Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6515 Utricularia gibba HOM05D006723 ORTHO05D008194 1.3e-67 259.6 132 100.0
SGA_v2.0_scaffold105G30462 Striga asiatica HOM05D006723 ORTHO05D008194 1.1e-23 113.6 105 58.1
Migut.J01796 Erythranthe guttata HOM05D006723 ORTHO05D008194 5.7e-23 111.3 105 55.2
MSTRG.19888 Avicennia marina HOM05D006723 ORTHO05D008194 9.7e-23 110.5 107 54.2
CiPaw.10G029600 Carya illinoinensis HOM05D006723 ORTHO05D008194 2.4e-21 105.9 109 53.2
QL01p033062 Quercus lobata HOM05D006723 ORTHO05D008194 6.9e-21 104.4 109 51.4
SalBow6G0316 Salvia bowleyana HOM05D006723 ORTHO05D008194 1.2e-20 103.6 107 54.2
Cfa016879 Carpinus fangiana HOM05D006723 ORTHO05D008194 1.5e-20 103.2 127 44.9
QL01p034748 Quercus lobata HOM05D006723 ORTHO05D008194 3.4e-20 102.1 106 52.8
PGR142G2324 Punica granatum HOM05D006723 ORTHO05D008194 7.7e-20 100.9 110 53.6
Glyma.19G143700 Glycine max HOM05D006723 ORTHO05D008194 3.8e-19 98.6 119 51.3
Haze_19924 Corylus avellana HOM05D000001 ORTHO05D008194 5.0e-19 98.2 116 47.4
Nitab4.5_0000603g0090 Nicotiana tabacum HOM05D006723 ORTHO05D008194 6.5e-19 97.8 109 50.5
MELO3C009654.2 Cucumis melo HOM05D006723 ORTHO05D008194 1.1e-18 97.1 91 57.1
ClCG10G017300 Citrullus lanatus HOM05D006723 ORTHO05D008194 2.5e-18 95.9 105 52.4
Gohir.D09G122000 Gossypium hirsutum HOM05D006723 ORTHO05D008194 2.5e-18 95.9 101 49.5
Gorai.006G139700 Gossypium raimondii HOM05D006723 ORTHO05D008194 4.2e-18 95.1 101 48.5
MBI01_g40600_MAGBIO Magnolia biondii HOM05D006723 ORTHO05D008194 4.2e-18 95.1 112 50.0
CsaV3_3G039110 Cucumis sativus L. HOM05D006723 ORTHO05D008194 5.5e-18 94.7 105 50.5
Hma1.2p1_0856F.1_g229130 Hydrangea macrophylla HOM05D006723 ORTHO05D008194 7.2e-18 94.4 78 60.3
Lalb_Chr01g0017581 Lupinus albus HOM05D006723 ORTHO05D008194 7.2e-18 94.4 83 59.0
Gohir.A09G125000 Gossypium hirsutum HOM05D006723 ORTHO05D008194 9.4e-18 94.0 101 47.5
ECA248G1960 Erigeron canadensis HOM05D006723 ORTHO05D008194 1.2e-17 93.6 91 54.9
Sabra16G0055000 Salix brachista HOM05D000001 ORTHO05D008194 1.2e-17 93.6 114 49.1
TWI77G0276 Tripterygium wilfordii HOM05D006723 ORTHO05D008194 2.1e-17 92.8 106 49.1
Thecc.05G165200 Theobroma cacao HOM05D006723 ORTHO05D008194 2.7e-17 92.4 103 51.5
Actinidia09370 Actinidia chinensis HOM05D006723 ORTHO05D008194 4.7e-17 91.7 84 56.0
Peaxi162Scf00285g00214 Petunia axillaris HOM05D006723 ORTHO05D008194 4.7e-17 91.7 93 53.8
VMungo1383G2473 Vigna mungo HOM05D006723 ORTHO05D008194 4.7e-17 91.7 120 47.5
Sed0016384 Sechium edule HOM05D006723 ORTHO05D008194 6.1e-17 91.3 104 50.0
vmacro08024 Vaccinium macrocarpon HOM05D006723 ORTHO05D008194 8.0e-17 90.9 106 45.3
Ca_08490_v3 Cicer arietinum L. HOM05D006723 ORTHO05D008194 1.0e-16 90.5 81 56.8
Ca_30037_v3 Cicer arietinum L. HOM05D006723 ORTHO05D008194 1.0e-16 90.5 81 56.8
Rhsim03G0010800 Rhododendron simsii HOM05D006723 ORTHO05D008194 1.0e-16 90.5 106 51.9
COL.COLO4_28733 Corchorus olitorius HOM05D006723 ORTHO05D008194 1.4e-16 90.1 110 49.1
Potri.016G051200 Populus trichocarpa HOM05D006723 ORTHO05D008194 1.8e-16 89.7 117 44.4
TPR.G4751 Trifolium pratense HOM05D006723 ORTHO05D008194 1.8e-16 89.7 105 48.6
Prupe.7G070000 Prunus persica HOM05D006723 ORTHO05D008194 2.3e-16 89.4 118 46.6
arahy.Tifrunner.gnm1.ann1.T5X6Q2 Arachis hypogaea HOM05D006723 ORTHO05D008194 3.0e-16 89.0 104 51.9
Thhalv10005936m.g Eutrema salsugineum HOM05D006723 ORTHO05D008194 3.0e-16 89.0 107 44.9
CAN.G316.3 Capsicum annuum HOM05D006723 ORTHO05D008194 3.9e-16 88.6 79 54.4
Nitab4.5_0003477g0050 Nicotiana tabacum HOM05D006723 ORTHO05D008194 3.9e-16 88.6 109 45.9
AT3G57790 Arabidopsis thaliana HOM05D006723 ORTHO05D008194 5.2e-16 88.2 107 43.9
Sp7g07890 Schrenkiella parvula HOM05D006723 ORTHO05D008194 6.7e-16 87.8 117 44.4
CSS0009435 Camellia sinensis var. sinensis HOM05D006723 ORTHO05D008194 8.8e-16 87.4 78 57.7
arahy.Tifrunner.gnm1.ann1.L8GYUR Arachis hypogaea HOM05D006723 ORTHO05D008194 1.1e-15 87.0 103 51.5
AUR62024376 Chenopodium quinoa HOM05D006723 ORTHO05D008194 1.1e-15 87.0 111 48.6
Lj1g0026461 Lotus japonicus HOM05D006723 ORTHO05D008194 1.1e-15 87.0 83 55.4
Sopen03g011140 Solanum pennellii HOM05D006723 ORTHO05D008194 1.1e-15 87.0 78 52.6
Cc06_g16430 Coffea canephora HOM05D006723 ORTHO05D008194 1.5e-15 86.7 87 52.9
MD12G1064100 Malus domestica HOM05D006723 ORTHO05D008194 1.5e-15 86.7 117 47.0
Solyc03g051770.2 Solanum lycopersicum HOM05D006723 ORTHO05D008194 1.5e-15 86.7 78 52.6
AL5G39460 Arabidopsis lyrata HOM05D006723 ORTHO05D008194 2.0e-15 86.3 107 43.0
Lju124A34T48 Lonicera japonica HOM05D006723 ORTHO05D008194 2.0e-15 86.3 113 48.7
BolC2t10343H Brassica oleracea HOM05D006723 ORTHO05D008194 2.6e-15 85.9 79 51.9
CANSAT80G0702 Cannabis sativa HOM05D006723 ORTHO05D008194 3.3e-15 85.5 110 48.2
HanXRQChr01g0008611 Helianthus annuus HOM05D006723 ORTHO05D008194 3.3e-15 85.5 112 45.5
Psat3g070520 Pisum sativum HOM05D006723 ORTHO05D008194 3.3e-15 85.5 109 43.1
Eucgr.K01816 Eucalyptus grandis HOM05D006723 ORTHO05D008194 4.4e-15 85.1 82 57.3
TAR633G1569 Trochodendron aralioides HOM05D006723 ORTHO05D008194 4.4e-15 85.1 83 56.6
Carub.0005s2465 Capsella rubella HOM05D006723 ORTHO05D008194 5.7e-15 84.7 124 41.1
Lsat_1_v5_gn_5_163881 Lactuca sativa HOM05D006723 ORTHO05D008194 7.4e-15 84.3 107 46.7
RcHm_v2.0_Chr3g0480761 Rosa chinensis HOM05D006723 ORTHO05D008194 7.4e-15 84.3 79 55.7
Atru.chr1.947 Acer truncatum HOM05D006723 ORTHO05D008194 9.7e-15 84.0 81 55.6
CARHR168110 Cardamine hirsuta HOM05D006723 ORTHO05D008194 9.7e-15 84.0 108 44.4
FvH4_6g22970 Fragaria vesca HOM05D006723 ORTHO05D008194 9.7e-15 84.0 113 48.7
Hund24753 Selenicereus undatus HOM05D006723 ORTHO05D008194 9.7e-15 84.0 111 46.8
EL10Ac3g06984 Beta vulgaris HOM05D006723 ORTHO05D008194 1.3e-14 83.6 107 48.6
A02p27180 Brassica napus HOM05D006723 ORTHO05D008194 1.7e-14 83.2 115 41.7
BraA02t07735Z Brassica rapa HOM05D006723 ORTHO05D008194 1.7e-14 83.2 115 41.7
THA.LOC104802371 Tarenaya hassleriana HOM05D006723 ORTHO05D008194 1.7e-14 83.2 116 44.0
DCAR_013569 Daucus carota HOM05D006723 ORTHO05D008194 2.2e-14 82.8 116 44.8
Nn7g36117 Nelumbo nucifera HOM05D006723 ORTHO05D008194 2.2e-14 82.8 78 53.8
Aqoxy2G00115 Aquilegia oxysepala HOM05D006723 ORTHO05D008194 2.8e-14 82.4 79 59.5
FAN02G4120 Fragaria x ananassa HOM05D006723 ORTHO05D008194 2.8e-14 82.4 114 48.2
HPP92_022789 Vanilla planifolia HOM05D006723 ORTHO05D008194 2.8e-14 82.4 79 58.2
Sc15g0003630 Simmondsia chinensis HOM05D006723 ORTHO05D008194 3.7e-14 82.0 108 44.4
BcaC03g16488 Brassica carinata HOM05D006723 ORTHO05D008194 4.8e-14 81.6 113 44.2
C02p43010 Brassica napus HOM05D006723 ORTHO05D008194 4.8e-14 81.6 113 44.2
AUR62025979 Chenopodium quinoa HOM05D006723 ORTHO05D008194 4.8e-14 81.6 78 55.1
Phvul.001G138000 Phaseolus vulgaris HOM05D006723 ORTHO05D008194 4.8e-14 81.6 80 56.2
Aa31LG10G12530 Aethionema arabicum HOM05D006723 ORTHO05D008194 8.2e-14 80.9 123 38.2
Medtr7g092470 Medicago truncatula HOM05D006723 ORTHO05D008194 1.1e-13 80.5 107 43.9
PGSC0003DMG400012934 Solanum tuberosum HOM05D006723 ORTHO05D008194 1.1e-13 80.5 113 41.6
Manes.08G047500 Manihot esculenta HOM05D006723 ORTHO05D008194 1.4e-13 80.1 108 41.7
Os09g0487600 Oryza sativa ssp. japonica HOM05D006723 ORTHO05D008194 1.8e-13 79.7 101 49.5
Ciclev10004869m.g Citrus clementina HOM05D006723 ORTHO05D008194 3.1e-13 79.0 117 41.0
Ah.04g152030 Amaranthus hybridus HOM05D006723 ORTHO05D008194 4.1e-13 78.6 74 56.8
BcaB04g19408 Brassica carinata HOM05D006723 ORTHO05D008194 7.0e-13 77.8 115 44.3
PSO170G4750 Papaver somniferum HOM05D006723 ORTHO05D008194 7.7e-12 74.3 114 40.4
SMO367G0484 Selaginella moellendorffii HOM05D006723 ORTHO05D008194 2.2e-11 72.8 101 40.6
AagrBONN_evm.TU.Sc2ySwM_344.2360 Anthoceros agrestis HOM05D006723 ORTHO05D008194 8.5e-11 70.9 76 50.0
PSO541G4411 Papaver somniferum HOM05D006723 ORTHO05D008194 1.1e-10 70.5 76 52.6
ATR0605G349 Amborella trichopoda HOM05D006723 ORTHO05D008194 4.7e-09 65.1 111 41.4
CDE07G0652 Ceratophyllum demersum HOM05D006723 ORTHO05D008194 3.0e-08 62.4 77 48.1
CBR_g38954 Chara braunii HOM05D006723 ORTHO05D008194 3.0e-08 62.4 75 48.0
Mapoly0056s0050 Marchantia polymorpha HOM05D006723 ORTHO05D008194 1.5e-07 60.1 76 43.4
Dinv18102 Davidia involucrata HOM05D006723 ORTHO05D008194 4.4e-07 58.5 40 65.0
PSO063G2548 Papaver somniferum HOM05D006723 ORTHO05D008194 4.4e-07 58.5 64 48.4
SMO174G0166 Selaginella moellendorffii HOM05D006723 ORTHO05D008194 4.4e-07 58.5 78 44.9
Pp3c5_16250 Physcomitrium patens HOM05D006723 ORTHO05D008194 5.7e-07 58.2 75 42.7
Nitab4.5_0000116g0280 Nicotiana tabacum HOM05D000338 ORTHO05D000704 8.2e-06 54.3 80 45.0
Nitab4.5_0011943g0010 Nicotiana tabacum HOM05D000338 ORTHO05D000704 8.2e-06 54.3 80 45.0
Pp3c16_9310 Physcomitrium patens HOM05D006723 ORTHO05D008194 8.2e-06 54.3 76 40.8


User provided reference genes

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