Gene: Haze_19924
General Information
Structural Information
- Species Corylus avellana
- Gene Identifier Haze_19924
- Transcript Identifier Haze_19924-RA
- Gene Type Coding gene
- Location 10 : 5660470-5672460 : negative
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D008194
- #Genes/#Species 122/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Haze_19924-RA
Descriptions
- Description Similar to PCMP-H85: Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004650 | IEA | InterPro | polygalacturonase activity | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT3G57790 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR024535 | Pectate lyase superfamily protein |
| IPR000743 | Glycoside hydrolase, family 28 |
| IPR002885 | Pentatricopeptide repeat |
| IPR006626 | Parallel beta-helix repeat |
| IPR012334 | Pectin lyase fold |
| IPR011050 | Pectin lyase fold/virulence factor |
| IPR032867 | DYW domain |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| Mapman id | Description |
|---|---|
| 50.3.2 | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase |