Gene: COL.COLO4_28733

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_28733
  • Transcript Identifier COL.rna27451
  • Gene Type Coding gene
  • Location AWUE01020032.1 : 24585-27929 : negative

Gene Family Information

  • ID HOM05D006723
  • #Genes/#Species 119/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna27451
  • GenBank OMO70169.1
  • id gene28705
  • gene_name COLO4_28733
  • uniprot A0A1R3HIJ3

Descriptions

  • Description Glycoside hydrolase, family 28
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008152
IEA
GOA Databasemetabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004650
IEA
GOA Databasepolygalacturonase activity
GO:0004650
IEA
InterPropolygalacturonase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IEA
GOA Databasecell wall
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G57790

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024535 Pectate lyase superfamily protein
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
IPR006626 Parallel beta-helix repeat
IPR000743 Glycoside hydrolase, family 28
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase