Gene: Pp3c3_26410

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c3_26410
  • Transcript Identifier Pp3c3_26410V3.3
  • Gene Type Coding gene
  • Location Chr03 : 18066067-18070371 : negative

Gene Family Information

  • ID HOM05D006183
  • #Genes/#Species 128/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c3_26410V3.3
  • pacid 32940612
  • alias Pp1s351_43V6
  • alias Phpat.003G104100
  • alias Phypa_199066
  • uniprot A0A2K1KW75

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1903775
IBA
GOA Databaseregulation of DNA double-strand break processing
GO:2001173
IBA
GOA Databaseregulation of histone H2B conserved C-terminal lysine ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035861
IBA
GOA Databasesite of double-strand break
GO:0005634
IBA
GOA Databasenucleus
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT2G20330

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
Mapman id Description
19.2.2.8.3.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.substrate adaptor (OZS3)