Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_22.g6310 Utricularia gibba HOM05D006183 ORTHO05D007844 1.5e-121 439.5 215 100.0
SGA_v2.0_scaffold1G00669 Striga asiatica HOM05D006183 ORTHO05D007844 2.6e-57 226.1 109 98.2
MSTRG.18360 Avicennia marina HOM05D006183 ORTHO05D007844 7.0e-55 218.0 109 93.6
SalBow4G1671 Salvia bowleyana HOM05D006183 ORTHO05D007844 2.0e-54 216.5 109 90.8
Solyc06g008110.4 Solanum lycopersicum HOM05D006183 ORTHO05D007844 4.6e-54 215.3 109 90.8
Sopen06g002920 Solanum pennellii HOM05D006183 ORTHO05D007844 4.6e-54 215.3 109 90.8
Migut.D00486 Erythranthe guttata HOM05D006183 ORTHO05D007844 1.0e-53 214.2 109 89.9
PGSC0003DMG400014711 Solanum tuberosum HOM05D006183 ORTHO05D007844 1.0e-53 214.2 109 89.9
Nitab4.5_0000326g0320 Nicotiana tabacum HOM05D006183 ORTHO05D007844 5.0e-53 211.8 109 88.1
Cc01_g17710 Coffea canephora HOM05D006183 ORTHO05D007844 1.1e-52 210.7 109 88.1
Nitab4.5_0009671g0010 Nicotiana tabacum HOM05D006183 ORTHO05D007844 1.5e-52 210.3 109 88.1
Oeu015440.1 Olea europaea HOM05D006183 ORTHO05D007844 1.5e-52 210.3 107 90.7
Psat3g051320 Pisum sativum HOM05D006183 ORTHO05D007844 2.1e-51 206.5 109 85.3
Rhsim13G0040400 Rhododendron simsii HOM05D006183 ORTHO05D007844 2.1e-51 206.5 109 83.5
TPR.G20058 Trifolium pratense HOM05D006183 ORTHO05D007844 3.6e-51 205.7 109 85.3
Manes.13G038900 Manihot esculenta HOM05D006183 ORTHO05D007844 4.7e-51 205.3 109 86.2
arahy.Tifrunner.gnm1.ann1.73B1UV Arachis hypogaea HOM05D006183 ORTHO05D007844 6.2e-51 204.9 109 84.4
arahy.Tifrunner.gnm1.ann1.P69TYL Arachis hypogaea HOM05D006183 ORTHO05D007844 6.2e-51 204.9 109 84.4
Duzib133G1169 Durio zibethinus HOM05D006183 ORTHO05D007844 6.2e-51 204.9 109 85.3
Glyma.19G169500 Glycine max HOM05D006183 ORTHO05D007844 6.2e-51 204.9 109 83.5
HanXRQChr03g0066991 Helianthus annuus HOM05D006183 ORTHO05D007844 6.2e-51 204.9 107 86.0
Lalb_Chr20g0113511 Lupinus albus HOM05D006183 ORTHO05D007844 6.2e-51 204.9 109 82.6
vmacro02713 Vaccinium macrocarpon HOM05D006183 ORTHO05D007844 6.2e-51 204.9 109 84.4
Dinv43057 Davidia involucrata HOM05D006183 ORTHO05D007844 8.0e-51 204.5 109 85.3
Eucgr.K01415 Eucalyptus grandis HOM05D006183 ORTHO05D007844 1.4e-50 203.8 107 86.0
Lj1A75T45 Lonicera japonica HOM05D006183 ORTHO05D007844 1.4e-50 203.8 107 85.0
Sabra14G0143600 Salix brachista HOM05D006183 ORTHO05D007844 1.8e-50 203.4 109 83.5
EL10Ac7g17706 Beta vulgaris HOM05D006183 ORTHO05D007844 2.3e-50 203.0 109 84.4
CsaV3_3G028460 Cucumis sativus L. HOM05D006183 ORTHO05D007844 2.3e-50 203.0 107 86.9
GSVIVG01028442001 Vitis vinifera HOM05D006183 ORTHO05D007844 2.3e-50 203.0 109 83.5
CSS0020724 Camellia sinensis var. sinensis HOM05D006183 ORTHO05D007844 3.1e-50 202.6 107 85.0
ClCG07G001450 Citrullus lanatus HOM05D006183 ORTHO05D007844 3.1e-50 202.6 107 86.0
MELO3C012834.2 Cucumis melo HOM05D006183 ORTHO05D007844 3.1e-50 202.6 107 86.0
ECA248G2561 Erigeron canadensis HOM05D006183 ORTHO05D007844 4.0e-50 202.2 107 85.0
QL09p042323 Quercus lobata HOM05D006183 ORTHO05D007844 4.0e-50 202.2 109 83.5
Medtr7g098900 Medicago truncatula HOM05D006183 ORTHO05D007844 5.2e-50 201.8 109 83.5
Cfa002493 Carpinus fangiana HOM05D006183 ORTHO05D007844 6.8e-50 201.4 109 84.4
Haze_24717 Corylus avellana HOM05D006183 ORTHO05D007844 6.8e-50 201.4 109 84.4
Lsat_1_v5_gn_5_180141 Lactuca sativa HOM05D006183 ORTHO05D007844 6.8e-50 201.4 107 83.2
Lj1g0002370 Lotus japonicus HOM05D006183 ORTHO05D007844 6.8e-50 201.4 107 84.1
Prupe.8G213600 Prunus persica HOM05D006183 ORTHO05D007844 6.8e-50 201.4 109 81.7
Atru.chr5.1959 Acer truncatum HOM05D006183 ORTHO05D007844 8.9e-50 201.1 109 83.5
Ca_08753_v3 Cicer arietinum L. HOM05D006183 ORTHO05D007844 1.2e-49 200.7 109 82.6
MD10G1174900 Malus domestica HOM05D006183 ORTHO05D007844 1.2e-49 200.7 109 81.7
PGR044G1356 Punica granatum HOM05D006183 ORTHO05D007844 1.2e-49 200.7 109 80.7
Hund18298 Selenicereus undatus HOM05D006183 ORTHO05D007844 1.5e-49 200.3 109 82.6
FAN27G0957 Fragaria x ananassa HOM05D006183 ORTHO05D007844 2.0e-49 199.9 109 82.6
FAN15G0492 Fragaria x ananassa HOM05D006183 ORTHO05D007844 3.4e-49 199.1 109 81.7
Peaxi162Scf00499g00067 Petunia axillaris HOM05D006183 ORTHO05D007844 3.4e-49 199.1 109 85.3
Sc17g0002990 Simmondsia chinensis HOM05D006183 ORTHO05D007844 3.4e-49 199.1 109 81.7
Thecc.01G248600 Theobroma cacao HOM05D006183 ORTHO05D007844 3.4e-49 199.1 109 82.6
Aqoxy5G00112 Aquilegia oxysepala HOM05D006183 ORTHO05D007844 4.4e-49 198.7 109 80.7
Ciclev10019299m.g Citrus clementina HOM05D006183 ORTHO05D007844 4.4e-49 198.7 109 82.6
Os10g0464100 Oryza sativa ssp. japonica HOM05D006183 ORTHO05D007844 4.4e-49 198.7 107 82.2
DCAR_018527 Daucus carota HOM05D006183 ORTHO05D007844 5.8e-49 198.4 107 81.3
Gohir.D07G209800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 5.8e-49 198.4 109 83.5
Gorai.001G237200 Gossypium raimondii HOM05D006183 ORTHO05D007844 5.8e-49 198.4 109 83.5
VMungo1383G1346 Vigna mungo HOM05D006183 ORTHO05D007844 5.8e-49 198.4 109 81.7
Hma1.2p1_2051F.1_g312550 Hydrangea macrophylla HOM05D006183 ORTHO05D007844 7.5e-49 198.0 109 81.7
Gohir.A07G203800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 9.8e-49 197.6 109 83.5
Phvul.001G166600 Phaseolus vulgaris HOM05D006183 ORTHO05D007844 1.3e-48 197.2 109 81.7
MBI10_g16795_MAGBIO Magnolia biondii HOM05D006183 ORTHO05D007844 1.7e-48 196.8 109 81.7
CiPaw.04G191000 Carya illinoinensis HOM05D006183 ORTHO05D007844 2.2e-48 196.4 109 81.7
CDE02G0751 Ceratophyllum demersum HOM05D006183 ORTHO05D007844 2.2e-48 196.4 109 78.9
Potri.014G193500 Populus trichocarpa HOM05D006183 ORTHO05D007844 2.2e-48 196.4 109 82.6
FvH4_2g20290 Fragaria vesca HOM05D006183 ORTHO05D007844 2.9e-48 196.1 109 80.7
FAN24G0209 Fragaria x ananassa HOM05D006183 ORTHO05D007844 2.9e-48 196.1 109 80.7
AUR62008815 Chenopodium quinoa HOM05D006183 ORTHO05D007844 3.7e-48 195.7 109 78.9
Zm00001eb222270 Zea mays HOM05D006183 ORTHO05D007844 3.7e-48 195.7 107 81.3
TAR636G3003 Trochodendron aralioides HOM05D006183 ORTHO05D007844 4.9e-48 195.3 109 79.8
Cpa.g.sc87.44 Carica papaya HOM05D006183 ORTHO05D007844 6.4e-48 194.9 109 80.7
RcHm_v2.0_Chr6g0286091 Rosa chinensis HOM05D006183 ORTHO05D007844 6.4e-48 194.9 109 80.7
THA.LOC104814536 Tarenaya hassleriana HOM05D006183 ORTHO05D007844 6.4e-48 194.9 109 79.8
C07p00800 Brassica napus HOM05D006183 ORTHO05D007844 1.1e-47 194.1 109 81.7
BraA07t27830Z Brassica rapa HOM05D006183 ORTHO05D007844 1.1e-47 194.1 109 81.7
Sed0027453 Sechium edule HOM05D006183 ORTHO05D007844 1.4e-47 193.7 109 83.5
AUR62025425 Chenopodium quinoa HOM05D006183 ORTHO05D007844 1.9e-47 193.4 109 78.9
A07p00380 Brassica napus HOM05D006183 ORTHO05D007844 2.4e-47 193.0 109 80.7
AL3G53280 Arabidopsis lyrata HOM05D006183 ORTHO05D007844 3.2e-47 192.6 109 79.8
ATR0751G065 Amborella trichopoda HOM05D006183 ORTHO05D007844 4.1e-47 192.2 109 77.1
BcaC06g36716 Brassica carinata HOM05D006183 ORTHO05D007844 4.1e-47 192.2 109 80.7
BolC7t40519H Brassica oleracea HOM05D006183 ORTHO05D007844 4.1e-47 192.2 109 80.7
Thhalv10001927m.g Eutrema salsugineum HOM05D006183 ORTHO05D007844 4.1e-47 192.2 109 80.7
Carub.0003s3467 Capsella rubella HOM05D006183 ORTHO05D007844 7.0e-47 191.4 107 80.4
AT2G20330 Arabidopsis thaliana HOM05D006183 ORTHO05D007844 9.2e-47 191.0 109 78.9
BcaB03g16820 Brassica carinata HOM05D006183 ORTHO05D007844 9.2e-47 191.0 109 78.9
CARHR110860 Cardamine hirsuta HOM05D006183 ORTHO05D007844 9.2e-47 191.0 109 78.9
Sp3g33570 Schrenkiella parvula HOM05D006183 ORTHO05D007844 1.2e-46 190.7 107 81.3
PSO210G4577 Papaver somniferum HOM05D006183 ORTHO05D007844 2.7e-46 189.5 107 77.6
SEGI_33423 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 1.0e-45 187.6 109 74.3
HPP92_025390 Vanilla planifolia HOM05D006183 ORTHO05D007844 1.1e-44 184.1 109 76.1
Aa31LG8G17320 Aethionema arabicum HOM05D006183 ORTHO05D007844 2.5e-44 183.0 107 77.6
BcaNung04798 Brassica carinata HOM05D006183 ORTHO05D007844 4.3e-44 182.2 111 77.5
C09p15190 Brassica napus HOM05D006183 ORTHO05D007844 4.3e-44 182.2 111 77.5
BolC9t54425H Brassica oleracea HOM05D006183 ORTHO05D007844 4.3e-44 182.2 111 77.5
Lj1A75T44 Lonicera japonica HOM05D006183 ORTHO05D007844 3.6e-43 179.1 108 74.1
Rhsim08G0025400 Rhododendron simsii HOM05D006183 ORTHO05D007844 4.7e-43 178.7 116 70.7
Mapoly0020s0160 Marchantia polymorpha HOM05D006183 ORTHO05D007844 3.1e-42 176.0 109 74.3
SMO117G0187 Selaginella moellendorffii HOM05D006183 ORTHO05D007844 3.4e-41 172.6 107 72.0
AagrBONN_evm.TU.Sc2ySwM_228.230 Anthoceros agrestis HOM05D006183 ORTHO05D007844 1.7e-40 170.2 109 69.7
Actinidia37559 Actinidia chinensis HOM05D006183 ORTHO05D007844 2.1e-38 163.3 87 80.5
Pp3c3_26410 Physcomitrium patens HOM05D006183 ORTHO05D007844 2.7e-38 162.9 106 67.9
CBR_g29722 Chara braunii HOM05D006183 ORTHO05D007844 1.9e-36 156.8 108 67.6
SHI26778 Sapria himalayana HOM05D006183 ORTHO05D007844 2.1e-35 153.3 109 70.6
COL.COLO4_20954 Corchorus olitorius HOM05D006183 ORTHO05D007844 2.8e-35 152.9 82 84.1
Cre04.g217750 Chlamydomonas reinhardtii HOM05D006183 ORTHO05D007844 1.4e-15 87.4 106 44.3
MCO16G174 Micromonas commoda HOM05D006183 ORTHO05D007844 2.1e-14 83.6 115 40.9
SHI26811 Sapria himalayana HOM05D006183 ORTHO05D007844 4.6e-14 82.4 43 86.0
HPP92_028272 Vanilla planifolia HOM05D006183 ORTHO05D007844 3.4e-09 66.2 39 71.8
MD05G1186900 Malus domestica HOM05D006183 ORTHO05D007844 4.5e-09 65.9 183 30.6
Actinidia30118 Actinidia chinensis HOM05D006183 ORTHO05D007844 3.8e-08 62.8 35 71.4


User provided reference genes

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