Gene: Nitab4.5_0000603g0090

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000603g0090
  • Transcript Identifier Nitab4.5_0000603g0090.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000603 : 852236-862519 : negative

Gene Family Information

  • ID HOM05D006723
  • #Genes/#Species 119/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000603g0090.1
  • SR1-identifier Nta05g02560.2

Descriptions

  • Description Pentatricopeptide repeat, Tetratricopeptide-like helical, Pectin lyase fold, Glycoside hydrolase, family 28, Pectin lyase fold/virulence factor
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004650
IEA
InterPropolygalacturonase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G57790

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024535 Pectate lyase superfamily protein
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR000743 Glycoside hydrolase, family 28
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase