Gene: Sopen03g011140
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g011140
- Transcript Identifier Sopen03g011140.1
- Gene Type Coding gene
- Location Spenn-ch03 : 16177535-16188656 : positive
Gene Family Information
- ID HOM05D006723
- #Genes/#Species 119/93
- Phylogenetic origin
- ID ORTHO05D008194
- #Genes/#Species 122/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen03g011140.1
Descriptions
- Description Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectin lyase fold , Glycoside hydrolase, family 28 | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004650 | IEA | InterPro | polygalacturonase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT3G57790 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 50.3.2 | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase |