353 ORTHO05D003751 2.6e-23 115.5 564 24.3
Lalb_Chr02g0160051 Lupinus albus HOM05D003353 ORTHO05D003751 2.9e-22 112.1 385 28.6
Lalb_Chr02g0160241 Lupinus albus HOM05D003353 ORTHO05D003751 2.1e-20 105.9 375 28.5
arahy.Tifrunner.gnm1.ann1.50RNEG Arachis hypogaea HOM05D003353 ORTHO05D003751 1.3e-19 103.2 399 26.1
SEGI_30620 Sequoiadendron giganteum HOM05D004258 ORTHO05D005163 9.6e-18 97.1 244 29.1
Lalb_Chr02g0160041 Lupinus albus HOM05D003353 ORTHO05D003751 1.4e-16 93.2 61 72.1
SEGI_17891 Sequoiadendron giganteum HOM05D004258 ORTHO05D005163 4.9e-14 84.7 260 27.7
SEGI_07426 Sequoiadendron giganteum HOM05D004258 ORTHO05D005163 6.7e-11 74.3 225 27.1
SHI25550 Sapria himalayana HOM05D003353 ORTHO05D003751 8.7e-11 73.9 150 30.0
MBI03_g13503_MAGBIO Magnolia biondii HOM05D004258 ORTHO05D005163 8.1e-09 67.4 219 28.3
Sc06g0001600 Simmondsia chinensis HOM05D003353 ORTHO05D003751 4.0e-08 65.1 78 39.7
MCO03G197 Micromonas commoda HOM05D003353 ORTHO05D003751 7.6e-07 60.8 207 25.6
Zm00001eb356650 Zea mays HOM05D004258 ORTHO05D005163 2.2e-06 59.3 176 26.1
Carub.0001s0467 Capsella rubella HOM05D003353 ORTHO05D003751 8.4e-06 57.4 63 42.9


User provided reference genes

Program Settings